RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 PDE12Q6L8Q7 609 aaKnown RBP17.92■□□□□ 0.46
HMG20B-215ENST00000585741 PPP1R2P3Q6NXS1 205 aa17.92■□□□□ 0.46
HMG20B-215ENST00000585741 TMEM35BQ8NCS4 154 aa17.92■□□□□ 0.46
HMG20B-215ENST00000585741 MSANTD4Q8NCY6 345 aa17.92■□□□□ 0.46
HMG20B-215ENST00000585741 TFAP2BQ92481 460 aa17.92■□□□□ 0.46
HMG20B-215ENST00000585741 MYLPFQ96A32 169 aa17.92■□□□□ 0.46
HMG20B-215ENST00000585741 TMEM209Q96SK2 561 aa17.92■□□□□ 0.46
HMG20B-215ENST00000585741 LMAN2LQ9H0V9 348 aa17.92■□□□□ 0.46
HMG20B-215ENST00000585741 ABI2Q9NYB9 513 aaPredicted RBP17.92■□□□□ 0.46
HMG20B-215ENST00000585741 ADAMTS1Q9UHI8 967 aa17.92■□□□□ 0.46
HMG20B-215ENST00000585741 NOCTQ9UK39 431 aaKnown RBP17.92■□□□□ 0.46
HMG20B-215ENST00000585741 NME7Q9Y5B8 376 aa17.92■□□□□ 0.46
HMG20B-215ENST00000585741 MYO7AQ13402 2215 aa17.92■□□□□ 0.46
HMG20B-215ENST00000585741 ATG2AQ2TAZ0 1938 aa17.92■□□□□ 0.46
HMG20B-215ENST00000585741 KIAA1671Q9BY89 1806 aa17.91■□□□□ 0.46
HMG20B-215ENST00000585741 SOWAHDA6NJG2 315 aa17.91■□□□□ 0.46
HMG20B-215ENST00000585741 H3BQ06 376 aaPredicted RBP17.91■□□□□ 0.46
HMG20B-215ENST00000585741 O00370 1275 aa17.91■□□□□ 0.46
HMG20B-215ENST00000585741 GRM6O15303 877 aa17.91■□□□□ 0.46
HMG20B-215ENST00000585741 MICAL2O94851 1124 aa17.91■□□□□ 0.46
HMG20B-215ENST00000585741 ADH1AP07327 375 aa17.91■□□□□ 0.46
HMG20B-215ENST00000585741 ELF1P32519 619 aa17.91■□□□□ 0.46
HMG20B-215ENST00000585741 NDUFV1P49821 464 aa17.91■□□□□ 0.46
HMG20B-215ENST00000585741 KIF11P52732 1056 aa17.91■□□□□ 0.46
HMG20B-215ENST00000585741 BCAT1P54687 386 aa17.91■□□□□ 0.46
HMG20B-215ENST00000585741 GPR17Q13304 367 aa17.91■□□□□ 0.46
HMG20B-215ENST00000585741 PTPROQ16827 1216 aa17.91■□□□□ 0.46
HMG20B-215ENST00000585741 FAM171BQ6P995 826 aa17.91■□□□□ 0.46
HMG20B-215ENST00000585741 LCLAT1Q6UWP7 414 aa17.91■□□□□ 0.46
HMG20B-215ENST00000585741 PASD1Q8IV76 773 aa17.91■□□□□ 0.46
HMG20B-215ENST00000585741 C2orf15Q8WU43 125 aaKnown RBP17.91■□□□□ 0.46
HMG20B-215ENST00000585741 PABPC5Q96DU9 382 aaKnown RBP17.91■□□□□ 0.46
HMG20B-215ENST00000585741 SMARCD1Q96GM5 515 aa17.91■□□□□ 0.46
HMG20B-215ENST00000585741 PCED1BQ96HM7 432 aa17.91■□□□□ 0.46
HMG20B-215ENST00000585741 HNRNPABQ99729 332 aaKnown RBP17.91■□□□□ 0.46
HMG20B-215ENST00000585741 LPIN3Q9BQK8 851 aa17.91■□□□□ 0.46
HMG20B-215ENST00000585741 FNIP2Q9P278 1114 aa17.91■□□□□ 0.46
HMG20B-215ENST00000585741 PCDHGC3Q9UN70 934 aa17.91■□□□□ 0.46
HMG20B-215ENST00000585741 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.91■□□□□ 0.46
HMG20B-215ENST00000585741 NLRC5Q86WI3 1866 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 AP1G2O75843 785 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 LSM8O95777 96 aaKnown RBP17.9■□□□□ 0.46
HMG20B-215ENST00000585741 KLRC2P26717 231 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 LTBRP36941 435 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 NSFP46459 744 aaKnown RBP17.9■□□□□ 0.46
HMG20B-215ENST00000585741 SNX16P57768 344 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 ERVFC1P60507 584 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 FMO1Q01740 532 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 BST2Q10589 180 aaKnown RBP17.9■□□□□ 0.46
HMG20B-215ENST00000585741 CCDC122Q5T0U0 273 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 SLC8B1Q6J4K2 584 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 FAM35AQ86V20 835 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 TXLNBQ8N3L3 684 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 ANKRD52Q8NB46 1076 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 UBA3Q8TBC4 463 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 SPPL2BQ8TCT7 592 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 PPP2R3CQ969Q6 453 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 ZNF830Q96NB3 372 aaPredicted RBP17.9■□□□□ 0.46
HMG20B-215ENST00000585741 PGLYRP2Q96PD5 576 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 B3GNT5Q9BYG0 378 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 ZNF518BQ9C0D4 1074 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 SYNCQ9H7C4 482 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 KRT82Q9NSB4 513 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 HCN4Q9Y3Q4 1203 aa17.9■□□□□ 0.46
HMG20B-215ENST00000585741 TMCO5BA8MYB1 307 aa17.89■□□□□ 0.45
HMG20B-215ENST00000585741 CLDN5O00501 218 aa17.89■□□□□ 0.45
HMG20B-215ENST00000585741 SETSIPP0DME0 302 aa17.89■□□□□ 0.45
HMG20B-215ENST00000585741 FECHP22830 423 aa17.89■□□□□ 0.45
HMG20B-215ENST00000585741 BDNFP23560 247 aa17.89■□□□□ 0.45
HMG20B-215ENST00000585741 DEKP35659 375 aaKnown RBP17.89■□□□□ 0.45
HMG20B-215ENST00000585741 GRIK1P39086 918 aa17.89■□□□□ 0.45
HMG20B-215ENST00000585741 CDR1P51861 262 aa17.89■□□□□ 0.45
HMG20B-215ENST00000585741 KRT83P78385 493 aa17.89■□□□□ 0.45
HMG20B-215ENST00000585741 ROR1Q01973 937 aa17.89■□□□□ 0.45
HMG20B-215ENST00000585741 SLC18A3Q16572 532 aa17.89■□□□□ 0.45
HMG20B-215ENST00000585741 CTC1Q2NKJ3 1217 aa17.89■□□□□ 0.45
HMG20B-215ENST00000585741 TPGS2Q68CL5 300 aa17.89■□□□□ 0.45
HMG20B-215ENST00000585741 LRRTM3Q86VH5 581 aa17.89■□□□□ 0.45
HMG20B-215ENST00000585741 SCN4BQ8IWT1 228 aa17.89■□□□□ 0.45
HMG20B-215ENST00000585741 IPO4Q8TEX9 1081 aaKnown RBP17.89■□□□□ 0.45
HMG20B-215ENST00000585741 DDX1Q92499 740 aaKnown RBP17.89■□□□□ 0.45
HMG20B-215ENST00000585741 FUBP3Q96I24 572 aaKnown RBP eCLIP17.89■□□□□ 0.45
HMG20B-215ENST00000585741 CLSTN3Q9BQT9 956 aa17.89■□□□□ 0.45
HMG20B-215ENST00000585741 LHX5Q9H2C1 402 aa17.89■□□□□ 0.45
HMG20B-215ENST00000585741 NSUN3Q9H649 340 aaKnown RBP17.89■□□□□ 0.45
HMG20B-215ENST00000585741 RXFP1Q9HBX9 757 aa17.89■□□□□ 0.45
HMG20B-215ENST00000585741 ST7Q9NRC1 585 aa17.89■□□□□ 0.45
HMG20B-215ENST00000585741 EPN1Q9Y6I3 576 aaPredicted RBP17.89■□□□□ 0.45
HMG20B-215ENST00000585741 C19orf67A6NJJ6 358 aa17.88■□□□□ 0.45
HMG20B-215ENST00000585741 TEX28O15482 410 aa17.88■□□□□ 0.45
HMG20B-215ENST00000585741 TBC1D4O60343 1298 aa17.88■□□□□ 0.45
HMG20B-215ENST00000585741 NDUFA10O95299 355 aa17.88■□□□□ 0.45
HMG20B-215ENST00000585741 NPR3P17342 541 aa17.88■□□□□ 0.45
HMG20B-215ENST00000585741 CHRNB2P17787 502 aa17.88■□□□□ 0.45
HMG20B-215ENST00000585741 GFPT1Q06210 699 aaPredicted RBP17.88■□□□□ 0.45
HMG20B-215ENST00000585741 CLEC16AQ2KHT3 1053 aa17.88■□□□□ 0.45
HMG20B-215ENST00000585741 PUS10Q3MIT2 529 aaKnown RBP17.88■□□□□ 0.45
HMG20B-215ENST00000585741 MGAT5BQ3V5L5 792 aa17.88■□□□□ 0.45
HMG20B-215ENST00000585741 NAA35Q5VZE5 725 aa17.88■□□□□ 0.45
HMG20B-215ENST00000585741 DENND1BQ6P3S1 775 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms