RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 AKR1B10O60218 316 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 CLASP2O75122 1294 aaKnown RBP19.38■□□□□ 0.69
RFFL-211ENST00000584541 LSM8O95777 96 aaKnown RBP19.38■□□□□ 0.69
RFFL-211ENST00000584541 PLEKP08567 350 aaPredicted RBP19.38■□□□□ 0.69
RFFL-211ENST00000584541 SETSIPP0DME0 302 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 NPR3P17342 541 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 CHRNB2P17787 502 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 CYP2F1P24903 491 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 EIF4A3P38919 411 aaKnown RBP19.38■□□□□ 0.69
RFFL-211ENST00000584541 GRIK1P39086 918 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 MAGEA11P43364 429 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 TUFMP49411 452 aaKnown RBP19.38■□□□□ 0.69
RFFL-211ENST00000584541 CDR1P51861 262 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 DUSP4Q13115 394 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 MGAT5BQ3V5L5 792 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 ELMSAN1Q6PJG2 1045 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 PAQR9Q6ZVX9 377 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 PASD1Q8IV76 773 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 LRRC8AQ8IWT6 810 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 TMEM35BQ8NCS4 154 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 UBA3Q8TBC4 463 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 NOX5Q96PH1 765 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 CDCA3Q99618 268 aaPredicted RBP19.38■□□□□ 0.69
RFFL-211ENST00000584541 CHP1Q99653 195 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 NSUN3Q9H649 340 aaKnown RBP19.38■□□□□ 0.69
RFFL-211ENST00000584541 NHEJ1Q9H9Q4 299 aaPredicted RBP19.38■□□□□ 0.69
RFFL-211ENST00000584541 CYP4F11Q9HBI6 524 aa19.38■□□□□ 0.69
RFFL-211ENST00000584541 DMAP1Q9NPF5 467 aaPredicted RBP19.38■□□□□ 0.69
RFFL-211ENST00000584541 RANBP2P49792 3224 aaKnown RBP19.38■□□□□ 0.69
RFFL-211ENST00000584541 PATJQ8NI35 1801 aa19.37■□□□□ 0.69
RFFL-211ENST00000584541 HAPLN1P10915 354 aaPredicted RBP19.37■□□□□ 0.69
RFFL-211ENST00000584541 FECHP22830 423 aa19.37■□□□□ 0.69
RFFL-211ENST00000584541 CYLC1P35663 651 aaPredicted RBP19.37■□□□□ 0.69
RFFL-211ENST00000584541 CLCN4P51793 760 aa19.37■□□□□ 0.69
RFFL-211ENST00000584541 RPL10AP62906 217 aaKnown RBP19.37■□□□□ 0.69
RFFL-211ENST00000584541 GRIN2CQ14957 1233 aa19.37■□□□□ 0.69
RFFL-211ENST00000584541 LIN9Q5TKA1 542 aa19.37■□□□□ 0.69
RFFL-211ENST00000584541 GPR153Q6NV75 609 aa19.37■□□□□ 0.69
RFFL-211ENST00000584541 PPP1R2P3Q6NXS1 205 aa19.37■□□□□ 0.69
RFFL-211ENST00000584541 DENND1BQ6P3S1 775 aa19.37■□□□□ 0.69
RFFL-211ENST00000584541 CCDC149Q6ZUS6 474 aa19.37■□□□□ 0.69
RFFL-211ENST00000584541 RBM23Q86U06 439 aaKnown RBP19.37■□□□□ 0.69
RFFL-211ENST00000584541 TTC30AQ86WT1 665 aa19.37■□□□□ 0.69
RFFL-211ENST00000584541 SCN4BQ8IWT1 228 aa19.37■□□□□ 0.69
RFFL-211ENST00000584541 CCDC170Q8IYT3 715 aa19.37■□□□□ 0.69
RFFL-211ENST00000584541 SECISBP2LQ93073 1101 aaKnown RBP19.37■□□□□ 0.69
RFFL-211ENST00000584541 GAS2L1Q99501 681 aaPredicted RBP19.37■□□□□ 0.69
RFFL-211ENST00000584541 SEPT5Q99719 369 aaPredicted RBP19.37■□□□□ 0.69
RFFL-211ENST00000584541 SYT11Q9BT88 431 aa19.37■□□□□ 0.69
RFFL-211ENST00000584541 SLC27A5Q9Y2P5 690 aa19.37■□□□□ 0.69
RFFL-211ENST00000584541 LAMA2P24043 3122 aaKnown RBP19.36■□□□□ 0.69
RFFL-211ENST00000584541 CFHP08603 1231 aa19.36■□□□□ 0.69
RFFL-211ENST00000584541 NRIP1P48552 1158 aa19.36■□□□□ 0.69
RFFL-211ENST00000584541 MAP3K7CLP57077 242 aa19.36■□□□□ 0.69
RFFL-211ENST00000584541 PDE4CQ08493 712 aa19.36■□□□□ 0.69
RFFL-211ENST00000584541 DUSP6Q16828 381 aa19.36■□□□□ 0.69
RFFL-211ENST00000584541 HABP4Q5JVS0 413 aaKnown RBP19.36■□□□□ 0.69
RFFL-211ENST00000584541 LILRA6Q6PI73 481 aa19.36■□□□□ 0.69
RFFL-211ENST00000584541 CLEC20AQ6ZU45 233 aa19.36■□□□□ 0.69
RFFL-211ENST00000584541 ADGRD2Q7Z7M1 963 aa19.36■□□□□ 0.69
RFFL-211ENST00000584541 TCEAL8Q8IYN2 117 aa19.36■□□□□ 0.69
RFFL-211ENST00000584541 KREMEN2Q8NCW0 462 aa19.36■□□□□ 0.69
RFFL-211ENST00000584541 MSANTD4Q8NCY6 345 aa19.36■□□□□ 0.69
RFFL-211ENST00000584541 RHOBTB2Q9BYZ6 727 aa19.36■□□□□ 0.69
RFFL-211ENST00000584541 CSNK1G1Q9HCP0 422 aa19.36■□□□□ 0.69
RFFL-211ENST00000584541 ADAMTS1Q9UHI8 967 aa19.36■□□□□ 0.69
RFFL-211ENST00000584541 FBXW11Q9UKB1 542 aa19.36■□□□□ 0.69
RFFL-211ENST00000584541 XPO1O14980 1071 aaKnown RBP19.35■□□□□ 0.69
RFFL-211ENST00000584541 PER2O15055 1255 aa19.35■□□□□ 0.69
RFFL-211ENST00000584541 SEC24AO95486 1093 aa19.35■□□□□ 0.69
RFFL-211ENST00000584541 VNN2O95498 520 aa19.35■□□□□ 0.69
RFFL-211ENST00000584541 CDH5P33151 784 aaPredicted RBP19.35■□□□□ 0.69
RFFL-211ENST00000584541 GPD2P43304 727 aa19.35■□□□□ 0.69
RFFL-211ENST00000584541 ALDH1A3P47895 512 aa19.35■□□□□ 0.69
RFFL-211ENST00000584541 KIF11P52732 1056 aa19.35■□□□□ 0.69
RFFL-211ENST00000584541 SNX16P57768 344 aa19.35■□□□□ 0.69
RFFL-211ENST00000584541 PLD1Q13393 1074 aa19.35■□□□□ 0.69
RFFL-211ENST00000584541 CLEC16AQ2KHT3 1053 aa19.35■□□□□ 0.69
RFFL-211ENST00000584541 PKDCCQ504Y2 493 aa19.35■□□□□ 0.69
RFFL-211ENST00000584541 C1orf131Q8NDD1 294 aaKnown RBP19.35■□□□□ 0.69
RFFL-211ENST00000584541 HDAC7Q8WUI4 952 aa19.35■□□□□ 0.69
RFFL-211ENST00000584541 C8orf48Q96LL4 319 aa19.35■□□□□ 0.69
RFFL-211ENST00000584541 SMOQ99835 787 aa19.35■□□□□ 0.69
RFFL-211ENST00000584541 UBXN6Q9BZV1 441 aa19.35■□□□□ 0.69
RFFL-211ENST00000584541 PLEKHA4Q9H4M7 779 aa19.35■□□□□ 0.69
RFFL-211ENST00000584541 SPDYE4A6NLX3 237 aa19.34■□□□□ 0.69
RFFL-211ENST00000584541 F8VP50 259 aa19.34■□□□□ 0.69
RFFL-211ENST00000584541 DDX3XO00571 662 aaKnown RBP eCLIP19.34■□□□□ 0.693e-14■■■□□ 16.2
RFFL-211ENST00000584541 IPO7O95373 1038 aaKnown RBP19.34■□□□□ 0.69
RFFL-211ENST00000584541 CYP1A1P04798 512 aaPredicted RBP19.34■□□□□ 0.69
RFFL-211ENST00000584541 SPATA31D3P0C874 917 aa19.34■□□□□ 0.69
RFFL-211ENST00000584541 SRGAP2BP0DMP2 458 aa19.34■□□□□ 0.69
RFFL-211ENST00000584541 NSFP46459 744 aaKnown RBP19.34■□□□□ 0.69
RFFL-211ENST00000584541 PLA2G4AP47712 749 aa19.34■□□□□ 0.69
RFFL-211ENST00000584541 NOMO3P69849 1222 aa19.34■□□□□ 0.69
RFFL-211ENST00000584541 SLC18A3Q16572 532 aa19.34■□□□□ 0.69
RFFL-211ENST00000584541 NAA35Q5VZE5 725 aa19.34■□□□□ 0.69
RFFL-211ENST00000584541 SPATA31D4Q6ZUB0 917 aa19.34■□□□□ 0.69
RFFL-211ENST00000584541 RTL10Q7L3V2 364 aa19.34■□□□□ 0.69
RFFL-211ENST00000584541 TTC9BQ8N6N2 239 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms