RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ANKS3Q6ZW76 656 aa13.41□□□□□ -0.26
VMP1-202ENST00000585847 LRRTM3Q86VH5 581 aa13.41□□□□□ -0.26
VMP1-202ENST00000585847 TMEM86AQ8N2M4 240 aa13.41□□□□□ -0.26
VMP1-202ENST00000585847 RBBP8NLQ8NC74 664 aaPredicted RBP13.41□□□□□ -0.26
VMP1-202ENST00000585847 CTNNBL1Q8WYA6 563 aaPredicted RBP13.41□□□□□ -0.26
VMP1-202ENST00000585847 SECISBP2LQ93073 1101 aaKnown RBP13.41□□□□□ -0.26
VMP1-202ENST00000585847 NOX5Q96PH1 765 aa13.41□□□□□ -0.26
VMP1-202ENST00000585847 TWNKQ96RR1 684 aa13.41□□□□□ -0.26
VMP1-202ENST00000585847 MMS19Q96T76 1030 aa13.41□□□□□ -0.26
VMP1-202ENST00000585847 LPIN3Q9BQK8 851 aa13.41□□□□□ -0.26
VMP1-202ENST00000585847 DESI2Q9BSY9 194 aa13.41□□□□□ -0.26
VMP1-202ENST00000585847 MRPL17Q9NRX2 175 aaKnown RBP13.41□□□□□ -0.26
VMP1-202ENST00000585847 TMLHEQ9NVH6 421 aa13.41□□□□□ -0.26
VMP1-202ENST00000585847 HMGXB4Q9UGU5 601 aa13.41□□□□□ -0.26
VMP1-202ENST00000585847 NOCTQ9UK39 431 aaKnown RBP13.41□□□□□ -0.26
VMP1-202ENST00000585847 PCDHB4Q9Y5E5 795 aa13.41□□□□□ -0.26
VMP1-202ENST00000585847 A0A087X0T9 212 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.4□□□□□ -0.26
VMP1-202ENST00000585847 ANKRD62A6NC57 917 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 PER2O15055 1255 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 CLASP2O75122 1294 aaKnown RBP13.4□□□□□ -0.26
VMP1-202ENST00000585847 ATP2C2O75185 946 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 RTN2O75298 545 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 OR4Q2P0C623 313 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 FAM228BP0C875 321 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 TNNT1P13805 278 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 ACAT1P24752 427 aaKnown RBP13.4□□□□□ -0.26
VMP1-202ENST00000585847 GNA15P30679 374 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 HADHBP55084 474 aaKnown RBP13.4□□□□□ -0.26
VMP1-202ENST00000585847 HYAL1Q12794 435 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 DUSP6Q16828 381 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 CTXN3Q4LDR2 81 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 TCEAL5Q5H9L2 206 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 TMEM31Q5JXX7 168 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 SLC8B1Q6J4K2 584 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 KIAA1841Q6NSI8 718 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 LILRA6Q6PI73 481 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 TMEM270Q6UE05 265 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 ACRBPQ8NEB7 543 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 VN1R2Q8NFZ6 395 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 SLC22A17Q8WUG5 538 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 ZCWPW1Q9H0M4 648 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 ISCUQ9H1K1 167 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 DPEP3Q9H4B8 488 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 TRMT1Q9NXH9 659 aaKnown RBP13.4□□□□□ -0.26
VMP1-202ENST00000585847 DDX43Q9NXZ2 648 aaKnown RBP13.4□□□□□ -0.26
VMP1-202ENST00000585847 DSEQ9UL01 958 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 BARX2Q9UMQ3 279 aaPredicted RBP13.4□□□□□ -0.26
VMP1-202ENST00000585847 PCDHGC3Q9UN70 934 aa13.4□□□□□ -0.26
VMP1-202ENST00000585847 REXO2Q9Y3B8 237 aaKnown RBP13.4□□□□□ -0.26
VMP1-202ENST00000585847 WDR27A2RRH5 827 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 H7C4K7 107 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 DDX3XO00571 662 aaKnown RBP eCLIP13.39□□□□□ -0.273e-8■■■□□ 15.8
VMP1-202ENST00000585847 CYP26A1O43174 497 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 CILPO75339 1184 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 PLEKP08567 350 aaPredicted RBP13.39□□□□□ -0.27
VMP1-202ENST00000585847 OR1D2P34982 312 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 RBM10P98175 930 aaKnown RBP13.39□□□□□ -0.27
VMP1-202ENST00000585847 ROR1Q01973 937 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 GFPT1Q06210 699 aaPredicted RBP13.39□□□□□ -0.27
VMP1-202ENST00000585847 RAB33AQ14088 237 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 PTPROQ16827 1216 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 ZNF280DQ6N043 979 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 GLYCTKQ8IVS8 523 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 SYCE1Q8N0S2 351 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 MICAL1Q8TDZ2 1067 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 RFFLQ8WZ73 363 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 TNIP3Q96KP6 325 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 C16orf45Q96MC5 204 aaPredicted RBP13.39□□□□□ -0.27
VMP1-202ENST00000585847 LRFN3Q9BTN0 628 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 NT5C1AQ9BXI3 368 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 ELOVL4Q9GZR5 314 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 PDCL3Q9H2J4 239 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 NSUN3Q9H649 340 aaKnown RBP13.39□□□□□ -0.27
VMP1-202ENST00000585847 EPHX3Q9H6B9 360 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 CRTAC1Q9NQ79 661 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.39□□□□□ -0.27
VMP1-202ENST00000585847 SSX2IPQ9Y2D8 614 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 CDY1Q9Y6F8 540 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 NCANO14594 1321 aa13.39□□□□□ -0.27
VMP1-202ENST00000585847 MYBPHLA2RUH7 354 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 OR6C75A6NL08 312 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 ZNF263O14978 683 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 ABLIM3O94929 683 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 GLP2RO95838 553 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 PDGFRBP09619 1106 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 SETSIPP0DME0 302 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 GNL1P36915 607 aaPredicted RBP13.38□□□□□ -0.27
VMP1-202ENST00000585847 ARHGAP25P42331 645 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 NSFP46459 744 aaKnown RBP13.38□□□□□ -0.27
VMP1-202ENST00000585847 LHX1P48742 406 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 CLCN4P51793 760 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 NDST1P52848 882 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 GNG11P61952 73 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 TUBB4BP68371 445 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 CENPCQ03188 943 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 C1QBPQ07021 282 aaKnown RBP13.38□□□□□ -0.27
VMP1-202ENST00000585847 ORC1Q13415 861 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 COL19A1Q14993 1142 aa13.38□□□□□ -0.27
VMP1-202ENST00000585847 INTS6LQ5JSJ4 861 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms