RNA–Protein interactions for RNA: ENST00000583569.5

NUP85-222, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-222	ENST00000583569	PUM1	Q14671	1186 aa	Known RBP eCLIP	5.28	□□□□□ -1.56
NUP85-222	ENST00000583569	KCTD20	Q7Z5Y7	419 aa		5.28	□□□□□ -1.56
NUP85-222	ENST00000583569	SLC15A3	Q8IY34	581 aa		5.28	□□□□□ -1.56
NUP85-222	ENST00000583569	SPART	Q8N0X7	666 aa		5.28	□□□□□ -1.56
NUP85-222	ENST00000583569	CCDC150	Q8NCX0	1101 aa		5.28	□□□□□ -1.56
NUP85-222	ENST00000583569	TOR1AIP2	Q8NFQ8	470 aa		5.28	□□□□□ -1.56
NUP85-222	ENST00000583569	LPIN2	Q92539	896 aa		5.28	□□□□□ -1.56
NUP85-222	ENST00000583569		Q96MF0	132 aa		5.28	□□□□□ -1.56
NUP85-222	ENST00000583569	AMBRA1	Q9C0C7	1298 aa		5.28	□□□□□ -1.56
NUP85-222	ENST00000583569	DHX36	Q9H2U1	1008 aa	Known RBP	5.28	□□□□□ -1.56
NUP85-222	ENST00000583569	CXorf36	Q9H7Y0	433 aa		5.28	□□□□□ -1.56
NUP85-222	ENST00000583569	PLCB1	Q9NQ66	1216 aa		5.28	□□□□□ -1.56
NUP85-222	ENST00000583569	RGS17	Q9UGC6	210 aa	Predicted RBP	5.28	□□□□□ -1.56
NUP85-222	ENST00000583569	PCDHGB2	Q9Y5G2	931 aa		5.28	□□□□□ -1.56
NUP85-222	ENST00000583569	CDY1	Q9Y6F8	540 aa		5.28	□□□□□ -1.56
NUP85-222	ENST00000583569	CLCA1	A8K7I4	914 aa		5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	AREL1	O15033	823 aa		5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	RRP9	O43818	475 aa	Known RBP	5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	PIAS2	O75928	621 aa		5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	A1BG	P04217	495 aa		5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	ADH4	P08319	380 aa		5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	ZEB1	P37275	1124 aa	Predicted RBP	5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	NPY5R	Q15761	445 aa		5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	ZXDC	Q2QGD7	858 aa	Predicted RBP	5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	DGKK	Q5KSL6	1271 aa		5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	PLAG1	Q6DJT9	500 aa		5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	CATSPERG	Q6ZRH7	1159 aa		5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	TSHZ1	Q6ZSZ6	1077 aa		5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	LNX2	Q8N448	690 aa		5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	FAM109A	Q8N4B1	249 aa		5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	FANCB	Q8NB91	859 aa		5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	VPS37A	Q8NEZ2	397 aa		5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	MYCBPAP	Q8TBZ2	947 aa		5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	ZNF566	Q969W8	418 aa		5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	AIFM2	Q9BRQ8	373 aa		5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	MAGEB5	Q9BZ81	275 aa		5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	CYP4F11	Q9HBI6	524 aa		5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	HEYL	Q9NQ87	328 aa	Predicted RBP	5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	DNMT3B	Q9UBC3	853 aa	Known RBP	5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	SSX2IP	Q9Y2D8	614 aa		5.27	□□□□□ -1.57
NUP85-222	ENST00000583569	ABHD14A-ACY1	A0A1B0GW23	586 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	AQP7P3	A6NL99	342 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	MATN3	O15232	486 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	PPM1D	O15297	605 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	YY2	O15391	372 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	NARS	O43776	548 aa	Known RBP	5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	PEX1	O43933	1283 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	SRGAP2	O75044	1071 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	MYL4	P12829	197 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	EEF1G	P26641	437 aa	Known RBP	5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	MCM7	P33993	719 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	PPM1A	P35813	382 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	HNRNPM	P52272	730 aa	Known RBP eCLIP	5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	NXPH1	P58417	271 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	KRTAP10-2	P60368	255 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	BLOC1S1	P78537	153 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	STK3	Q13188	491 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	GRM1	Q13255	1194 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	SLC35G1	Q2M3R5	365 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	PTCHD3	Q3KNS1	767 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	C10orf62	Q5T681	223 aa	Predicted RBP	5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	IGFL4	Q6B9Z1	124 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	FCRL6	Q6DN72	434 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	VWA1	Q6PCB0	445 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	VGLL2	Q8N8G2	317 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	DNAJB14	Q8TBM8	379 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	TMEM171	Q8WVE6	324 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	FBXL20	Q96IG2	436 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	PSMD1	Q99460	953 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	SELENOO	Q9BVL4	669 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	EIF2A	Q9BY44	585 aa	Known RBP	5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	KRTAP9-9	Q9BYP9	154 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	KRTAP9-4	Q9BYQ2	154 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	FAM83D	Q9H4H8	585 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	GBA2	Q9HCG7	927 aa	Predicted RBP	5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	KCTD5	Q9NXV2	234 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	CDC23	Q9UJX2	597 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	MAN2B2	Q9Y2E5	1009 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	LRCH1	Q9Y2L9	728 aa		5.26	□□□□□ -1.57
NUP85-222	ENST00000583569	CSF1R	P07333	972 aa		5.25	□□□□□ -1.57
NUP85-222	ENST00000583569	PDHA1	P08559	390 aa		5.25	□□□□□ -1.57
NUP85-222	ENST00000583569	ADORA2A	P29274	412 aa		5.25	□□□□□ -1.57
NUP85-222	ENST00000583569	PRKAR1B	P31321	381 aa		5.25	□□□□□ -1.57
NUP85-222	ENST00000583569	TEC	P42680	631 aa		5.25	□□□□□ -1.57
NUP85-222	ENST00000583569	HSPA7	P48741	367 aa		5.25	□□□□□ -1.57
NUP85-222	ENST00000583569	PDE6C	P51160	858 aa		5.25	□□□□□ -1.57
NUP85-222	ENST00000583569	CHAF1A	Q13111	956 aa	Predicted RBP	5.25	□□□□□ -1.57
NUP85-222	ENST00000583569	EIF2B5	Q13144	721 aa	Known RBP	5.25	□□□□□ -1.57
NUP85-222	ENST00000583569	MPEG1	Q2M385	716 aa		5.25	□□□□□ -1.57
NUP85-222	ENST00000583569	ZNF750	Q32MQ0	723 aa		5.25	□□□□□ -1.57
NUP85-222	ENST00000583569	DEPDC1	Q5TB30	811 aa		5.25	□□□□□ -1.57
NUP85-222	ENST00000583569	KRT28	Q7Z3Y7	464 aa		5.25	□□□□□ -1.57
NUP85-222	ENST00000583569	MYLK4	Q86YV6	388 aa	Predicted RBP	5.25	□□□□□ -1.57
NUP85-222	ENST00000583569	VRK3	Q8IV63	474 aa		5.25	□□□□□ -1.57
NUP85-222	ENST00000583569	SYTL1	Q8IYJ3	562 aa		5.25	□□□□□ -1.57
NUP85-222	ENST00000583569	SLC44A3	Q8N4M1	653 aa		5.25	□□□□□ -1.57
NUP85-222	ENST00000583569	ENAH	Q8N8S7	591 aa	Predicted RBP	5.25	□□□□□ -1.57
NUP85-222	ENST00000583569	ATG4A	Q8WYN0	398 aa		5.25	□□□□□ -1.57
NUP85-222	ENST00000583569	CAVIN3	Q969G5	261 aa		5.25	□□□□□ -1.57
NUP85-222	ENST00000583569	FKBP10	Q96AY3	582 aa		5.25	□□□□□ -1.57

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