RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 MSANTD3Q96H12 275 aa11.08□□□□□ -0.64
SMARCA4-209ENST00000586122 GBP4Q96PP9 640 aa11.08□□□□□ -0.64
SMARCA4-209ENST00000586122 NELL2Q99435 816 aa11.08□□□□□ -0.64
SMARCA4-209ENST00000586122 RPP25Q9BUL9 199 aaKnown RBP11.08□□□□□ -0.64
SMARCA4-209ENST00000586122 BRD9Q9H8M2 597 aa11.08□□□□□ -0.64
SMARCA4-209ENST00000586122 KIAA1468Q9P260 1216 aa11.08□□□□□ -0.64
SMARCA4-209ENST00000586122 COQ4Q9Y3A0 265 aa11.08□□□□□ -0.64
SMARCA4-209ENST00000586122 TRIM49BA6NDI0 452 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 HEPACAM2A8MVW5 462 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 PPP1R3GB7ZBB8 358 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 PMM2O15305 246 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 HCRTO43612 131 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 PDGFBP01127 241 aaPredicted RBP11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 GLULP15104 373 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 BDNFP23560 247 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 AVPR1AP37288 418 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 MAGEA9P43362 315 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 PMS1P54277 932 aaKnown RBP11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 PLCB2Q00722 1185 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 FCHO2Q0JRZ9 810 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 CETN1Q12798 172 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 ZNF268Q14587 947 aaPredicted RBP11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 MLF2Q15773 248 aaPredicted RBP11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 ARHGAP29Q52LW3 1261 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 DCAF17Q5H9S7 520 aaPredicted RBP11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 WDR44Q5JSH3 913 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 TCERG1LQ5VWI1 586 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 CWF19L1Q69YN2 538 aaKnown RBP11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 TTI2Q6NXR4 508 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 VITQ6UXI7 678 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 SCARA5Q6ZMJ2 495 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 MON1AQ86VX9 555 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 ARID3BQ8IVW6 561 aaPredicted RBP11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 CELF5Q8N6W0 485 aaKnown RBP11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 FLCNQ8NFG4 579 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 NELFBQ8WX92 580 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 ZSWIM3Q96MP5 696 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 TTLL2Q9BWV7 592 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 OSBPL6Q9BZF3 934 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 TBC1D17Q9HA65 648 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 COMMD8Q9NX08 183 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 RAB20Q9NX57 234 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 CA14Q9ULX7 337 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 MAGED2Q9UNF1 606 aaPredicted RBP11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 MRPS17Q9Y2R5 130 aaKnown RBP11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 NME7Q9Y5B8 376 aa11.07□□□□□ -0.64
SMARCA4-209ENST00000586122 KIF26AQ9ULI4 1882 aaPredicted RBP11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 HELZP42694 1942 aaKnown RBP11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 TICRRQ7Z2Z1 1910 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 KRBA1A5PL33 1030 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 F8VP50 259 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 GOLGA6L22H0YM25 854 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 MAN2B1O00754 1011 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 ZNF263O14978 683 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 CHADO15335 359 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 P4HA2O15460 535 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 RTN3O95197 1032 aaPredicted RBP11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 CD44P16070 742 aaKnown RBP11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 NPR3P17342 541 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 BMP6P22004 513 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 GDI1P31150 447 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 RAP1GAPP47736 663 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 GPR15P49685 360 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 NDST1P52848 882 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 PTPN5P54829 565 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 VCPP55072 806 aaKnown RBP11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 CDH8P55286 799 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 MARSP56192 900 aaKnown RBP11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 YWHAEP62258 255 aaKnown RBP11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 CYP4F8P98187 520 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 CCDC40Q4G0X9 1142 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 SLC44A4Q53GD3 710 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 KLHL10Q6JEL2 608 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 POTEHQ6S545 545 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 TMEM150AQ86TG1 271 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 FAM35AQ86V20 835 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 CMTM8Q8IZV2 173 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 KIAA1958Q8N8K9 716 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 MLKLQ8NB16 471 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 PDZD8Q8NEN9 1154 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 BPIFB1Q8TDL5 484 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 OVCA2Q8WZ82 227 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 SLC35C1Q96A29 364 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 EEF2KMTQ96G04 330 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 SLITRK1Q96PX8 696 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 DDX23Q9BUQ8 820 aaKnown RBP11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 NT5C1AQ9BXI3 368 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 B3GNT5Q9BYG0 378 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 PLA2G2FQ9BZM2 168 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 SDCBP2Q9H190 292 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 DPEP3Q9H4B8 488 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 CLSTN2Q9H4D0 955 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 MMRN2Q9H8L6 949 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 DMAP1Q9NPF5 467 aaPredicted RBP11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 THG1LQ9NWX6 298 aaKnown RBP11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 CTNND2Q9UQB3 1225 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 PATJQ8NI35 1801 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 NCANO14594 1321 aa11.06□□□□□ -0.64
SMARCA4-209ENST00000586122 TRAV19A0A0A6YYK7 116 aa11.05□□□□□ -0.64
SMARCA4-209ENST00000586122 KANSL1LA0AUZ9 987 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms