RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 SPDYE4A6NLX3 237 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 F8W8V4 182 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 XPO1O14980 1071 aaKnown RBP10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 NUDT17P0C025 328 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 TERF2Q15554 542 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 C17orf99Q6UX52 265 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 KDM7AQ6ZMT4 941 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 BBS12Q6ZW61 710 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 CPLX4Q7Z7G2 160 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 CCDC25Q86WR0 208 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 VPS52Q8N1B4 723 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 CXorf38Q8TB03 319 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 SEMA4DQ92854 862 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 SMARCD1Q96GM5 515 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 H0YHG0 523 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 ADCY6O43306 1168 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 DAB1O75553 588 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 BRD2P25440 801 aaKnown RBP10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 NFKBIAP25963 317 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 LRPAP1P30533 357 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 RPL10AP62906 217 aaKnown RBP10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 TAF12Q16514 161 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 CRYBG2Q8N1P7 616 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 PGM2Q96G03 612 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 SGSM3Q96HU1 749 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 TRIM7Q9C029 511 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 FBXO44Q9H4M3 255 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 CATSPERBQ9H7T0 1116 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 HMX1Q9NP08 348 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 PNPLA8Q9NP80 782 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 GGA2Q9UJY4 613 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 APOC4-APOC2K7ER74 178 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 PPFIA2O75334 1257 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 MICAL2O94851 1124 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 APOC2P02655 101 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 ZNF286BP0CG31 522 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 KRT15P19012 456 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 ATP4AP20648 1035 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 GABRB2P47870 512 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 GUCY2FP51841 1108 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 SETDB1Q15047 1291 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 Q3C1V9 767 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 NKD2Q969F2 451 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 TXNRD2Q9NNW7 524 aa10.61□□□□□ -0.71
TRAPPC8-211ENST00000582539 TYW5A2RUC4 315 aaKnown RBP10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 RCCD1A6NED2 376 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 SNAI1O95863 264 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 PPP2R2AP63151 447 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 IZUMO3Q5VZ72 239 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 SCYL2Q6P3W7 929 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 DCLRE1AQ6PJP8 1040 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 CCDC121Q6ZUS5 278 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 SMC6Q96SB8 1091 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 C16orf70Q9BSU1 422 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 ACTR5Q9H9F9 607 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 POLD4Q9HCU8 107 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 SNTG2Q9NY99 539 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 PTPRJQ12913 1337 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 KRT37O76014 449 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 RTN3O95197 1032 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 VTNP04004 478 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 ATP5BP06576 529 aaKnown RBP10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 CHRNB2P17787 502 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 RNASE9P60153 205 aaKnown RBP10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 PDCLQ13371 301 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 PLD1Q13393 1074 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 LRRC31Q6UY01 552 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 BEND5Q7L4P6 421 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 CENPTQ96BT3 561 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 PI4K2AQ9BTU6 479 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 APOL6Q9BWW8 343 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 CNGB3Q9NQW8 809 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 OR6C75A6NL08 312 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 NDUFAB1O14561 156 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 FKTNO75072 461 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 KRT38O76015 456 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 RECQL4O94761 1208 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 ACO1P21399 889 aaKnown RBP10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 NKX3-2P78367 333 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 SKOR1P84550 965 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 IFRD2Q12894 506 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 GKAP1Q5VSY0 366 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 SPATA2LQ8IUW3 424 aaPredicted RBP10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 FAM149B1Q96BN6 582 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 CALN1Q9BXU9 219 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 MAFFQ9ULX9 164 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 SCAF8Q9UPN6 1271 aaKnown RBP10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 DUSP10Q9Y6W6 482 aa10.6□□□□□ -0.71
TRAPPC8-211ENST00000582539 SF3B1O75533 1304 aaKnown RBP eCLIP10.59□□□□□ -0.713e-6■■■■■ 78.9
TRAPPC8-211ENST00000582539 CYB561D2O14569 222 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 TRIM66O15016 1216 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 MDM4O15151 490 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 ZNF185O15231 689 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 HNRNPCL1O60812 293 aaKnown RBP10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 APOEP02649 317 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 KRT10P13645 584 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 CA4P22748 312 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 NOS2P35228 1153 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 HADHAP40939 763 aa10.59□□□□□ -0.71
TRAPPC8-211ENST00000582539 RASSF2P50749 326 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms