RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 FMNL3Q8IVF7 1028 aa16.4■□□□□ 0.22
RPRD1A-208ENST00000589050 PABPC5Q96DU9 382 aaKnown RBP16.4■□□□□ 0.22
RPRD1A-208ENST00000589050 SFXN1Q9H9B4 322 aa16.4■□□□□ 0.22
RPRD1A-208ENST00000589050 HESX1Q9UBX0 185 aa16.4■□□□□ 0.22
RPRD1A-208ENST00000589050 TSPAN16Q9UKR8 245 aa16.4■□□□□ 0.22
RPRD1A-208ENST00000589050 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.4■□□□□ 0.22
RPRD1A-208ENST00000589050 LUC7L2Q9Y383 392 aaKnown RBP16.4■□□□□ 0.22
RPRD1A-208ENST00000589050 TBX10O75333 385 aa16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 RFPL2O75678 378 aa16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 FERP16591 822 aa16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 ANXA13P27216 316 aa16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 GPR15P49685 360 aa16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 CACNA2D1P54289 1103 aa16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 RPL10AP62906 217 aaKnown RBP16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 TWF1Q12792 350 aa16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 PLD1Q13393 1074 aa16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 CNGA2Q16280 664 aa16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 ASIC2Q16515 512 aa16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 DDR2Q16832 855 aa16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 SFMBT2Q5VUG0 894 aa16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 LCLAT1Q6UWP7 414 aa16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 DRC7Q8IY82 874 aa16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 C12orf76Q8N812 135 aaPredicted RBP16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 ZNF606Q8WXB4 792 aa16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 NUCKS1Q9H1E3 243 aaKnown RBP16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 DMAP1Q9NPF5 467 aaPredicted RBP16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 ZDHHC7Q9NXF8 308 aa16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 CLEC1BQ9P126 229 aa16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 PLXNA3P51805 1871 aa16.39■□□□□ 0.21
RPRD1A-208ENST00000589050 F8VP50 259 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 M0QYV0 167 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 TRIM66O15016 1216 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 CCL16O15467 120 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 MICAL2O94851 1124 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 HNRNPA1P09651 372 aaKnown RBP eCLIP16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 CCDC172P0C7W6 258 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 ATF6P18850 670 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 CDC25BP30305 580 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 HOXA9P31269 272 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 KRT9P35527 623 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 BCAT1P54687 386 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 MAP3K7CLP57077 242 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 SLC8A3P57103 927 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 DLX2Q07687 328 aaPredicted RBP16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 TBX2Q13207 712 aaPredicted RBP16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 GSE1Q14687 1217 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 RARS2Q5T160 578 aaKnown RBP16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 SDHAF4Q5VUM1 108 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 TAF3Q5VWG9 929 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 CLEC20AQ6ZU45 233 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 NOP9Q86U38 636 aaKnown RBP16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 TTC30AQ86WT1 665 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 ANKRD52Q8NB46 1076 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 MAFAQ8NHW3 353 aaPredicted RBP16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 UBA3Q8TBC4 463 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 GPR152Q8TDT2 470 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 EPS8L1Q8TE68 723 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 GIPC2Q8TF65 315 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 C8orf48Q96LL4 319 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 KCNK16Q96T55 309 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 SMOQ99835 787 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 APOL5Q9BWW9 433 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 DUSP16Q9BY84 665 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 TMEM30AQ9NV96 361 aa16.38■□□□□ 0.21
RPRD1A-208ENST00000589050 CCDC195A0A1B0GUA6 201 aa16.37■□□□□ 0.21
RPRD1A-208ENST00000589050 BEST1O76090 585 aa16.37■□□□□ 0.21
RPRD1A-208ENST00000589050 NPR3P17342 541 aa16.37■□□□□ 0.21
RPRD1A-208ENST00000589050 HOXB8P17481 243 aaPredicted RBP16.37■□□□□ 0.21
RPRD1A-208ENST00000589050 LTBRP36941 435 aa16.37■□□□□ 0.21
RPRD1A-208ENST00000589050 MRE11P49959 708 aa16.37■□□□□ 0.21
RPRD1A-208ENST00000589050 EPHB3P54753 998 aa16.37■□□□□ 0.21
RPRD1A-208ENST00000589050 BST2Q10589 180 aaKnown RBP16.37■□□□□ 0.21
RPRD1A-208ENST00000589050 VEPH1Q14D04 833 aa16.37■□□□□ 0.21
RPRD1A-208ENST00000589050 E4F1Q66K89 784 aaPredicted RBP16.37■□□□□ 0.21
RPRD1A-208ENST00000589050 DENND1BQ6P3S1 775 aa16.37■□□□□ 0.21
RPRD1A-208ENST00000589050 SYCE2Q6PIF2 218 aa16.37■□□□□ 0.21
RPRD1A-208ENST00000589050 TMC5Q6UXY8 1006 aa16.37■□□□□ 0.21
RPRD1A-208ENST00000589050 ELMOD1Q8N336 334 aa16.37■□□□□ 0.21
RPRD1A-208ENST00000589050 SLC20A1Q8WUM9 679 aa16.37■□□□□ 0.21
RPRD1A-208ENST00000589050 PDCL3Q9H2J4 239 aa16.37■□□□□ 0.21
RPRD1A-208ENST00000589050 CSNK1G1Q9HCP0 422 aa16.37■□□□□ 0.21
RPRD1A-208ENST00000589050 AIPL1Q9NZN9 384 aa16.37■□□□□ 0.21
RPRD1A-208ENST00000589050 NOCTQ9UK39 431 aaKnown RBP16.37■□□□□ 0.21
RPRD1A-208ENST00000589050 CDH23Q9H251 3354 aa16.37■□□□□ 0.21
RPRD1A-208ENST00000589050 AKR1B15C9JRZ8 316 aaPredicted RBP16.36■□□□□ 0.21
RPRD1A-208ENST00000589050 MFAP3LO75121 409 aa16.36■□□□□ 0.21
RPRD1A-208ENST00000589050 XYLBO75191 536 aa16.36■□□□□ 0.21
RPRD1A-208ENST00000589050 MMEP08473 750 aa16.36■□□□□ 0.21
RPRD1A-208ENST00000589050 CFHP08603 1231 aa16.36■□□□□ 0.21
RPRD1A-208ENST00000589050 SETSIPP0DME0 302 aa16.36■□□□□ 0.21
RPRD1A-208ENST00000589050 ADKP55263 362 aaKnown RBP16.36■□□□□ 0.21
RPRD1A-208ENST00000589050 PDE4CQ08493 712 aa16.36■□□□□ 0.21
RPRD1A-208ENST00000589050 GOLGA8FQ08AF8 430 aa16.36■□□□□ 0.21
RPRD1A-208ENST00000589050 GOLGA8DPQ0D2H9 430 aa16.36■□□□□ 0.21
RPRD1A-208ENST00000589050 TAF12Q16514 161 aa16.36■□□□□ 0.21
RPRD1A-208ENST00000589050 IRF2BP2Q7Z5L9 587 aa16.36■□□□□ 0.21
RPRD1A-208ENST00000589050 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.36■□□□□ 0.21
RPRD1A-208ENST00000589050 ZNF677Q86XU0 584 aa16.36■□□□□ 0.21
RPRD1A-208ENST00000589050 PASD1Q8IV76 773 aa16.36■□□□□ 0.21
RPRD1A-208ENST00000589050 STKLD1Q8NE28 680 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms