RNA–Protein interactions for RNA: ENST00000584716.1

CDK5R1-202, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CDK5R1, Length 962 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-202ENST00000584716 NSUN3Q9H649 340 aaKnown RBP13.12□□□□□ -0.31
CDK5R1-202ENST00000584716 KRT82Q9NSB4 513 aa13.12□□□□□ -0.31
CDK5R1-202ENST00000584716 AFF4Q9UHB7 1163 aaKnown RBP13.12□□□□□ -0.31
CDK5R1-202ENST00000584716 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDK5R1-202ENST00000584716 MYO9BQ13459 2157 aa13.12□□□□□ -0.31
CDK5R1-202ENST00000584716 LAMA3Q16787 3333 aa13.12□□□□□ -0.31
CDK5R1-202ENST00000584716 ATP8B3O60423 1300 aa13.12□□□□□ -0.31
CDK5R1-202ENST00000584716 PTPRDP23468 1912 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 MTCL1Q9Y4B5 1905 aaKnown RBP13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 SPDYE4A6NLX3 237 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 PRRG1O14668 218 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 FAM200BP0CF97 657 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 HAPLN1P10915 354 aaPredicted RBP13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 HNRNPH3P31942 346 aaKnown RBP13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 EIF4A3P38919 411 aaKnown RBP13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 PRKCIP41743 596 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 FMO1Q01740 532 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 SMARCB1Q12824 385 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 STILQ15468 1287 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 DUSP6Q16828 381 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 DDR2Q16832 855 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 LILRA6Q6PI73 481 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 TTC30AQ86WT1 665 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 DEFB123Q8N688 67 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 ANKRD52Q8NB46 1076 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 STKLD1Q8NE28 680 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 GPR152Q8TDT2 470 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 GIPC2Q8TF65 315 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 C2orf15Q8WU43 125 aaKnown RBP13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 MYLIPQ8WY64 445 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 SECISBP2LQ93073 1101 aaKnown RBP13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 PPP2R3CQ969Q6 453 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 SMARCD1Q96GM5 515 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 PCDHB18PQ96TA0 734 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 SMOQ99835 787 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 DUSP16Q9BY84 665 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 ARHGAP20Q9P2F6 1191 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 MTCH2Q9Y6C9 303 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 BZW2Q9Y6E2 419 aaKnown RBP13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 MYO7AQ13402 2215 aa13.11□□□□□ -0.31
CDK5R1-202ENST00000584716 TMCO5BA8MYB1 307 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 F8VP50 259 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 TULP2O00295 520 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 PIK3R2O00459 728 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 ANXA13P27216 316 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 RGS7P49802 495 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 SLC8A3P57103 927 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 GSDMDP57764 484 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 PDE4CQ08493 712 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 HYAL1Q12794 435 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 IFRD2Q12894 506 aaPredicted RBP13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 CFAP221Q4G0U5 840 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 SMYD5Q6GMV2 418 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 EP400NLQ6ZTU2 488 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 CLEC20AQ6ZU45 233 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 ZNF677Q86XU0 584 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 SLC7A14Q8TBB6 771 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 SLC22A17Q8WUG5 538 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 CPA5Q8WXQ8 436 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 FUBP3Q96I24 572 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 PANX2Q96RD6 677 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 CDX2Q99626 313 aaPredicted RBP13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 DEF6Q9H4E7 631 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 NHEJ1Q9H9Q4 299 aaPredicted RBP13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 MAN1C1Q9NR34 630 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 ST7Q9NRC1 585 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 TMEM30AQ9NV96 361 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 LMCD1Q9NZU5 365 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 PCDHGC3Q9UN70 934 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 HCFC2Q9Y5Z7 792 aa13.1□□□□□ -0.31
CDK5R1-202ENST00000584716 TRANK1O15050 2925 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 LINC01565O15544 149 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 C8AP07357 584 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 NPR3P17342 541 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 GPD2P43304 727 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 MAGEA11P43364 429 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 ALDH1A3P47895 512 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 TUFMP49411 452 aaKnown RBP13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 BCAT1P54687 386 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 CCDC173Q0VFZ6 552 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 BST2Q10589 180 aaKnown RBP13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 TWF1Q12792 350 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 CCDC85BQ15834 202 aaPredicted RBP13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 MEA1Q16626 185 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 LIN9Q5TKA1 542 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 NAA35Q5VZE5 725 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 CCDC149Q6ZUS6 474 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 DNAAF5Q86Y56 855 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 TCEAL8Q8IYN2 117 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 WDTC1Q8N5D0 677 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 C1orf131Q8NDD1 294 aaKnown RBP13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 ZMIZ2Q8NF64 920 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 SLC30A5Q8TAD4 765 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 PPM1EQ8WY54 764 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 PDLIM2Q96JY6 352 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 CCDC42Q96M95 316 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 BAG1Q99933 345 aaPredicted RBP13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 ABCB6Q9NP58 842 aa13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 DMAP1Q9NPF5 467 aaPredicted RBP13.09□□□□□ -0.31
CDK5R1-202ENST00000584716 ADAMTS1Q9UHI8 967 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms