RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 TRAK2O60296 914 aa20.83■□□□□ 0.93
LIMD2-209ENST00000580222 CXCL8P10145 99 aa20.83■□□□□ 0.93
LIMD2-209ENST00000580222 FAM193AP78312 1265 aa20.83■□□□□ 0.93
LIMD2-209ENST00000580222 MYBPC2Q14324 1141 aa20.83■□□□□ 0.93
LIMD2-209ENST00000580222 OVOS1Q6IE37 1185 aa20.83■□□□□ 0.93
LIMD2-209ENST00000580222 CYP2U1Q7Z449 544 aa20.83■□□□□ 0.93
LIMD2-209ENST00000580222 USP37Q86T82 979 aa20.83■□□□□ 0.93
LIMD2-209ENST00000580222 ITIH5Q86UX2 942 aa20.83■□□□□ 0.93
LIMD2-209ENST00000580222 ELOA2Q8IYF1 753 aaPredicted RBP20.83■□□□□ 0.93
LIMD2-209ENST00000580222 MAB21L3Q8N8X9 362 aa20.83■□□□□ 0.93
LIMD2-209ENST00000580222 SPIRE2Q8WWL2 714 aa20.83■□□□□ 0.93
LIMD2-209ENST00000580222 PIGKQ92643 395 aa20.83■□□□□ 0.93
LIMD2-209ENST00000580222 SEPT5Q99719 369 aaPredicted RBP20.83■□□□□ 0.93
LIMD2-209ENST00000580222 OXCT2Q9BYC2 517 aaPredicted RBP20.83■□□□□ 0.93
LIMD2-209ENST00000580222 NUP62CLQ9H1M0 184 aa20.83■□□□□ 0.93
LIMD2-209ENST00000580222 CLSTN2Q9H4D0 955 aa20.83■□□□□ 0.93
LIMD2-209ENST00000580222 GPSM3Q9Y4H4 160 aa20.83■□□□□ 0.93
LIMD2-209ENST00000580222 BPTFQ12830 3046 aa20.82■□□□□ 0.92
LIMD2-209ENST00000580222 PVALEFA0A1B0GWK0 134 aa20.82■□□□□ 0.92
LIMD2-209ENST00000580222 SMC2O95347 1197 aa20.82■□□□□ 0.92
LIMD2-209ENST00000580222 RPN1P04843 607 aaKnown RBP20.82■□□□□ 0.92
LIMD2-209ENST00000580222 NCKAP1LP55160 1127 aa20.82■□□□□ 0.92
LIMD2-209ENST00000580222 CAMK4Q16566 473 aa20.82■□□□□ 0.92
LIMD2-209ENST00000580222 DSTYKQ6XUX3 929 aa20.82■□□□□ 0.92
LIMD2-209ENST00000580222 PIP4P1Q86T03 277 aa20.82■□□□□ 0.92
LIMD2-209ENST00000580222 CHCHD4Q8N4Q1 142 aa20.82■□□□□ 0.92
LIMD2-209ENST00000580222 STKLD1Q8NE28 680 aa20.82■□□□□ 0.92
LIMD2-209ENST00000580222 MRPL44Q9H9J2 332 aaKnown RBP20.82■□□□□ 0.92
LIMD2-209ENST00000580222 TMEM74BQ9NUR3 256 aa20.82■□□□□ 0.92
LIMD2-209ENST00000580222 TBC1D7Q9P0N9 293 aa20.82■□□□□ 0.92
LIMD2-209ENST00000580222 HELZ2Q9BYK8 2649 aaKnown RBP20.81■□□□□ 0.92
LIMD2-209ENST00000580222 H0YCG3 227 aa20.81■□□□□ 0.92
LIMD2-209ENST00000580222 KLRC4O43908 158 aa20.81■□□□□ 0.92
LIMD2-209ENST00000580222 F11P03951 625 aa20.81■□□□□ 0.92
LIMD2-209ENST00000580222 CDC25CP30307 473 aa20.81■□□□□ 0.92
LIMD2-209ENST00000580222 MAPK8P45983 427 aa20.81■□□□□ 0.92
LIMD2-209ENST00000580222 DHPSP49366 369 aaPredicted RBP20.81■□□□□ 0.92
LIMD2-209ENST00000580222 SIM1P81133 766 aaPredicted RBP20.81■□□□□ 0.92
LIMD2-209ENST00000580222 KMT5BQ4FZB7 885 aa20.81■□□□□ 0.92
LIMD2-209ENST00000580222 SLC39A12Q504Y0 691 aa20.81■□□□□ 0.92
LIMD2-209ENST00000580222 FAM26FQ5R3K3 315 aa20.81■□□□□ 0.92
LIMD2-209ENST00000580222 TXNDC8Q6A555 127 aa20.81■□□□□ 0.92
LIMD2-209ENST00000580222 PROSER1Q86XN7 944 aa20.81■□□□□ 0.92
LIMD2-209ENST00000580222 FRMD1Q8N878 549 aa20.81■□□□□ 0.92
LIMD2-209ENST00000580222 ERCC4Q92889 916 aaPredicted RBP20.81■□□□□ 0.92
LIMD2-209ENST00000580222 SMARCE1Q969G3 411 aa20.81■□□□□ 0.92
LIMD2-209ENST00000580222 FSCN3Q9NQT6 498 aa20.81■□□□□ 0.92
LIMD2-209ENST00000580222 OLFML3Q9NRN5 406 aa20.81■□□□□ 0.92
LIMD2-209ENST00000580222 ANKFY1Q9P2R3 1169 aa20.81■□□□□ 0.92
LIMD2-209ENST00000580222 NUP210Q8TEM1 1887 aaPredicted RBP20.81■□□□□ 0.92
LIMD2-209ENST00000580222 ASCC3Q8N3C0 2202 aaKnown RBP20.81■□□□□ 0.92
LIMD2-209ENST00000580222 TTC26A0AVF1 554 aa20.8■□□□□ 0.92
LIMD2-209ENST00000580222 HNRNPLP14866 589 aaKnown RBP eCLIP20.8■□□□□ 0.92
LIMD2-209ENST00000580222 HMGA1P17096 107 aaKnown RBP20.8■□□□□ 0.92
LIMD2-209ENST00000580222 TYMPP19971 482 aa20.8■□□□□ 0.92
LIMD2-209ENST00000580222 PSMD2Q13200 908 aa20.8■□□□□ 0.92
LIMD2-209ENST00000580222 MGAT5BQ3V5L5 792 aa20.8■□□□□ 0.92
LIMD2-209ENST00000580222 FBXO43Q4G163 708 aa20.8■□□□□ 0.92
LIMD2-209ENST00000580222 USP39Q53GS9 565 aaKnown RBP20.8■□□□□ 0.92
LIMD2-209ENST00000580222 LRRTM3Q86VH5 581 aa20.8■□□□□ 0.92
LIMD2-209ENST00000580222 RASSF3Q86WH2 238 aa20.8■□□□□ 0.92
LIMD2-209ENST00000580222 TSTD1Q8NFU3 115 aa20.8■□□□□ 0.92
LIMD2-209ENST00000580222 KIF12Q96FN5 646 aa20.8■□□□□ 0.92
LIMD2-209ENST00000580222 SENP8Q96LD8 212 aa20.8■□□□□ 0.92
LIMD2-209ENST00000580222 BBC3Q96PG8 261 aaPredicted RBP20.8■□□□□ 0.92
LIMD2-209ENST00000580222 ECT2Q9H8V3 914 aa20.8■□□□□ 0.92
LIMD2-209ENST00000580222 TDP1Q9NUW8 608 aa20.8■□□□□ 0.92
LIMD2-209ENST00000580222 FAM221BA6H8Z2 402 aa20.79■□□□□ 0.92
LIMD2-209ENST00000580222 GCNT3O95395 438 aa20.79■□□□□ 0.92
LIMD2-209ENST00000580222 MAPTP10636 758 aaKnown RBP20.79■□□□□ 0.92
LIMD2-209ENST00000580222 TNFSF9P41273 254 aa20.79■□□□□ 0.92
LIMD2-209ENST00000580222 NLRP12P59046 1061 aa20.79■□□□□ 0.92
LIMD2-209ENST00000580222 TRIM61Q5EBN2 209 aa20.79■□□□□ 0.92
LIMD2-209ENST00000580222 ANO7Q6IWH7 933 aa20.79■□□□□ 0.92
LIMD2-209ENST00000580222 PDZD3Q86UT5 571 aa20.79■□□□□ 0.92
LIMD2-209ENST00000580222 TMEM161BQ8NDZ6 487 aa20.79■□□□□ 0.92
LIMD2-209ENST00000580222 RLN3Q8WXF3 142 aa20.79■□□□□ 0.92
LIMD2-209ENST00000580222 HPS3Q969F9 1004 aa20.79■□□□□ 0.92
LIMD2-209ENST00000580222 FIZ1Q96SL8 496 aa20.79■□□□□ 0.92
LIMD2-209ENST00000580222 NTPCRQ9BSD7 190 aaKnown RBP20.79■□□□□ 0.92
LIMD2-209ENST00000580222 RMND1Q9NWS8 449 aa20.79■□□□□ 0.92
LIMD2-209ENST00000580222 HSFX1Q9UBD0 423 aa20.79■□□□□ 0.92
LIMD2-209ENST00000580222 EVLQ9UI08 416 aaPredicted RBP20.79■□□□□ 0.92
LIMD2-209ENST00000580222 MBD1Q9UIS9 605 aaPredicted RBP20.79■□□□□ 0.92
LIMD2-209ENST00000580222 PCDHA5Q9Y5H7 936 aa20.79■□□□□ 0.92
LIMD2-209ENST00000580222 LACTBL1A8MY62 500 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 TOM1L1O75674 476 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 ENGP17813 658 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 ABCD1P33897 745 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 AVPR1AP37288 418 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 PTGER3P43115 390 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 LILRA4P59901 499 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 BFSP1Q12934 665 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 STRN3Q13033 797 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 SEMA3BQ13214 749 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 KCNB1Q14721 858 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 NOLC1Q14978 699 aaKnown RBP eCLIP20.78■□□□□ 0.92
LIMD2-209ENST00000580222 NFKBIBQ15653 356 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 ARMCX5Q6P1M9 558 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 STXBP4Q6ZWJ1 553 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms