RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 TRIM49BA6NDI0 452 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 GOLGA8JA6NMD2 632 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 LACTBL1A8MY62 500 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 C5orf67F2Z3F1 127 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 CYP26A1O43174 497 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 EXTL3O43909 919 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 LPXNO60711 386 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 SMNDC1O75940 238 aaKnown RBP eCLIP6.11□□□□□ -1.43
CDH8-213ENST00000584966 POMCP01189 267 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 GALTP07902 379 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 CLTAP09496 248 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 CXCL8P10145 99 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 HARSP12081 509 aaKnown RBP6.11□□□□□ -1.43
CDH8-213ENST00000584966 IBSPP21815 317 aaPredicted RBP6.11□□□□□ -1.43
CDH8-213ENST00000584966 MLH1P40692 756 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 CASP4P49662 377 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 SCNN1GP51170 649 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 OSTNP61366 133 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 ERVK-21P61565 698 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 SOX4Q06945 474 aaPredicted RBP6.11□□□□□ -1.43
CDH8-213ENST00000584966 HYAL2Q12891 473 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 CAMK1Q14012 370 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 MYBPC2Q14324 1141 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 NFKBIBQ15653 356 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 CCDC85BQ15834 202 aaPredicted RBP6.11□□□□□ -1.43
CDH8-213ENST00000584966 KLHL40Q2TBA0 621 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 PAN2Q504Q3 1202 aaKnown RBP6.11□□□□□ -1.43
CDH8-213ENST00000584966 NOMO2Q5JPE7 1267 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 C1orf220Q5T0J3 134 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 STXBP4Q6ZWJ1 553 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 TMEM173Q86WV6 379 aaPredicted RBP6.11□□□□□ -1.43
CDH8-213ENST00000584966 CBWD2Q8IUF1 395 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 COLGALT2Q8IYK4 626 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 SYCP3Q8IZU3 236 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 TRIML1Q8N9V2 468 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 RNF169Q8NCN4 708 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 CXorf38Q8TB03 319 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 POMGNT1Q8WZA1 660 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 SAAL1Q96ER3 474 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 BICD1Q96G01 975 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 BORCS6Q96GS4 357 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 CCDC34Q96HJ3 373 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 SNX27Q96L92 541 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 ACAP3Q96P50 834 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 YME1L1Q96TA2 773 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 PAAF1Q9BRP4 392 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 C17orf80Q9BSJ5 609 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 TCHPQ9BT92 498 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 FUCA2Q9BTY2 467 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 MSTO1Q9BUK6 570 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 APOL6Q9BWW8 343 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 TRIM6Q9C030 488 aaPredicted RBP6.11□□□□□ -1.43
CDH8-213ENST00000584966 HSPBP1Q9NZL4 362 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 CGNQ9P2M7 1197 aaKnown RBP6.11□□□□□ -1.43
CDH8-213ENST00000584966 ANKFY1Q9P2R3 1169 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 CACNG4Q9UBN1 327 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 DNAJB4Q9UDY4 337 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 HOOK1Q9UJC3 728 aaKnown RBP6.11□□□□□ -1.43
CDH8-213ENST00000584966 GREB1Q4ZG55 1949 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 DENND4CQ5VZ89 1909 aa6.11□□□□□ -1.43
CDH8-213ENST00000584966 NOTCH4Q99466 2003 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 PTPRJQ12913 1337 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 ZNF638Q14966 1978 aaKnown RBP6.1□□□□□ -1.43
CDH8-213ENST00000584966 C2orf16Q68DN1 1984 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 F8W810 466 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 RFXAPO00287 272 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 LDHAP00338 332 aaKnown RBP6.1□□□□□ -1.43
CDH8-213ENST00000584966 NR3C1P04150 777 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 ITPKAP23677 461 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 CCNE1P24864 410 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 DNAJB1P25685 340 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 BMPR1AP36894 532 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 SLC11A1P49279 550 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 NLRP12P59046 1061 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 SPAG1Q07617 926 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 BTG3Q14201 252 aaPredicted RBP6.1□□□□□ -1.43
CDH8-213ENST00000584966 RAB30Q15771 203 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 CPSF6Q16630 551 aaKnown RBP eCLIP6.1□□□□□ -1.43
CDH8-213ENST00000584966 KYAT1Q16773 422 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 EDRF1Q3B7T1 1238 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 EPC2Q52LR7 807 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 CCDC183Q5T5S1 534 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 TTI2Q6NXR4 508 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 ARMCX5Q6P1M9 558 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 FOXR2Q6PJQ5 311 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 GLB1LQ6UWU2 654 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 IRF2BP1Q8IU81 584 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 RELL1Q8IUW5 271 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 BRSK2Q8IWQ3 736 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 EFCAB13Q8IY85 973 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 RNF168Q8IYW5 571 aaPredicted RBP6.1□□□□□ -1.43
CDH8-213ENST00000584966 SLC39A11Q8N1S5 342 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 GPD1LQ8N335 351 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 FIBCD1Q8N539 461 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 COLGALT1Q8NBJ5 622 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 BCL7CQ8WUZ0 217 aaPredicted RBP6.1□□□□□ -1.43
CDH8-213ENST00000584966 RSPH1Q8WYR4 309 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 P2RX5Q93086 422 aa6.1□□□□□ -1.43
CDH8-213ENST00000584966 CCDC47Q96A33 483 aaKnown RBP6.1□□□□□ -1.43
CDH8-213ENST00000584966 C18orf25Q96B23 403 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms