RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 SOWAHAQ2M3V2 549 aa17.13■□□□□ 0.33
ATG4D-205ENST00000586477 TPGS2Q68CL5 300 aa17.13■□□□□ 0.33
ATG4D-205ENST00000586477 SCARA5Q6ZMJ2 495 aa17.13■□□□□ 0.33
ATG4D-205ENST00000586477 RTL10Q7L3V2 364 aa17.13■□□□□ 0.33
ATG4D-205ENST00000586477 DRC7Q8IY82 874 aa17.13■□□□□ 0.33
ATG4D-205ENST00000586477 PDCL2Q8N4E4 241 aa17.13■□□□□ 0.33
ATG4D-205ENST00000586477 TATDN2Q93075 761 aa17.13■□□□□ 0.33
ATG4D-205ENST00000586477 RPP25Q9BUL9 199 aaKnown RBP17.13■□□□□ 0.33
ATG4D-205ENST00000586477 STK33Q9BYT3 514 aa17.13■□□□□ 0.33
ATG4D-205ENST00000586477 GANQ9H2C0 597 aa17.13■□□□□ 0.33
ATG4D-205ENST00000586477 IGSF9Q9P2J2 1179 aa17.13■□□□□ 0.33
ATG4D-205ENST00000586477 AFF4Q9UHB7 1163 aaKnown RBP17.13■□□□□ 0.33
ATG4D-205ENST00000586477 L1RE1Q9UN81 338 aa17.13■□□□□ 0.33
ATG4D-205ENST00000586477 POLIQ9UNA4 740 aa17.13■□□□□ 0.33
ATG4D-205ENST00000586477 DUSP12Q9UNI6 340 aa17.13■□□□□ 0.33
ATG4D-205ENST00000586477 OR6C75A6NL08 312 aa17.12■□□□□ 0.33
ATG4D-205ENST00000586477 GNL1P36915 607 aaPredicted RBP17.12■□□□□ 0.33
ATG4D-205ENST00000586477 BPIFB4P59827 614 aa17.12■□□□□ 0.33
ATG4D-205ENST00000586477 TSPY1Q01534 308 aa17.12■□□□□ 0.33
ATG4D-205ENST00000586477 MAPRE1Q15691 268 aaKnown RBP17.12■□□□□ 0.33
ATG4D-205ENST00000586477 TSR1Q2NL82 804 aaKnown RBP17.12■□□□□ 0.33
ATG4D-205ENST00000586477 WSCD1Q658N2 575 aa17.12■□□□□ 0.33
ATG4D-205ENST00000586477 IQCEQ6IPM2 695 aa17.12■□□□□ 0.33
ATG4D-205ENST00000586477 RRAGAQ7L523 313 aa17.12■□□□□ 0.33
ATG4D-205ENST00000586477 ARHGEF19Q8IW93 802 aa17.12■□□□□ 0.33
ATG4D-205ENST00000586477 SLC44A3Q8N4M1 653 aa17.12■□□□□ 0.33
ATG4D-205ENST00000586477 OR6B3Q8NGW1 331 aa17.12■□□□□ 0.33
ATG4D-205ENST00000586477 OR10T2Q8NGX3 314 aa17.12■□□□□ 0.33
ATG4D-205ENST00000586477 FGF13Q92913 245 aa17.12■□□□□ 0.33
ATG4D-205ENST00000586477 FGF14Q92915 247 aa17.12■□□□□ 0.33
ATG4D-205ENST00000586477 NT5C1AQ9BXI3 368 aa17.12■□□□□ 0.33
ATG4D-205ENST00000586477 SMYD3Q9H7B4 428 aa17.12■□□□□ 0.33
ATG4D-205ENST00000586477 CYP4F11Q9HBI6 524 aa17.12■□□□□ 0.33
ATG4D-205ENST00000586477 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.12■□□□□ 0.332e-45■■■■■ 353
ATG4D-205ENST00000586477 CISHQ9NSE2 258 aa17.12■□□□□ 0.33
ATG4D-205ENST00000586477 IMPACTQ9P2X3 320 aa17.12■□□□□ 0.33
ATG4D-205ENST00000586477 CDH7Q9ULB5 785 aa17.12■□□□□ 0.33
ATG4D-205ENST00000586477 KIAA1257Q9ULG3 409 aa17.12■□□□□ 0.33
ATG4D-205ENST00000586477 LUC7L2Q9Y383 392 aaKnown RBP17.12■□□□□ 0.33
ATG4D-205ENST00000586477 COL4A3Q01955 1670 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 A8MXQ7 604 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 PRRG1O14668 218 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 GABRDO14764 452 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 RHOP08100 348 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 CCR2P41597 374 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 STAT1P42224 750 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 SMARCB1Q12824 385 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 ARHGAP44Q17R89 818 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 PABPC1LQ4VXU2 614 aaKnown RBP17.11■□□□□ 0.33
ATG4D-205ENST00000586477 PRSS36Q5K4E3 855 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 PARM1Q6UWI2 310 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 TMC6Q7Z403 805 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 CNGA4Q8IV77 575 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 NPAS3Q8IXF0 933 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 TTC9BQ8N6N2 239 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 PRSS33Q8NF86 280 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 SHC3Q92529 594 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 TCEAL4Q96EI5 215 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 ACBD6Q9BR61 282 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 NAA15Q9BXJ9 866 aaKnown RBP17.11■□□□□ 0.33
ATG4D-205ENST00000586477 AVENQ9NQS1 362 aaPredicted RBP17.11■□□□□ 0.33
ATG4D-205ENST00000586477 DDX43Q9NXZ2 648 aaKnown RBP17.11■□□□□ 0.33
ATG4D-205ENST00000586477 CDH9Q9ULB4 789 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 CAPN11Q9UMQ6 739 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 FHOD1Q9Y613 1164 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 NUMBLQ9Y6R0 609 aa17.11■□□□□ 0.33
ATG4D-205ENST00000586477 AP5Z1O43299 807 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 LRRN2O75325 713 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 CILPO75339 1184 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 MOSPD3O75425 235 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 NOL4O94818 638 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 PAEPP09466 180 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 KRT5P13647 590 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 CPB1P15086 417 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 NPR3P17342 541 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 CEBPBP17676 345 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 CD58P19256 250 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 AVPR2P30518 371 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 KLK7P49862 253 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 PTPN5P54829 565 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 ZBED6P86452 979 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 GPR17Q13304 367 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 DRAP1Q14919 205 aaPredicted RBP17.1■□□□□ 0.33
ATG4D-205ENST00000586477 DPY19L2P1Q6NXN4 242 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 DCP1BQ8IZD4 617 aaKnown RBP17.1■□□□□ 0.33
ATG4D-205ENST00000586477 HS6ST3Q8IZP7 471 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 KBTBD7Q8WVZ9 684 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 ING5Q8WYH8 240 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 PGLYRP2Q96PD5 576 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 NLRC4Q9NPP4 1024 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 CNTN6Q9UQ52 1028 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 PCDHB4Q9Y5E5 795 aa17.1■□□□□ 0.33
ATG4D-205ENST00000586477 MTMR11A4FU01 709 aa17.09■□□□□ 0.33
ATG4D-205ENST00000586477 F8VZ95 297 aa17.09■□□□□ 0.33
ATG4D-205ENST00000586477 LRG1P02750 347 aa17.09■□□□□ 0.33
ATG4D-205ENST00000586477 ELF1P32519 619 aa17.09■□□□□ 0.33
ATG4D-205ENST00000586477 CDR1P51861 262 aa17.09■□□□□ 0.33
ATG4D-205ENST00000586477 PTK2Q05397 1052 aa17.09■□□□□ 0.33
ATG4D-205ENST00000586477 STILQ15468 1287 aa17.09■□□□□ 0.33
ATG4D-205ENST00000586477 NFE2Q16621 373 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms