RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 GTF2BQ00403 316 aa20.56■□□□□ 0.88
NDEL1-209ENST00000580738 GAB4Q2WGN9 574 aa20.56■□□□□ 0.88
NDEL1-209ENST00000580738 SCARA3Q6AZY7 606 aa20.56■□□□□ 0.88
NDEL1-209ENST00000580738 TMEM92Q6UXU6 159 aa20.56■□□□□ 0.88
NDEL1-209ENST00000580738 ARMCX6Q7L4S7 300 aa20.56■□□□□ 0.88
NDEL1-209ENST00000580738 SFTPA1Q8IWL2 248 aa20.56■□□□□ 0.88
NDEL1-209ENST00000580738 TMEFF1Q8IYR6 380 aa20.56■□□□□ 0.88
NDEL1-209ENST00000580738 CCDC26Q8TAB7 109 aa20.56■□□□□ 0.88
NDEL1-209ENST00000580738 OLIG1Q8TAK6 271 aa20.56■□□□□ 0.88
NDEL1-209ENST00000580738 LEO1Q8WVC0 666 aaPredicted RBP20.56■□□□□ 0.88
NDEL1-209ENST00000580738 FNBP1Q96RU3 617 aa20.56■□□□□ 0.88
NDEL1-209ENST00000580738 PKMYT1Q99640 499 aa20.56■□□□□ 0.88
NDEL1-209ENST00000580738 ZHX3Q9H4I2 956 aa20.56■□□□□ 0.88
NDEL1-209ENST00000580738 PARVGQ9HBI0 331 aa20.56■□□□□ 0.88
NDEL1-209ENST00000580738 GTF3C4Q9UKN8 822 aa20.56■□□□□ 0.88
NDEL1-209ENST00000580738 AGO2Q9UKV8 859 aaKnown RBP20.56■□□□□ 0.88
NDEL1-209ENST00000580738 CIZ1Q9ULV3 898 aaPredicted RBP20.56■□□□□ 0.88
NDEL1-209ENST00000580738 PTGER3P43115 390 aa20.55■□□□□ 0.88
NDEL1-209ENST00000580738 ZXDBP98169 803 aa20.55■□□□□ 0.88
NDEL1-209ENST00000580738 LMAN2Q12907 356 aa20.55■□□□□ 0.88
NDEL1-209ENST00000580738 CRELD2Q6UXH1 353 aaPredicted RBP20.55■□□□□ 0.88
NDEL1-209ENST00000580738 ACBD6Q9BR61 282 aa20.55■□□□□ 0.88
NDEL1-209ENST00000580738 ABCB6Q9NP58 842 aa20.55■□□□□ 0.88
NDEL1-209ENST00000580738 DDX43Q9NXZ2 648 aaKnown RBP20.55■□□□□ 0.88
NDEL1-209ENST00000580738 L1RE1Q9UN81 338 aa20.55■□□□□ 0.88
NDEL1-209ENST00000580738 MSRB2Q9Y3D2 182 aa20.55■□□□□ 0.88
NDEL1-209ENST00000580738 STYXL1Q9Y6J8 313 aa20.55■□□□□ 0.88
NDEL1-209ENST00000580738 FREM2Q5SZK8 3169 aa20.55■□□□□ 0.88
NDEL1-209ENST00000580738 HCRTO43612 131 aa20.54■□□□□ 0.88
NDEL1-209ENST00000580738 ENGP17813 658 aa20.54■□□□□ 0.88
NDEL1-209ENST00000580738 HDCP19113 662 aa20.54■□□□□ 0.88
NDEL1-209ENST00000580738 P2RY2P41231 377 aa20.54■□□□□ 0.88
NDEL1-209ENST00000580738 WNT7BP56706 349 aa20.54■□□□□ 0.88
NDEL1-209ENST00000580738 SIM1P81133 766 aaPredicted RBP20.54■□□□□ 0.88
NDEL1-209ENST00000580738 MESP2Q0VG99 397 aa20.54■□□□□ 0.88
NDEL1-209ENST00000580738 INTS6LQ5JSJ4 861 aaKnown RBP20.54■□□□□ 0.88
NDEL1-209ENST00000580738 LPCAT2Q7L5N7 544 aa20.54■□□□□ 0.88
NDEL1-209ENST00000580738 ALLCQ8N6M5 410 aa20.54■□□□□ 0.88
NDEL1-209ENST00000580738 NUSAP1Q9BXS6 441 aaKnown RBP20.54■□□□□ 0.88
NDEL1-209ENST00000580738 SLC32A1Q9H598 525 aa20.54■□□□□ 0.88
NDEL1-209ENST00000580738 MBD1Q9UIS9 605 aaPredicted RBP20.54■□□□□ 0.88
NDEL1-209ENST00000580738 TULP1O00294 542 aaPredicted RBP20.53■□□□□ 0.88
NDEL1-209ENST00000580738 TNFRSF10BO14763 440 aa20.53■□□□□ 0.88
NDEL1-209ENST00000580738 MAP3K13O43283 966 aa20.53■□□□□ 0.88
NDEL1-209ENST00000580738 NFATC1O95644 943 aa20.53■□□□□ 0.88
NDEL1-209ENST00000580738 KCNB1Q14721 858 aa20.53■□□□□ 0.88
NDEL1-209ENST00000580738 PIP4P1Q86T03 277 aa20.53■□□□□ 0.88
NDEL1-209ENST00000580738 SYT12Q8IV01 421 aa20.53■□□□□ 0.88
NDEL1-209ENST00000580738 SCN4BQ8IWT1 228 aa20.53■□□□□ 0.88
NDEL1-209ENST00000580738 FAM84AQ96KN4 292 aa20.53■□□□□ 0.88
NDEL1-209ENST00000580738 ZNF560Q96MR9 790 aa20.53■□□□□ 0.88
NDEL1-209ENST00000580738 FSCN3Q9NQT6 498 aa20.53■□□□□ 0.88
NDEL1-209ENST00000580738 BLOC1S4Q9NUP1 217 aa20.53■□□□□ 0.88
NDEL1-209ENST00000580738 ARHGAP26Q9UNA1 814 aa20.53■□□□□ 0.88
NDEL1-209ENST00000580738 LAMA5O15230 3695 aa20.53■□□□□ 0.88
NDEL1-209ENST00000580738 ATXN2Q99700 1313 aaKnown RBP20.53■□□□□ 0.88
NDEL1-209ENST00000580738 SGK1O00141 431 aa20.52■□□□□ 0.88
NDEL1-209ENST00000580738 TAF4O00268 1085 aa20.52■□□□□ 0.88
NDEL1-209ENST00000580738 KLF8O95600 359 aaPredicted RBP20.52■□□□□ 0.88
NDEL1-209ENST00000580738 CHRM1P11229 460 aaPredicted RBP20.52■□□□□ 0.88
NDEL1-209ENST00000580738 TCF3P15923 654 aa20.52■□□□□ 0.88
NDEL1-209ENST00000580738 POLR2BP30876 1174 aaKnown RBP20.52■□□□□ 0.88
NDEL1-209ENST00000580738 SLC6A11P48066 632 aa20.52■□□□□ 0.88
NDEL1-209ENST00000580738 MCM6Q14566 821 aa20.52■□□□□ 0.88
NDEL1-209ENST00000580738 SLFN12LQ6IEE8 588 aa20.52■□□□□ 0.88
NDEL1-209ENST00000580738 OSTM1Q86WC4 334 aa20.52■□□□□ 0.88
NDEL1-209ENST00000580738 FSIP1Q8NA03 581 aa20.52■□□□□ 0.88
NDEL1-209ENST00000580738 IL17RCQ8NAC3 791 aa20.52■□□□□ 0.88
NDEL1-209ENST00000580738 TXNDC5Q8NBS9 432 aaKnown RBP20.52■□□□□ 0.88
NDEL1-209ENST00000580738 AGAP1Q9UPQ3 857 aa20.52■□□□□ 0.88
NDEL1-209ENST00000580738 TCHHQ07283 1943 aa20.52■□□□□ 0.88
NDEL1-209ENST00000580738 GON4LQ3T8J9 2241 aa20.51■□□□□ 0.87
NDEL1-209ENST00000580738 HUS1O60921 280 aa20.51■□□□□ 0.87
NDEL1-209ENST00000580738 ALDH1A2O94788 518 aa20.51■□□□□ 0.87
NDEL1-209ENST00000580738 CYP17A1P05093 508 aa20.51■□□□□ 0.87
NDEL1-209ENST00000580738 ITGB3P05106 788 aa20.51■□□□□ 0.87
NDEL1-209ENST00000580738 KRT18P05783 430 aaKnown RBP20.51■□□□□ 0.87
NDEL1-209ENST00000580738 ADSSP30520 456 aa20.51■□□□□ 0.87
NDEL1-209ENST00000580738 TIE1P35590 1138 aa20.51■□□□□ 0.87
NDEL1-209ENST00000580738 PNPLA4P41247 253 aa20.51■□□□□ 0.87
NDEL1-209ENST00000580738 FAM193AP78312 1265 aa20.51■□□□□ 0.87
NDEL1-209ENST00000580738 MRPS21P82921 87 aaKnown RBP20.51■□□□□ 0.87
NDEL1-209ENST00000580738 TFAMQ00059 246 aaKnown RBP20.51■□□□□ 0.87
NDEL1-209ENST00000580738 SEMA3BQ13214 749 aa20.51■□□□□ 0.87
NDEL1-209ENST00000580738 CFAP221Q4G0U5 840 aa20.51■□□□□ 0.87
NDEL1-209ENST00000580738 RILPL1Q5EBL4 403 aa20.51■□□□□ 0.87
NDEL1-209ENST00000580738 EMC10Q5UCC4 262 aa20.51■□□□□ 0.87
NDEL1-209ENST00000580738 MCTP1Q6DN14 999 aa20.51■□□□□ 0.87
NDEL1-209ENST00000580738 SLC23A3Q6PIS1 610 aa20.51■□□□□ 0.87
NDEL1-209ENST00000580738 SPATA2LQ8IUW3 424 aaPredicted RBP20.51■□□□□ 0.87
NDEL1-209ENST00000580738 C1orf127Q8N9H9 656 aa20.51■□□□□ 0.87
NDEL1-209ENST00000580738 ZSWIM2Q8NEG5 633 aa20.51■□□□□ 0.87
NDEL1-209ENST00000580738 ZDHHC4Q9NPG8 344 aa20.51■□□□□ 0.87
NDEL1-209ENST00000580738 PCNX2A6NKB5 2137 aa20.51■□□□□ 0.87
NDEL1-209ENST00000580738 LEFTY2O00292 366 aa20.5■□□□□ 0.87
NDEL1-209ENST00000580738 SCAMP3O14828 347 aaKnown RBP20.5■□□□□ 0.87
NDEL1-209ENST00000580738 IL18RAPO95256 599 aa20.5■□□□□ 0.87
NDEL1-209ENST00000580738 SEC24BO95487 1268 aa20.5■□□□□ 0.87
NDEL1-209ENST00000580738 ITPKAP23677 461 aa20.5■□□□□ 0.87
NDEL1-209ENST00000580738 MYL7Q01449 175 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms