RNA–Protein interactions for RNA: ENST00000583514.5

LLGL2-221, Transcript of LLGL2, scribble cell polarity complex component, human

TSL 3

Gene LLGL2, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LLGL2-221	ENST00000583514	TDP1	Q9NUW8	608 aa		16.65	■□□□□ 0.26
LLGL2-221	ENST00000583514	CHURC1-FNTB	B4DL54	471 aa		16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	GABRD	O14764	452 aa		16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	ATP2C2	O75185	946 aa		16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	SLFN14	P0C7P3	912 aa		16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	PCSK1	P29120	753 aa		16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	FNTB	P49356	437 aa		16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	DMWD	Q09019	674 aa		16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	CCIN	Q13939	588 aa		16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	SURF1	Q15526	300 aa		16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	TRIM68	Q6AZZ1	485 aa		16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	DGLUCY	Q7Z3D6	616 aa		16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	SCN4B	Q8IWT1	228 aa		16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	TRIML1	Q8N9V2	468 aa		16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	RDH13	Q8NBN7	331 aa		16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	SPATA18	Q8TC71	538 aa		16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	FAM83C	Q9BQN1	747 aa		16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	EBF3	Q9H4W6	596 aa		16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	MAGEF1	Q9HAY2	307 aa		16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	C2orf42	Q9NWW7	574 aa		16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	UXT	Q9UBK9	157 aa	Predicted RBP	16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	RAB23	Q9ULC3	237 aa		16.64	■□□□□ 0.25
LLGL2-221	ENST00000583514	OTOL1	A6NHN0	477 aa	Predicted RBP	16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	EIF3D	O15371	548 aa	Known RBP eCLIP	16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	POLR2D	O15514	142 aa	Known RBP	16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	TADA3	O75528	432 aa		16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	NOL4	O94818	638 aa		16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	MYL1	P05976	194 aa		16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	LMO2	P25791	158 aa		16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	RUNX3	Q13761	415 aa		16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	PUM1	Q14671	1186 aa	Known RBP eCLIP	16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	RSPO4	Q2I0M5	234 aa	Predicted RBP	16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	CFAP221	Q4G0U5	840 aa		16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	FAM26F	Q5R3K3	315 aa		16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	HEATR6	Q6AI08	1181 aa	Known RBP	16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	PRR23B	Q6ZRT6	265 aa		16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	EPM2AIP1	Q7L775	607 aa	Predicted RBP	16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	DPH6	Q7L8W6	267 aa		16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	LIMS2	Q7Z4I7	341 aa		16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	CEP57L1	Q8IYX8	460 aa		16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	GPR161	Q8N6U8	529 aa	Known RBP	16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	RIN3	Q8TB24	985 aa		16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	ZNF507	Q8TCN5	953 aa		16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	KBTBD7	Q8WVZ9	684 aa		16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	TRMT2B	Q96GJ1	504 aa	Known RBP	16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	MYRFL	Q96LU7	910 aa		16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	C7orf25	Q9BPX7	421 aa		16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	KIAA1586	Q9HCI6	787 aa		16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	TRPC7	Q9HCX4	862 aa		16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	HPS4	Q9NQG7	708 aa		16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	GMEB2	Q9UKD1	530 aa		16.63	■□□□□ 0.25
LLGL2-221	ENST00000583514	SOBP	A7XYQ1	873 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514		K7ESF4	209 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	CLIC2	O15247	247 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	TGFB1I1	O43294	461 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	HR	O43593	1189 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	PAPSS2	O95340	614 aa	Predicted RBP	16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	SMC2	O95347	1197 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	PDGFRB	P09619	1106 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	DLAT	P10515	647 aa	Known RBP	16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	CASP1	P29466	404 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	HOXC13	P31276	330 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	PSMC1	P62191	440 aa	Known RBP	16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	SNRNP35	Q16560	246 aa	Known RBP	16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	ANO6	Q4KMQ2	910 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	CC2D1A	Q6P1N0	951 aa	Predicted RBP	16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	CNNM4	Q6P4Q7	775 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	FAM171B	Q6P995	826 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	TRAPPC11	Q7Z392	1133 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	WDR49	Q8IV35	697 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	NELFCD	Q8IXH7	590 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	SYNPO	Q8N3V7	929 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	TTC16	Q8NEE8	873 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	FUBP3	Q96I24	572 aa	Known RBP eCLIP	16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	CYP2S1	Q96SQ9	504 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	MMS19	Q96T76	1030 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	SYT15	Q9BQS2	421 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	GTPBP4	Q9BZE4	634 aa	Known RBP	16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	BLZF1	Q9H2G9	400 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	KIF9	Q9HAQ2	790 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	AGPAT3	Q9NRZ7	376 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	DLL3	Q9NYJ7	618 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	USP18	Q9UMW8	372 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	SPTBN2	O15020	2390 aa		16.62	■□□□□ 0.25
LLGL2-221	ENST00000583514	NUP210	Q8TEM1	1887 aa	Predicted RBP	16.61	■□□□□ 0.25
LLGL2-221	ENST00000583514	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	16.61	■□□□□ 0.25
LLGL2-221	ENST00000583514	ACTN4	O43707	911 aa	Known RBP	16.61	■□□□□ 0.25
LLGL2-221	ENST00000583514	ARSA	P15289	507 aa		16.61	■□□□□ 0.25
LLGL2-221	ENST00000583514	TNNI1	P19237	187 aa		16.61	■□□□□ 0.25
LLGL2-221	ENST00000583514	TGM1	P22735	817 aa		16.61	■□□□□ 0.25
LLGL2-221	ENST00000583514	ZNF165	P49910	485 aa		16.61	■□□□□ 0.25
LLGL2-221	ENST00000583514	CYP2J2	P51589	502 aa		16.61	■□□□□ 0.25
LLGL2-221	ENST00000583514	SRSF5	Q13243	272 aa	Known RBP	16.61	■□□□□ 0.25
LLGL2-221	ENST00000583514	SIM2	Q14190	667 aa	Predicted RBP	16.61	■□□□□ 0.25
LLGL2-221	ENST00000583514	ZNF268	Q14587	947 aa	Predicted RBP	16.61	■□□□□ 0.25
LLGL2-221	ENST00000583514	C4orf50	Q6ZRC1	276 aa		16.61	■□□□□ 0.25
LLGL2-221	ENST00000583514	UNC13D	Q70J99	1090 aa		16.61	■□□□□ 0.25
LLGL2-221	ENST00000583514	LONP2	Q86WA8	852 aa		16.61	■□□□□ 0.25
LLGL2-221	ENST00000583514	SPATA20	Q8TB22	786 aa		16.61	■□□□□ 0.25
LLGL2-221	ENST00000583514	SCFD1	Q8WVM8	642 aa		16.61	■□□□□ 0.25

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms