RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	USP13	Q92995	863 aa	Predicted RBP	5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	ATXN7L3B	Q96GX2	97 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	MRGPRX1	Q96LB2	322 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	ZFP42	Q96MM3	310 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	STRBP	Q96SI9	672 aa	Known RBP	5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	EPAS1	Q99814	870 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	DNAJC25	Q9H1X3	360 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	ECHDC1	Q9NTX5	307 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	CCL26	Q9Y258	94 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	GIT1	Q9Y2X7	761 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	SON	P18583	2426 aa	Known RBP	5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	HIVEP2	P31629	2446 aa		5.52	□□□□□ -1.53
MSI2-216	ENST00000582772	TSPY2	A6NKD2	308 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	DDX11L8	A8MPP1	907 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	VILL	O15195	856 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	CSDE1	O75534	798 aa	Known RBP	5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	ITGA4	P13612	1032 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	HOXB2	P14652	356 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	NR1D1	P20393	614 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	ATP4A	P20648	1035 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	VARS	P26640	1264 aa	Known RBP	5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	HOXA11	P31270	313 aa	Predicted RBP	5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	KRT83	P78385	493 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	NR1H3	Q13133	447 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	TUSC3	Q13454	348 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	EFCAB12	Q6NXP0	572 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	CC2D1A	Q6P1N0	951 aa	Predicted RBP	5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	VASH2	Q86V25	355 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	ZNF410	Q86VK4	478 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	KCTD17	Q8N5Z5	321 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	TMEM158	Q8WZ71	300 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	ACAP3	Q96P50	834 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	GPR174	Q9BXC1	333 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	LY9	Q9HBG7	655 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	CHST11	Q9NPF2	352 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	BMP2K	Q9NSY1	1161 aa	Predicted RBP	5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	AFF4	Q9UHB7	1163 aa	Known RBP	5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	STARD13	Q9Y3M8	1113 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	IPP	Q9Y573	584 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	ASB3	Q9Y575	518 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	PCDHA5	Q9Y5H7	936 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	NUMA1	Q14980	2115 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	MYH10	P35580	1976 aa		5.51	□□□□□ -1.53
MSI2-216	ENST00000582772	CKAP5	Q14008	2032 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	CCDC187	A0A096LP49	1063 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	NVL	O15381	856 aa	Known RBP	5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	ZBTB24	O43167	697 aa	Predicted RBP	5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	KAT7	O95251	611 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	CBX6	O95503	412 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	ITGB3	P05106	788 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	COX6B1	P14854	86 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	OXTR	P30559	389 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	QARS	P47897	775 aa	Known RBP	5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	RXRG	P48443	463 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	PER3	P56645	1201 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	ZNF211	Q13398	564 aa	Predicted RBP	5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	LBR	Q14739	615 aa	Known RBP	5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	MTF1	Q14872	753 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	SLFNL1	Q499Z3	407 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	FAM160B1	Q5W0V3	765 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772		Q71RC1	249 aa	Predicted RBP	5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	SFTPA1	Q8IWL2	248 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	SIRT2	Q8IXJ6	389 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	BEST2	Q8NFU1	509 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	IPO4	Q8TEX9	1081 aa	Known RBP	5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	HASPIN	Q8TF76	798 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	PSMG2	Q969U7	264 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	EAF2	Q96CJ1	260 aa	Predicted RBP	5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	SCLT1	Q96NL6	688 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	GABRG3	Q99928	467 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	SLC46A2	Q9BY10	475 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	SPRTN	Q9H040	489 aa	Predicted RBP	5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	PUS7L	Q9H0K6	701 aa	Known RBP	5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	SMG9	Q9H0W8	520 aa	Known RBP	5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	CPVL	Q9H3G5	476 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	ATXN3L	Q9H3M9	355 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	MCCC2	Q9HCC0	563 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	TDP1	Q9NUW8	608 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	YIPF1	Q9Y548	306 aa		5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	CHD3	Q12873	2000 aa	Known RBP	5.5	□□□□□ -1.53
MSI2-216	ENST00000582772	ZAN	Q9Y493	2812 aa		5.49	□□□□□ -1.53
MSI2-216	ENST00000582772		A0A1B0GVM2	712 aa		5.49	□□□□□ -1.53
MSI2-216	ENST00000582772	FAM171A2	A8MVW0	826 aa		5.49	□□□□□ -1.53
MSI2-216	ENST00000582772	TCEA3	O75764	348 aa		5.49	□□□□□ -1.53
MSI2-216	ENST00000582772	REC8	O95072	547 aa		5.49	□□□□□ -1.53
MSI2-216	ENST00000582772	SLC3A2	P08195	630 aa	Known RBP	5.49	□□□□□ -1.53
MSI2-216	ENST00000582772	RARA	P10276	462 aa		5.49	□□□□□ -1.53
MSI2-216	ENST00000582772	CKMT1A	P12532	417 aa		5.49	□□□□□ -1.53
MSI2-216	ENST00000582772	ITGB7	P26010	798 aa		5.49	□□□□□ -1.53
MSI2-216	ENST00000582772	GABRR2	P28476	465 aa		5.49	□□□□□ -1.53
MSI2-216	ENST00000582772	GRIA2	P42262	883 aa		5.49	□□□□□ -1.53
MSI2-216	ENST00000582772	ARRB1	P49407	418 aa	Predicted RBP	5.49	□□□□□ -1.53
MSI2-216	ENST00000582772	MESP2	Q0VG99	397 aa		5.49	□□□□□ -1.53
MSI2-216	ENST00000582772	EIF3I	Q13347	325 aa	Known RBP	5.49	□□□□□ -1.53
MSI2-216	ENST00000582772	MTMR1	Q13613	665 aa		5.49	□□□□□ -1.53
MSI2-216	ENST00000582772	NAB2	Q15742	525 aa		5.49	□□□□□ -1.53
MSI2-216	ENST00000582772	ZNF77	Q15935	545 aa		5.49	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms