RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 ZNHIT6Q9NWK9 470 aaKnown RBP14.44□□□□□ -0.1
VMP1-203ENST00000586245 AIPL1Q9NZN9 384 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 TSPAN16Q9UKR8 245 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.44□□□□□ -0.1
VMP1-203ENST00000586245 TRANK1O15050 2925 aa14.44□□□□□ -0.1
VMP1-203ENST00000586245 M0QYV0 167 aa14.43□□□□□ -0.1
VMP1-203ENST00000586245 TRIM66O15016 1216 aa14.43□□□□□ -0.1
VMP1-203ENST00000586245 MICAL2O94851 1124 aa14.43□□□□□ -0.1
VMP1-203ENST00000586245 LRG1P02750 347 aa14.43□□□□□ -0.1
VMP1-203ENST00000586245 ANXA13P27216 316 aa14.43□□□□□ -0.1
VMP1-203ENST00000586245 GRIK1P39086 918 aa14.43□□□□□ -0.1
VMP1-203ENST00000586245 BCAT1P54687 386 aa14.43□□□□□ -0.1
VMP1-203ENST00000586245 PLD1Q13393 1074 aa14.43□□□□□ -0.1
VMP1-203ENST00000586245 EP400NLQ6ZTU2 488 aa14.43□□□□□ -0.1
VMP1-203ENST00000586245 PAQR9Q6ZVX9 377 aa14.43□□□□□ -0.1
VMP1-203ENST00000586245 ZNF677Q86XU0 584 aa14.43□□□□□ -0.1
VMP1-203ENST00000586245 TTC9BQ8N6N2 239 aa14.43□□□□□ -0.1
VMP1-203ENST00000586245 ANKRD52Q8NB46 1076 aa14.43□□□□□ -0.1
VMP1-203ENST00000586245 SPC24Q8NBT2 197 aa14.43□□□□□ -0.1
VMP1-203ENST00000586245 RHOBTB2Q9BYZ6 727 aa14.43□□□□□ -0.1
VMP1-203ENST00000586245 CRISPLD1Q9H336 500 aa14.43□□□□□ -0.1
VMP1-203ENST00000586245 DMAP1Q9NPF5 467 aaPredicted RBP14.43□□□□□ -0.1
VMP1-203ENST00000586245 IMPACTQ9P2X3 320 aa14.43□□□□□ -0.1
VMP1-203ENST00000586245 YIPF1Q9Y548 306 aa14.43□□□□□ -0.1
VMP1-203ENST00000586245 CEP83Q9Y592 693 aa14.43□□□□□ -0.1
VMP1-203ENST00000586245 INSL5Q9Y5Q6 135 aa14.43□□□□□ -0.1
VMP1-203ENST00000586245 MYO7AQ13402 2215 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 LINC01565O15544 149 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 ZMYND10O75800 440 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 SOAT2O75908 522 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 NPR3P17342 541 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 SSTR3P32745 418 aaPredicted RBP14.42□□□□□ -0.1
VMP1-203ENST00000586245 EPHB3P54753 998 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 ADKP55263 362 aaKnown RBP14.42□□□□□ -0.1
VMP1-203ENST00000586245 MAP3K7CLP57077 242 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 KLHL30Q0D2K2 578 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 BST2Q10589 180 aaKnown RBP14.42□□□□□ -0.1
VMP1-203ENST00000586245 TWF1Q12792 350 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 ADAM15Q13444 863 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 KCNC3Q14003 757 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 VEPH1Q14D04 833 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 CCDC85BQ15834 202 aaPredicted RBP14.42□□□□□ -0.1
VMP1-203ENST00000586245 MEA1Q16626 185 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 DDR2Q16832 855 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 TAF3Q5VWG9 929 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 TMEM184AQ6ZMB5 413 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 IRF2BP2Q7Z5L9 587 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 NOP9Q86U38 636 aaKnown RBP14.42□□□□□ -0.1
VMP1-203ENST00000586245 ELMOD1Q8N336 334 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 VN1R2Q8NFZ6 395 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 UBA3Q8TBC4 463 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 C8orf48Q96LL4 319 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 ZSWIM1Q9BR11 485 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 DUSP16Q9BY84 665 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 SFXN1Q9H9B4 322 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 ABHD10Q9NUJ1 306 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 ZDHHC7Q9NXF8 308 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 CLDND1Q9NY35 253 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 PCDHGC3Q9UN70 934 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 BZW2Q9Y6E2 419 aaKnown RBP14.42□□□□□ -0.1
VMP1-203ENST00000586245 PLXNA3P51805 1871 aa14.42□□□□□ -0.1
VMP1-203ENST00000586245 F8VP50 259 aa14.41□□□□□ -0.1
VMP1-203ENST00000586245 XYLBO75191 536 aa14.41□□□□□ -0.1
VMP1-203ENST00000586245 GLP2RO95838 553 aa14.41□□□□□ -0.1
VMP1-203ENST00000586245 SERPING1P05155 500 aa14.41□□□□□ -0.1
VMP1-203ENST00000586245 HNRNPA1P09651 372 aaKnown RBP eCLIP14.41□□□□□ -0.1
VMP1-203ENST00000586245 SETSIPP0DME0 302 aa14.41□□□□□ -0.1
VMP1-203ENST00000586245 HOXA9P31269 272 aa14.41□□□□□ -0.1
VMP1-203ENST00000586245 PRKCIP41743 596 aa14.41□□□□□ -0.1
VMP1-203ENST00000586245 RBM10P98175 930 aaKnown RBP14.41□□□□□ -0.1
VMP1-203ENST00000586245 CDR2Q01850 454 aa14.41□□□□□ -0.1
VMP1-203ENST00000586245 SKIV2LQ15477 1246 aaKnown RBP14.41□□□□□ -0.1
VMP1-203ENST00000586245 TDRD12Q587J7 1177 aaKnown RBP14.41□□□□□ -0.1
VMP1-203ENST00000586245 E4F1Q66K89 784 aaPredicted RBP14.41□□□□□ -0.1
VMP1-203ENST00000586245 CLEC20AQ6ZU45 233 aa14.41□□□□□ -0.1
VMP1-203ENST00000586245 TTC30AQ86WT1 665 aa14.41□□□□□ -0.1
VMP1-203ENST00000586245 PPM1EQ8WY54 764 aa14.41□□□□□ -0.1
VMP1-203ENST00000586245 PABPC5Q96DU9 382 aaKnown RBP14.41□□□□□ -0.1
VMP1-203ENST00000586245 CEP295NLQ96MC4 621 aa14.41□□□□□ -0.1
VMP1-203ENST00000586245 DNAJC7Q99615 494 aa14.41□□□□□ -0.1
VMP1-203ENST00000586245 SMOQ99835 787 aa14.41□□□□□ -0.1
VMP1-203ENST00000586245 CSNK1G1Q9HCP0 422 aa14.41□□□□□ -0.1
VMP1-203ENST00000586245 NOCTQ9UK39 431 aaKnown RBP14.41□□□□□ -0.1
VMP1-203ENST00000586245 SZT2Q5T011 3432 aa14.41□□□□□ -0.1
VMP1-203ENST00000586245 PRRC2BQ5JSZ5 2229 aaKnown RBP14.41□□□□□ -0.1
VMP1-203ENST00000586245 XPO1O14980 1071 aaKnown RBP14.4□□□□□ -0.1
VMP1-203ENST00000586245 MMEP08473 750 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 SKILP12757 684 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 TNFAIP3P21580 790 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 HNRNPH3P31942 346 aaKnown RBP14.4□□□□□ -0.1
VMP1-203ENST00000586245 GPR15P49685 360 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 CACNA2D1P54289 1103 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 PDE4CQ08493 712 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 GOLGA8FQ08AF8 430 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 GOLGA8DPQ0D2H9 430 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 ARID5BQ14865 1188 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 TAF12Q16514 161 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 CTC1Q2NKJ3 1217 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 SDHAF4Q5VUM1 108 aa14.4□□□□□ -0.1
VMP1-203ENST00000586245 ANKRD54Q6NXT1 300 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms