RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 LRRC15Q8TF66 581 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 NFKBIZQ9BYH8 718 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 C2orf40Q9H1Z8 148 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 C17orf75Q9HAS0 396 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 PIDD1Q9HB75 910 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 POLD4Q9HCU8 107 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 SLC39A2Q9NP94 309 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 GDF3Q9NR23 364 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 TRIM10Q9UDY6 481 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 ODF2LQ9ULJ1 636 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 TRAF3IP3Q9Y228 551 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.54□□□□□ -0.72
MKS1-212ENST00000583577 SHROOM3Q8TF72 1996 aa10.54□□□□□ -0.72
MKS1-212ENST00000583577 ASCC3Q8N3C0 2202 aaKnown RBP10.53□□□□□ -0.72
MKS1-212ENST00000583577 RCCD1A6NED2 376 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 CCDC169A6NNP5 214 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 CYSRT1A8MQ03 144 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 ZNF263O14978 683 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 NCAM2O15394 837 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 CALUO43852 315 aaPredicted RBP10.53□□□□□ -0.72
MKS1-212ENST00000583577 TBCAO75347 108 aaKnown RBP10.53□□□□□ -0.72
MKS1-212ENST00000583577 RFPL2O75678 378 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 FAM13AO94988 1023 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 TOP3BO95985 862 aaKnown RBP10.53□□□□□ -0.72
MKS1-212ENST00000583577 CCDC172P0C7W6 258 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 GGCXP38435 758 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 PRKCIP41743 596 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 SMTNP53814 917 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 PEX3P56589 373 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 SRSF5Q13243 272 aaKnown RBP10.53□□□□□ -0.72
MKS1-212ENST00000583577 DMP1Q13316 513 aaPredicted RBP10.53□□□□□ -0.72
MKS1-212ENST00000583577 DSC3Q14574 896 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 CCDC6Q16204 474 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 ARSHQ5FYA8 562 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 STPG1Q5TH74 334 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 MEI1Q5TIA1 1274 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 HGSNATQ68CP4 663 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 YTHDF3Q7Z739 585 aaKnown RBP10.53□□□□□ -0.72
MKS1-212ENST00000583577 CROCCP2Q86T23 111 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 IFNLR1Q8IU57 520 aaPredicted RBP10.53□□□□□ -0.72
MKS1-212ENST00000583577 C12orf50Q8NA57 414 aaPredicted RBP10.53□□□□□ -0.72
MKS1-212ENST00000583577 CMASQ8NFW8 434 aaPredicted RBP10.53□□□□□ -0.72
MKS1-212ENST00000583577 BCL7CQ8WUZ0 217 aaPredicted RBP10.53□□□□□ -0.72
MKS1-212ENST00000583577 BSNDQ8WZ55 320 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 TAF4BQ92750 862 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 FGF14Q92915 247 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 CLDN23Q96B33 292 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 LRRC45Q96CN5 670 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 DNAJC19Q96DA6 116 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 IGSF21Q96ID5 467 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 CAPZA3Q96KX2 299 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 TMEM121BQ9BXQ6 578 aaPredicted RBP10.53□□□□□ -0.72
MKS1-212ENST00000583577 CAPS2Q9BXY5 557 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 CHST12Q9NRB3 414 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 RXFP3Q9NSD7 469 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 PANK4Q9NVE7 773 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.53□□□□□ -0.72
MKS1-212ENST00000583577 LARSQ9P2J5 1176 aaKnown RBP10.53□□□□□ -0.72
MKS1-212ENST00000583577 PIN4Q9Y237 131 aaKnown RBP10.53□□□□□ -0.72
MKS1-212ENST00000583577 APC2O95996 2303 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 UBE4BO95155 1302 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 PIEZO2Q9H5I5 2752 aa10.53□□□□□ -0.72
MKS1-212ENST00000583577 NPHP3-ACAD11A0A0J9YXS1 232 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 HMGB1P1B2RPK0 211 aaPredicted RBP10.52□□□□□ -0.73
MKS1-212ENST00000583577 AGPSO00116 658 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 PDXKO00764 312 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 AXLP30530 894 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 CDR1P51861 262 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 EFNA5P52803 228 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 CYP27A1Q02318 531 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 CACNB1Q02641 598 aaPredicted RBP10.52□□□□□ -0.73
MKS1-212ENST00000583577 MAPK7Q13164 816 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 BMT2Q1RMZ1 405 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 CFAP58Q5T655 872 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 KLHDC7AQ5VTJ3 777 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 CDCA2Q69YH5 1023 aaPredicted RBP10.52□□□□□ -0.73
MKS1-212ENST00000583577 PARM1Q6UWI2 310 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 TPRG1Q6ZUI0 275 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 DYMQ7RTS9 669 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 ECHDC2Q86YB7 292 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 DAW1Q8N136 415 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 ACTRT1Q8TDG2 376 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 REEP2Q9BRK0 252 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 LSM14BQ9BX40 385 aaKnown RBP10.52□□□□□ -0.73
MKS1-212ENST00000583577 TLR10Q9BXR5 811 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 MRPL9Q9BYD2 267 aaKnown RBP10.52□□□□□ -0.73
MKS1-212ENST00000583577 ZHX3Q9H4I2 956 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 MINDY3Q9H8M7 445 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 KMT5AQ9NQR1 393 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 FAM207AQ9NSI2 230 aaPredicted RBP10.52□□□□□ -0.73
MKS1-212ENST00000583577 PRMT7Q9NVM4 692 aaPredicted RBP10.52□□□□□ -0.73
MKS1-212ENST00000583577 CAPN6Q9Y6Q1 641 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 ATG2BQ96BY7 2078 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 ZNF462Q96JM2 2506 aa10.52□□□□□ -0.73
MKS1-212ENST00000583577 CFAP46Q8IYW2 2715 aa10.51□□□□□ -0.73
MKS1-212ENST00000583577 SFI1A8K8P3 1242 aa10.51□□□□□ -0.73
MKS1-212ENST00000583577 H0YCG3 227 aa10.51□□□□□ -0.73
MKS1-212ENST00000583577 K7ERI5 159 aa10.51□□□□□ -0.73
MKS1-212ENST00000583577 PDE2AO00408 941 aaPredicted RBP10.51□□□□□ -0.73
MKS1-212ENST00000583577 C2CD2LO14523 706 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms