RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 CTAGE8P0CG41 777 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 DESP17661 470 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 COMTP21964 271 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 MAN1A1P33908 653 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 SCNN1AP37088 669 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 TSPY1Q01534 308 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 YWHAHQ04917 246 aaPredicted RBP11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 PDE4CQ08493 712 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 PDCLQ13371 301 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 PPIGQ13427 754 aaKnown RBP eCLIP11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 DSG2Q14126 1118 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 ACAP1Q15027 740 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 TCTN1Q2MV58 587 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 PTPN20Q4JDL3 420 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 OR6B2Q6IFH4 312 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 CTAGE6Q86UF2 777 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 CTAGE4Q8IX94 777 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 DCP1BQ8IZD4 617 aaKnown RBP11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 LRRC43Q8N309 656 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 SLC2A14Q8TDB8 520 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 FNIP1Q8TF40 1166 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 RABGGTAQ92696 567 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 TOP1MTQ969P6 601 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 TRIM43Q96BQ3 446 aaPredicted RBP11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 MCRS1Q96EZ8 462 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 CPXM1Q96SM3 734 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 DPEP3Q9H4B8 488 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 IL23AQ9NPF7 189 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 CACNG4Q9UBN1 327 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 ADAM28Q9UKQ2 775 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 NME7Q9Y5B8 376 aa11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 TIMM13Q9Y5L4 95 aaPredicted RBP11.08□□□□□ -0.64
CHMP1B-202ENST00000588284 TDRD15B5MCY1 1934 aaKnown RBP11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 MYH10P35580 1976 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 TCRBV5S1A1TA0A578 114 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 TMEM110-MUSTN1A8MSY1 372 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 EFCAB8A8MWE9 144 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 H7C4K7 107 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 KCNK3O14649 394 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 XPO1O14980 1071 aaKnown RBP11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 NCK2O43639 380 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 UPP2O95045 317 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 FGBP02675 491 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 GALTP07902 379 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 FAM200BP0CF97 657 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 CSF2RAP15509 400 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 EN2P19622 333 aaPredicted RBP11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 ACAT1P24752 427 aaKnown RBP11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 CTNNA2P26232 953 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 ADORA2BP29275 332 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 GTF2F1P35269 517 aaKnown RBP eCLIP11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 CETN2P41208 172 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 RPL34P49207 117 aaKnown RBP11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 ALDH7A1P49419 539 aaKnown RBP11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 PAN2Q504Q3 1202 aaKnown RBP11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 MDH1BQ5I0G3 518 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 INTS6LQ5JSJ4 861 aaKnown RBP11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 FAM171BQ6P995 826 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 C4orf50Q6ZRC1 276 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 UBE2Q1Q7Z7E8 422 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 PHLDB2Q86SQ0 1253 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 TTC30AQ86WT1 665 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 XYLT1Q86Y38 959 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 FUKQ8N0W3 1084 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 KCTD13Q8WZ19 329 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 UBXN4Q92575 508 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 NAP1L3Q99457 506 aaPredicted RBP11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 B3GNT5Q9BYG0 378 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 CARD9Q9H257 536 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 DNAJB4Q9UDY4 337 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 CYTH4Q9UIA0 394 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 PRG3Q9Y2Y8 225 aaPredicted RBP11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 PCDHA3Q9Y5H8 950 aa11.07□□□□□ -0.64
CHMP1B-202ENST00000588284 TTC3P53804 2025 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 FAM170AA1A519 330 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 MYBPHLA2RUH7 354 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 OR6C75A6NL08 312 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 GOLGA8SH3BPF8 625 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 I3L4J1 428 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 SRGAP2O75044 1071 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 ATP2C2O75185 946 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 ERBB2P04626 1255 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 CCDC130P13994 396 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 NPR3P17342 541 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 IGFBP6P24592 240 aaPredicted RBP11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 PLA2G4AP47712 749 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 SLC11A1P49279 550 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 RWDD2BP57060 319 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 SLC6A3Q01959 620 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 ITIH3Q06033 890 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 SMARCB1Q12824 385 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 NFE2Q16621 373 aaPredicted RBP11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 C2CD6Q53TS8 623 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 EFHC1Q5JVL4 640 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 CYP4A22Q5TCH4 519 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 PMF1Q6P1K2 205 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 ARCQ7LC44 396 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 CREG2Q8IUH2 290 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 RHOT1Q8IXI2 618 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms