RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 KIF9Q9HAQ2 790 aa16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 SEMA4GQ9NTN9 838 aa16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 KBTBD4Q9NVX7 518 aa16.27■□□□□ 0.2
PRKCSH-204ENST00000587290 MYH10P35580 1976 aa16.27■□□□□ 0.19
PRKCSH-204ENST00000587290 SCAMP3O14828 347 aaKnown RBP16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 TGFB1I1O43294 461 aa16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 DLATP10515 647 aaKnown RBP16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 GJA4P35212 333 aa16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 LHX1P48742 406 aa16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 CYP27A1Q02318 531 aa16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 FAM160A1Q05DH4 1040 aa16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 GRSF1Q12849 480 aaKnown RBP eCLIP16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 USP4Q13107 963 aa16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 CFAP221Q4G0U5 840 aa16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 FAM171BQ6P995 826 aa16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 PRR23CQ6ZRP0 262 aa16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 EPM2AIP1Q7L775 607 aaPredicted RBP16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 LIMS2Q7Z4I7 341 aa16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 WDR5BQ86VZ2 330 aa16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 CCDC127Q96BQ5 260 aa16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 MYRFLQ96LU7 910 aa16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 MMS19Q96T76 1030 aa16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 AGPAT3Q9NRZ7 376 aa16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 GCNT4Q9P109 453 aa16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 UXTQ9UBK9 157 aaPredicted RBP16.26■□□□□ 0.19
PRKCSH-204ENST00000587290 TRAV19A0A0A6YYK7 116 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 PRR5-ARHGAP8B1AHC4 643 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 TRDMT1O14717 391 aaKnown RBP16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 CST3P01034 146 aaPredicted RBP16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 GALK1P51570 392 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 CACNA2D1P54289 1103 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 ARHGAP8P85298 464 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 ZXDBP98169 803 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 MYO1EQ12965 1108 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 ZNF268Q14587 947 aaPredicted RBP16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 SNRNP35Q16560 246 aaKnown RBP16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 DUOXA2Q1HG44 320 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 MDH1BQ5I0G3 518 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 FAM26FQ5R3K3 315 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 TRAPPC11Q7Z392 1133 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 SYNPOQ8N3V7 929 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 SH3RF2Q8TEC5 729 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 PCED1BQ96HM7 432 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 BACH2Q9BYV9 841 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 GZF1Q9H116 711 aaPredicted RBP16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 LINC00597Q9H2U6 94 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 DPEP3Q9H4B8 488 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 SMOC1Q9H4F8 434 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 ECT2Q9H8V3 914 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 TMEM30AQ9NV96 361 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 DUS2Q9NX74 493 aaKnown RBP16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 ZMYM5Q9UJ78 669 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 R3HCC1Q9Y3T6 440 aaKnown RBP16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 ABCA7Q8IZY2 2146 aa16.25■□□□□ 0.19
PRKCSH-204ENST00000587290 LAMA1P25391 3075 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 AXIN1O15169 862 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 PPP6R2O75170 966 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 USP17L7P0C7H9 530 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 KCNA4P22459 653 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 GRIK1P39086 918 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 IFNAR2P48551 515 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 CASP4P49662 377 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 PDGFRLQ15198 375 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 SF3A2Q15428 464 aaKnown RBP16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 EML3Q32P44 896 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 STXBP4Q6ZWJ1 553 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 KBTBD6Q86V97 674 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 WDR49Q8IV35 697 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 GRAMD1CQ8IYS0 662 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 CPA6Q8N4T0 437 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 RPLP0P6Q8NHW5 317 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 OSCP1Q8WVF1 389 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 SCFD1Q8WVM8 642 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 FUBP3Q96I24 572 aaKnown RBP eCLIP16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 P2RY13Q9BPV8 354 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 RXFP3Q9NSD7 469 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 MAGEC2Q9UBF1 373 aaPredicted RBP16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 CDH9Q9ULB4 789 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 NUP205Q92621 2012 aa16.24■□□□□ 0.19
PRKCSH-204ENST00000587290 ACACBO00763 2458 aa16.23■□□□□ 0.19
PRKCSH-204ENST00000587290 CACNA1BQ00975 2339 aa16.23■□□□□ 0.19
PRKCSH-204ENST00000587290 CLDN5O00501 218 aa16.23■□□□□ 0.19
PRKCSH-204ENST00000587290 KIAA0391O15091 583 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-204ENST00000587290 EIF3DO15371 548 aaKnown RBP eCLIP16.23■□□□□ 0.19
PRKCSH-204ENST00000587290 POLR2DO15514 142 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-204ENST00000587290 RPP40O75818 363 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-204ENST00000587290 TNNI1P19237 187 aa16.23■□□□□ 0.19
PRKCSH-204ENST00000587290 WARSP23381 471 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-204ENST00000587290 CNR2P34972 360 aa16.23■□□□□ 0.19
PRKCSH-204ENST00000587290 MAGEA11P43364 429 aa16.23■□□□□ 0.19
PRKCSH-204ENST00000587290 CYP24A1Q07973 514 aa16.23■□□□□ 0.19
PRKCSH-204ENST00000587290 IFRD2Q12894 506 aaPredicted RBP16.23■□□□□ 0.19
PRKCSH-204ENST00000587290 PSMD2Q13200 908 aa16.23■□□□□ 0.19
PRKCSH-204ENST00000587290 KCNB1Q14721 858 aa16.23■□□□□ 0.19
PRKCSH-204ENST00000587290 CSRP2Q16527 193 aa16.23■□□□□ 0.19
PRKCSH-204ENST00000587290 C4orf50Q6ZRC1 276 aa16.23■□□□□ 0.19
PRKCSH-204ENST00000587290 HS2ST1Q7LGA3 356 aa16.23■□□□□ 0.19
PRKCSH-204ENST00000587290 SPATA18Q8TC71 538 aa16.23■□□□□ 0.19
PRKCSH-204ENST00000587290 ZNF507Q8TCN5 953 aa16.23■□□□□ 0.19
PRKCSH-204ENST00000587290 ZNF516Q92618 1163 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms