RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 TMEM174Q8WUU8 243 aa19.24■□□□□ 0.67
SRSF1-208ENST00000584773 MRPS31Q92665 395 aaKnown RBP19.24■□□□□ 0.67
SRSF1-208ENST00000584773 CCDC47Q96A33 483 aaKnown RBP19.24■□□□□ 0.67
SRSF1-208ENST00000584773 SYAP1Q96A49 352 aaPredicted RBP19.24■□□□□ 0.67
SRSF1-208ENST00000584773 CLDN23Q96B33 292 aa19.24■□□□□ 0.67
SRSF1-208ENST00000584773 EEF2KMTQ96G04 330 aa19.24■□□□□ 0.67
SRSF1-208ENST00000584773 SLC22A12Q96S37 553 aa19.24■□□□□ 0.67
SRSF1-208ENST00000584773 OSBPL6Q9BZF3 934 aa19.24■□□□□ 0.67
SRSF1-208ENST00000584773 ZNF518BQ9C0D4 1074 aa19.24■□□□□ 0.67
SRSF1-208ENST00000584773 TRPC7Q9HCX4 862 aa19.24■□□□□ 0.67
SRSF1-208ENST00000584773 PRR23AA6NEV1 266 aa19.23■□□□□ 0.67
SRSF1-208ENST00000584773 A8MXQ7 604 aa19.23■□□□□ 0.67
SRSF1-208ENST00000584773 AKAP3O75969 853 aa19.23■□□□□ 0.67
SRSF1-208ENST00000584773 PTPN1P18031 435 aaKnown RBP19.23■□□□□ 0.67
SRSF1-208ENST00000584773 ATICP31939 592 aa19.23■□□□□ 0.67
SRSF1-208ENST00000584773 GRIK1P39086 918 aa19.23■□□□□ 0.67
SRSF1-208ENST00000584773 KPNA1P52294 538 aaPredicted RBP19.23■□□□□ 0.67
SRSF1-208ENST00000584773 ORC1Q13415 861 aa19.23■□□□□ 0.67
SRSF1-208ENST00000584773 KCNB1Q14721 858 aa19.23■□□□□ 0.67
SRSF1-208ENST00000584773 TRIM68Q6AZZ1 485 aa19.23■□□□□ 0.67
SRSF1-208ENST00000584773 TTC16Q8NEE8 873 aa19.23■□□□□ 0.67
SRSF1-208ENST00000584773 TRMT2BQ96GJ1 504 aaKnown RBP19.23■□□□□ 0.67
SRSF1-208ENST00000584773 MYRFLQ96LU7 910 aa19.23■□□□□ 0.67
SRSF1-208ENST00000584773 CYP2S1Q96SQ9 504 aa19.23■□□□□ 0.67
SRSF1-208ENST00000584773 OBP2AQ9NY56 170 aa19.23■□□□□ 0.67
SRSF1-208ENST00000584773 FANCMQ8IYD8 2048 aa19.22■□□□□ 0.67
SRSF1-208ENST00000584773 C2orf78A6NCI8 922 aa19.22■□□□□ 0.67
SRSF1-208ENST00000584773 F8VP50 259 aa19.22■□□□□ 0.67
SRSF1-208ENST00000584773 MAN2B1O00754 1011 aa19.22■□□□□ 0.67
SRSF1-208ENST00000584773 WEE1P30291 646 aa19.22■□□□□ 0.67
SRSF1-208ENST00000584773 AVPR1AP37288 418 aa19.22■□□□□ 0.67
SRSF1-208ENST00000584773 NUCB2P80303 420 aa19.22■□□□□ 0.67
SRSF1-208ENST00000584773 ZACNQ401N2 412 aa19.22■□□□□ 0.67
SRSF1-208ENST00000584773 ZNF667Q5HYK9 610 aa19.22■□□□□ 0.67
SRSF1-208ENST00000584773 TSSK4Q6SA08 328 aa19.22■□□□□ 0.67
SRSF1-208ENST00000584773 SV2AQ7L0J3 742 aa19.22■□□□□ 0.67
SRSF1-208ENST00000584773 MON1AQ86VX9 555 aa19.22■□□□□ 0.67
SRSF1-208ENST00000584773 GUF1Q8N442 669 aaKnown RBP19.22■□□□□ 0.67
SRSF1-208ENST00000584773 CELF5Q8N6W0 485 aaKnown RBP19.22■□□□□ 0.67
SRSF1-208ENST00000584773 B3GALNT2Q8NCR0 500 aa19.22■□□□□ 0.67
SRSF1-208ENST00000584773 TMC2Q8TDI7 906 aa19.22■□□□□ 0.67
SRSF1-208ENST00000584773 B3GNT5Q9BYG0 378 aa19.22■□□□□ 0.67
SRSF1-208ENST00000584773 MMRN2Q9H8L6 949 aa19.22■□□□□ 0.67
SRSF1-208ENST00000584773 VRTNQ9H8Y1 702 aa19.22■□□□□ 0.67
SRSF1-208ENST00000584773 RBM12Q9NTZ6 932 aaKnown RBP19.22■□□□□ 0.67
SRSF1-208ENST00000584773 HMGXB4Q9UGU5 601 aa19.22■□□□□ 0.67
SRSF1-208ENST00000584773 FRMD4BQ9Y2L6 1034 aa19.22■□□□□ 0.67
SRSF1-208ENST00000584773 MRPS17Q9Y2R5 130 aaKnown RBP19.22■□□□□ 0.67
SRSF1-208ENST00000584773 LAMTOR5O43504 91 aa19.21■□□□□ 0.67
SRSF1-208ENST00000584773 VAMP7P51809 220 aa19.21■□□□□ 0.67
SRSF1-208ENST00000584773 AP3M2P53677 418 aa19.21■□□□□ 0.67
SRSF1-208ENST00000584773 PPP3CAQ08209 521 aa19.21■□□□□ 0.67
SRSF1-208ENST00000584773 MTAPQ13126 283 aa19.21■□□□□ 0.67
SRSF1-208ENST00000584773 MAPRE1Q15691 268 aaKnown RBP19.21■□□□□ 0.67
SRSF1-208ENST00000584773 ZCWPW2Q504Y3 356 aa19.21■□□□□ 0.67
SRSF1-208ENST00000584773 ARHGAP29Q52LW3 1261 aa19.21■□□□□ 0.67
SRSF1-208ENST00000584773 VSTM1Q6UX27 236 aa19.21■□□□□ 0.67
SRSF1-208ENST00000584773 ENGASEQ8NFI3 743 aa19.21■□□□□ 0.67
SRSF1-208ENST00000584773 NKD2Q969F2 451 aaPredicted RBP19.21■□□□□ 0.67
SRSF1-208ENST00000584773 NELL2Q99435 816 aa19.21■□□□□ 0.67
SRSF1-208ENST00000584773 LMAN1LQ9HAT1 526 aa19.21■□□□□ 0.67
SRSF1-208ENST00000584773 GKN1Q9NS71 199 aa19.21■□□□□ 0.67
SRSF1-208ENST00000584773 UXTQ9UBK9 157 aaPredicted RBP19.21■□□□□ 0.67
SRSF1-208ENST00000584773 OTOL1A6NHN0 477 aaPredicted RBP19.2■□□□□ 0.66
SRSF1-208ENST00000584773 SPECC1L-ADORA2AF8WAN1 911 aa19.2■□□□□ 0.66
SRSF1-208ENST00000584773 HLA-DRAP01903 254 aa19.2■□□□□ 0.66
SRSF1-208ENST00000584773 DDX6P26196 483 aaKnown RBP eCLIP19.2■□□□□ 0.66
SRSF1-208ENST00000584773 CTHP32929 405 aa19.2■□□□□ 0.66
SRSF1-208ENST00000584773 PIK3CAP42336 1068 aa19.2■□□□□ 0.66
SRSF1-208ENST00000584773 GCLMP48507 274 aa19.2■□□□□ 0.66
SRSF1-208ENST00000584773 CSTF1Q05048 431 aaKnown RBP19.2■□□□□ 0.66
SRSF1-208ENST00000584773 IFRD2Q12894 506 aaPredicted RBP19.2■□□□□ 0.66
SRSF1-208ENST00000584773 FAM186BQ8IYM0 893 aa19.2■□□□□ 0.66
SRSF1-208ENST00000584773 ARL14EPQ8N8R7 260 aaPredicted RBP19.2■□□□□ 0.66
SRSF1-208ENST00000584773 SPATA17Q96L03 361 aa19.2■□□□□ 0.66
SRSF1-208ENST00000584773 HPS4Q9NQG7 708 aa19.2■□□□□ 0.66
SRSF1-208ENST00000584773 TDP1Q9NUW8 608 aa19.2■□□□□ 0.66
SRSF1-208ENST00000584773 HELZP42694 1942 aaKnown RBP19.2■□□□□ 0.66
SRSF1-208ENST00000584773 RIF1Q5UIP0 2472 aaKnown RBP19.19■□□□□ 0.66
SRSF1-208ENST00000584773 CFAP54Q96N23 3096 aa19.19■□□□□ 0.66
SRSF1-208ENST00000584773 GOLGA6L4A6NEF3 574 aa19.19■□□□□ 0.66
SRSF1-208ENST00000584773 NCAM2O15394 837 aa19.19■□□□□ 0.66
SRSF1-208ENST00000584773 KIF20AO95235 890 aa19.19■□□□□ 0.66
SRSF1-208ENST00000584773 CHRNB1P11230 501 aa19.19■□□□□ 0.66
SRSF1-208ENST00000584773 ARSAP15289 507 aa19.19■□□□□ 0.66
SRSF1-208ENST00000584773 ANXA13P27216 316 aa19.19■□□□□ 0.66
SRSF1-208ENST00000584773 RPS9P46781 194 aaKnown RBP19.19■□□□□ 0.66
SRSF1-208ENST00000584773 ADAM9Q13443 819 aa19.19■□□□□ 0.66
SRSF1-208ENST00000584773 GAS6Q14393 721 aa19.19■□□□□ 0.66
SRSF1-208ENST00000584773 PON2Q15165 354 aa19.19■□□□□ 0.66
SRSF1-208ENST00000584773 NFIL3Q16649 462 aa19.19■□□□□ 0.66
SRSF1-208ENST00000584773 DENND5BQ6ZUT9 1274 aa19.19■□□□□ 0.66
SRSF1-208ENST00000584773 PAQR9Q6ZVX9 377 aa19.19■□□□□ 0.66
SRSF1-208ENST00000584773 EBF3Q9H4W6 596 aa19.19■□□□□ 0.66
SRSF1-208ENST00000584773 APOBEC3GQ9HC16 384 aaKnown RBP19.19■□□□□ 0.66
SRSF1-208ENST00000584773 GCNT4Q9P109 453 aa19.19■□□□□ 0.66
SRSF1-208ENST00000584773 PTPRZ1P23471 2315 aaPredicted RBP19.18■□□□□ 0.66
SRSF1-208ENST00000584773 FAM186AA6NE01 2351 aa19.18■□□□□ 0.66
SRSF1-208ENST00000584773 TRIM66O15016 1216 aa19.18■□□□□ 0.66
SRSF1-208ENST00000584773 CKMP06732 381 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms