RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 OSCP1Q8WVF1 389 aa20.73■□□□□ 0.91
TRAF4-216ENST00000586813 CYP2S1Q96SQ9 504 aa20.73■□□□□ 0.91
TRAF4-216ENST00000586813 P2RY13Q9BPV8 354 aa20.73■□□□□ 0.91
TRAF4-216ENST00000586813 SYT15Q9BQS2 421 aa20.73■□□□□ 0.91
TRAF4-216ENST00000586813 ZSCAN16Q9H4T2 348 aaPredicted RBP20.73■□□□□ 0.91
TRAF4-216ENST00000586813 ECT2Q9H8V3 914 aa20.73■□□□□ 0.91
TRAF4-216ENST00000586813 DUS2Q9NX74 493 aaKnown RBP20.73■□□□□ 0.91
TRAF4-216ENST00000586813 GDF9O60383 454 aa20.72■□□□□ 0.91
TRAF4-216ENST00000586813 GALK1P51570 392 aa20.72■□□□□ 0.91
TRAF4-216ENST00000586813 STK38Q15208 465 aa20.72■□□□□ 0.91
TRAF4-216ENST00000586813 SURF1Q15526 300 aa20.72■□□□□ 0.91
TRAF4-216ENST00000586813 DUOXA2Q1HG44 320 aa20.72■□□□□ 0.91
TRAF4-216ENST00000586813 FSIP1Q8NA03 581 aa20.72■□□□□ 0.91
TRAF4-216ENST00000586813 ATP2A3Q93084 1043 aa20.72■□□□□ 0.91
TRAF4-216ENST00000586813 MYLPFQ96A32 169 aa20.72■□□□□ 0.91
TRAF4-216ENST00000586813 EXOC4Q96A65 974 aa20.72■□□□□ 0.91
TRAF4-216ENST00000586813 KBTBD4Q9NVX7 518 aa20.72■□□□□ 0.91
TRAF4-216ENST00000586813 HSPBP1Q9NZL4 362 aa20.72■□□□□ 0.91
TRAF4-216ENST00000586813 GCNT4Q9P109 453 aa20.72■□□□□ 0.91
TRAF4-216ENST00000586813 CDH9Q9ULB4 789 aa20.72■□□□□ 0.91
TRAF4-216ENST00000586813 WNT6Q9Y6F9 365 aa20.72■□□□□ 0.91
TRAF4-216ENST00000586813 C2orf78A6NCI8 922 aa20.71■□□□□ 0.91
TRAF4-216ENST00000586813 LMO2P25791 158 aa20.71■□□□□ 0.91
TRAF4-216ENST00000586813 HOXD13P35453 343 aa20.71■□□□□ 0.91
TRAF4-216ENST00000586813 IFNAR2P48551 515 aa20.71■□□□□ 0.91
TRAF4-216ENST00000586813 KCNB1Q14721 858 aa20.71■□□□□ 0.91
TRAF4-216ENST00000586813 E2F4Q16254 413 aa20.71■□□□□ 0.91
TRAF4-216ENST00000586813 FBXO43Q4G163 708 aa20.71■□□□□ 0.91
TRAF4-216ENST00000586813 CACNA2D4Q7Z3S7 1137 aa20.71■□□□□ 0.91
TRAF4-216ENST00000586813 WDR49Q8IV35 697 aa20.71■□□□□ 0.91
TRAF4-216ENST00000586813 ARL14EPQ8N8R7 260 aaPredicted RBP20.71■□□□□ 0.91
TRAF4-216ENST00000586813 LINC00301Q8NCQ3 95 aa20.71■□□□□ 0.91
TRAF4-216ENST00000586813 LOXL4Q96JB6 756 aa20.71■□□□□ 0.91
TRAF4-216ENST00000586813 CNTNAP3BQ96NU0 1288 aa20.71■□□□□ 0.91
TRAF4-216ENST00000586813 CNTNAP3Q9BZ76 1288 aa20.71■□□□□ 0.91
TRAF4-216ENST00000586813 TRIM9Q9C026 710 aa20.71■□□□□ 0.91
TRAF4-216ENST00000586813 LRRC27Q9C0I9 530 aa20.71■□□□□ 0.91
TRAF4-216ENST00000586813 CRTAC1Q9NQ79 661 aa20.71■□□□□ 0.91
TRAF4-216ENST00000586813 FOXD4L1Q9NU39 408 aa20.71■□□□□ 0.91
TRAF4-216ENST00000586813 POLR3BQ9NW08 1133 aaPredicted RBP20.71■□□□□ 0.91
TRAF4-216ENST00000586813 MAGEC2Q9UBF1 373 aaPredicted RBP20.71■□□□□ 0.91
TRAF4-216ENST00000586813 AXIN1O15169 862 aa20.7■□□□□ 0.9
TRAF4-216ENST00000586813 EIF3DO15371 548 aaKnown RBP eCLIP20.7■□□□□ 0.9
TRAF4-216ENST00000586813 STX6O43752 255 aa20.7■□□□□ 0.9
TRAF4-216ENST00000586813 AKAP3O75969 853 aa20.7■□□□□ 0.9
TRAF4-216ENST00000586813 CCDC192P0DO97 292 aa20.7■□□□□ 0.9
TRAF4-216ENST00000586813 MAPRE1Q15691 268 aaKnown RBP20.7■□□□□ 0.9
TRAF4-216ENST00000586813 EML3Q32P44 896 aa20.7■□□□□ 0.9
TRAF4-216ENST00000586813 PPM1JQ5JR12 505 aa20.7■□□□□ 0.9
TRAF4-216ENST00000586813 VSTM1Q6UX27 236 aa20.7■□□□□ 0.9
TRAF4-216ENST00000586813 KBTBD6Q86V97 674 aa20.7■□□□□ 0.9
TRAF4-216ENST00000586813 CAMKK1Q8N5S9 505 aa20.7■□□□□ 0.9
TRAF4-216ENST00000586813 SH3RF2Q8TEC5 729 aa20.7■□□□□ 0.9
TRAF4-216ENST00000586813 CD101Q93033 1021 aa20.7■□□□□ 0.9
TRAF4-216ENST00000586813 SPATA17Q96L03 361 aa20.7■□□□□ 0.9
TRAF4-216ENST00000586813 HHIPQ96QV1 700 aa20.7■□□□□ 0.9
TRAF4-216ENST00000586813 CUEDC2Q9H467 287 aa20.7■□□□□ 0.9
TRAF4-216ENST00000586813 KIAA1586Q9HCI6 787 aa20.7■□□□□ 0.9
TRAF4-216ENST00000586813 SDK1Q7Z5N4 2213 aa20.7■□□□□ 0.9
TRAF4-216ENST00000586813 EPN2O95208 641 aa20.69■□□□□ 0.9
TRAF4-216ENST00000586813 ADRB1P08588 477 aa20.69■□□□□ 0.9
TRAF4-216ENST00000586813 TCF3P15923 654 aa20.69■□□□□ 0.9
TRAF4-216ENST00000586813 WARSP23381 471 aaKnown RBP20.69■□□□□ 0.9
TRAF4-216ENST00000586813 BDNFP23560 247 aa20.69■□□□□ 0.9
TRAF4-216ENST00000586813 RAP1GAPP47736 663 aa20.69■□□□□ 0.9
TRAF4-216ENST00000586813 CYP27A1Q02318 531 aa20.69■□□□□ 0.9
TRAF4-216ENST00000586813 EPM2AIP1Q7L775 607 aaPredicted RBP20.69■□□□□ 0.9
TRAF4-216ENST00000586813 RPLP0P6Q8NHW5 317 aa20.69■□□□□ 0.9
TRAF4-216ENST00000586813 EZH1Q92800 747 aaPredicted RBP20.69■□□□□ 0.9
TRAF4-216ENST00000586813 PCED1BQ96HM7 432 aa20.69■□□□□ 0.9
TRAF4-216ENST00000586813 CEP295NLQ96MC4 621 aa20.69■□□□□ 0.9
TRAF4-216ENST00000586813 ARRDC1-AS1Q9H2J1 176 aa20.69■□□□□ 0.9
TRAF4-216ENST00000586813 ARHGAP26Q9UNA1 814 aa20.69■□□□□ 0.9
TRAF4-216ENST00000586813 SPTLC2O15270 562 aa20.68■□□□□ 0.9
TRAF4-216ENST00000586813 PPP6R2O75170 966 aa20.68■□□□□ 0.9
TRAF4-216ENST00000586813 PDGFRBP09619 1106 aa20.68■□□□□ 0.9
TRAF4-216ENST00000586813 HDCP19113 662 aa20.68■□□□□ 0.9
TRAF4-216ENST00000586813 GRIK1P39086 918 aa20.68■□□□□ 0.9
TRAF4-216ENST00000586813 PDE6CP51160 858 aa20.68■□□□□ 0.9
TRAF4-216ENST00000586813 ASIC1P78348 528 aa20.68■□□□□ 0.9
TRAF4-216ENST00000586813 SF3A2Q15428 464 aaKnown RBP20.68■□□□□ 0.9
TRAF4-216ENST00000586813 CCDC6Q16204 474 aa20.68■□□□□ 0.9
TRAF4-216ENST00000586813 SNRNP35Q16560 246 aaKnown RBP20.68■□□□□ 0.9
TRAF4-216ENST00000586813 AASDHQ4L235 1098 aaPredicted RBP20.68■□□□□ 0.9
TRAF4-216ENST00000586813 DENND5BQ6ZUT9 1274 aa20.68■□□□□ 0.9
TRAF4-216ENST00000586813 SYT13Q7L8C5 426 aa20.68■□□□□ 0.9
TRAF4-216ENST00000586813 TRAPPC11Q7Z392 1133 aa20.68■□□□□ 0.9
TRAF4-216ENST00000586813 ZNF507Q8TCN5 953 aa20.68■□□□□ 0.9
TRAF4-216ENST00000586813 DHX58Q96C10 678 aa20.68■□□□□ 0.9
TRAF4-216ENST00000586813 MMS19Q96T76 1030 aa20.68■□□□□ 0.9
TRAF4-216ENST00000586813 AGPAT3Q9NRZ7 376 aa20.68■□□□□ 0.9
TRAF4-216ENST00000586813 TGFB1I1O43294 461 aa20.67■□□□□ 0.9
TRAF4-216ENST00000586813 DLATP10515 647 aaKnown RBP20.67■□□□□ 0.9
TRAF4-216ENST00000586813 PFKLP17858 780 aa20.67■□□□□ 0.9
TRAF4-216ENST00000586813 ANXA13P27216 316 aa20.67■□□□□ 0.9
TRAF4-216ENST00000586813 USP46P62068 366 aa20.67■□□□□ 0.9
TRAF4-216ENST00000586813 AMPD3Q01432 767 aa20.67■□□□□ 0.9
TRAF4-216ENST00000586813 FAM26FQ5R3K3 315 aa20.67■□□□□ 0.9
TRAF4-216ENST00000586813 CNNM4Q6P4Q7 775 aa20.67■□□□□ 0.9
TRAF4-216ENST00000586813 C12orf50Q8NA57 414 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms