RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 HEMGNQ9BXL5 484 aa23.86■■□□□ 1.41
CCDC47-204ENST00000582252 TSPYL1Q9H0U9 437 aa23.86■■□□□ 1.41
CCDC47-204ENST00000582252 STARD7Q9NQZ5 370 aa23.86■■□□□ 1.41
CCDC47-204ENST00000582252 CHST7Q9NS84 486 aa23.86■■□□□ 1.41
CCDC47-204ENST00000582252 TUBGCP4Q9UGJ1 667 aa23.86■■□□□ 1.41
CCDC47-204ENST00000582252 ASIC3Q9UHC3 531 aa23.86■■□□□ 1.41
CCDC47-204ENST00000582252 OGDHLQ9ULD0 1010 aa23.86■■□□□ 1.41
CCDC47-204ENST00000582252 KIAA0100Q14667 2235 aaKnown RBP23.85■■□□□ 1.41
CCDC47-204ENST00000582252 A6NNZ2 444 aa23.85■■□□□ 1.41
CCDC47-204ENST00000582252 HMGB1P1B2RPK0 211 aaPredicted RBP23.85■■□□□ 1.41
CCDC47-204ENST00000582252 MYCP01106 439 aaPredicted RBP23.85■■□□□ 1.41
CCDC47-204ENST00000582252 KRT14P02533 472 aa23.85■■□□□ 1.41
CCDC47-204ENST00000582252 ERBB2P04626 1255 aa23.85■■□□□ 1.41
CCDC47-204ENST00000582252 MYZAPP0CAP1 466 aa23.85■■□□□ 1.41
CCDC47-204ENST00000582252 KCNE1P15382 129 aa23.85■■□□□ 1.41
CCDC47-204ENST00000582252 RFC1P35251 1148 aaPredicted RBP23.85■■□□□ 1.41
CCDC47-204ENST00000582252 FLT3P36888 993 aa23.85■■□□□ 1.41
CCDC47-204ENST00000582252 CAV1Q03135 178 aa23.85■■□□□ 1.41
CCDC47-204ENST00000582252 SNX1Q13596 522 aa23.85■■□□□ 1.41
CCDC47-204ENST00000582252 UAP1Q16222 522 aaPredicted RBP23.85■■□□□ 1.41
CCDC47-204ENST00000582252 TUBB8Q3ZCM7 444 aa23.85■■□□□ 1.41
CCDC47-204ENST00000582252 CEP85LQ5SZL2 805 aa23.85■■□□□ 1.41
CCDC47-204ENST00000582252 RPAINQ86UA6 219 aa23.85■■□□□ 1.41
CCDC47-204ENST00000582252 FBXO25Q8TCJ0 367 aa23.85■■□□□ 1.41
CCDC47-204ENST00000582252 ART4Q93070 314 aa23.85■■□□□ 1.41
CCDC47-204ENST00000582252 RNF25Q96BH1 459 aaPredicted RBP23.85■■□□□ 1.41
CCDC47-204ENST00000582252 SEZ6LQ9BYH1 1024 aa23.85■■□□□ 1.41
CCDC47-204ENST00000582252 TXLNGYQ9BZA5 131 aa23.85■■□□□ 1.41
CCDC47-204ENST00000582252 METTL5Q9NRN9 209 aaKnown RBP23.85■■□□□ 1.41
CCDC47-204ENST00000582252 TSPAN16Q9UKR8 245 aa23.85■■□□□ 1.41
CCDC47-204ENST00000582252 HES2Q9Y543 173 aa23.85■■□□□ 1.41
CCDC47-204ENST00000582252 ITIH2P19823 946 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 CYP3A5P20815 502 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 PMS2P54278 862 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 LLGL1Q15334 1064 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 PTGISQ16647 500 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 TTMPQ5BVD1 217 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 XKR4Q5GH76 650 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 SPOCD1Q6ZMY3 1216 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 DPH6Q7L8W6 267 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 BBOF1Q8ND07 529 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 TMEM40Q8WWA1 233 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 SNF8Q96H20 258 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 ZNF333Q96JL9 665 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 ATP8A1Q9Y2Q0 1164 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 RNF8O76064 485 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 TFDP3Q5H9I0 405 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 ZNF365Q70YC5 407 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 CCHCR1Q8TD31 782 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 ARL8AQ96BM9 186 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 ASNSD1Q9NWL6 643 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 HESX1Q9UBX0 185 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 NOD1Q9Y239 953 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 EFR3BQ9Y2G0 817 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 SCN1AP35498 2009 aa23.84■■□□□ 1.41
CCDC47-204ENST00000582252 DESP17661 470 aa23.83■■□□□ 1.41
CCDC47-204ENST00000582252 AKAP5P24588 427 aa23.83■■□□□ 1.41
CCDC47-204ENST00000582252 MRPS6P82932 125 aaKnown RBP23.83■■□□□ 1.41
CCDC47-204ENST00000582252 GOLGA7BQ2TAP0 167 aa23.83■■□□□ 1.41
CCDC47-204ENST00000582252 SV2CQ496J9 727 aa23.83■■□□□ 1.41
CCDC47-204ENST00000582252 GLRA4Q5JXX5 417 aa23.83■■□□□ 1.41
CCDC47-204ENST00000582252 FBXO47Q5MNV8 452 aa23.83■■□□□ 1.41
CCDC47-204ENST00000582252 UBXN11Q5T124 520 aa23.83■■□□□ 1.41
CCDC47-204ENST00000582252 FAM102AQ5T9C2 384 aaPredicted RBP23.83■■□□□ 1.41
CCDC47-204ENST00000582252 DRICH1Q6PGQ1 229 aaPredicted RBP23.83■■□□□ 1.41
CCDC47-204ENST00000582252 HACE1Q8IYU2 909 aa23.83■■□□□ 1.41
CCDC47-204ENST00000582252 CCDC89Q8N998 374 aa23.83■■□□□ 1.41
CCDC47-204ENST00000582252 JOSD2Q8TAC2 188 aa23.83■■□□□ 1.41
CCDC47-204ENST00000582252 ATG4AQ8WYN0 398 aa23.83■■□□□ 1.41
CCDC47-204ENST00000582252 C18orf25Q96B23 403 aaPredicted RBP23.83■■□□□ 1.41
CCDC47-204ENST00000582252 ARMC5Q96C12 935 aa23.83■■□□□ 1.41
CCDC47-204ENST00000582252 ATP6V1G3Q96LB4 118 aa23.83■■□□□ 1.41
CCDC47-204ENST00000582252 HERPUD2Q9BSE4 406 aa23.83■■□□□ 1.41
CCDC47-204ENST00000582252 TRPV2Q9Y5S1 764 aa23.83■■□□□ 1.41
CCDC47-204ENST00000582252 SMIM28A0A1B0GU29 152 aa23.82■■□□□ 1.4
CCDC47-204ENST00000582252 H0YGN5 161 aa23.82■■□□□ 1.4
CCDC47-204ENST00000582252 ATF2P15336 505 aa23.82■■□□□ 1.4
CCDC47-204ENST00000582252 CAPN2P17655 700 aa23.82■■□□□ 1.4
CCDC47-204ENST00000582252 MFSD7Q6UXD7 560 aa23.82■■□□□ 1.4
CCDC47-204ENST00000582252 CROCCP2Q86T23 111 aa23.82■■□□□ 1.4
CCDC47-204ENST00000582252 SLC43A3Q8NBI5 491 aa23.82■■□□□ 1.4
CCDC47-204ENST00000582252 UBA3Q8TBC4 463 aa23.82■■□□□ 1.4
CCDC47-204ENST00000582252 MRPL45Q9BRJ2 306 aaKnown RBP23.82■■□□□ 1.4
CCDC47-204ENST00000582252 TMBIM4Q9HC24 238 aa23.82■■□□□ 1.4
CCDC47-204ENST00000582252 IPPQ9Y573 584 aa23.82■■□□□ 1.4
CCDC47-204ENST00000582252 NFS1Q9Y697 457 aa23.82■■□□□ 1.4
CCDC47-204ENST00000582252 LRRD1A4D1F6 860 aa23.81■■□□□ 1.4
CCDC47-204ENST00000582252 PIRO00625 290 aa23.81■■□□□ 1.4
CCDC47-204ENST00000582252 CAPN15O75808 1086 aa23.81■■□□□ 1.4
CCDC47-204ENST00000582252 TAF6P49848 677 aa23.81■■□□□ 1.4
CCDC47-204ENST00000582252 IFFO1Q0D2I5 559 aa23.81■■□□□ 1.4
CCDC47-204ENST00000582252 PTK7Q13308 1070 aa23.81■■□□□ 1.4
CCDC47-204ENST00000582252 DENND2CQ68D51 928 aa23.81■■□□□ 1.4
CCDC47-204ENST00000582252 TWF2Q6IBS0 349 aaKnown RBP23.81■■□□□ 1.4
CCDC47-204ENST00000582252 LEKR1Q6ZMV7 388 aa23.81■■□□□ 1.4
CCDC47-204ENST00000582252 OR6B3Q8NGW1 331 aa23.81■■□□□ 1.4
CCDC47-204ENST00000582252 FRMD8P1Q9BZ68 369 aaPredicted RBP23.81■■□□□ 1.4
CCDC47-204ENST00000582252 PABPC3Q9H361 631 aaKnown RBP23.81■■□□□ 1.4
CCDC47-204ENST00000582252 GDAP2Q9NXN4 497 aa23.81■■□□□ 1.4
CCDC47-204ENST00000582252 TJP2Q9UDY2 1190 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms