RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 ADORA2BP29275 332 aa16.34■□□□□ 0.21
IFT20-208ENST00000578985 EPHA5P54756 1037 aa16.34■□□□□ 0.21
IFT20-208ENST00000578985 MFAP3P55082 362 aa16.34■□□□□ 0.21
IFT20-208ENST00000578985 TPM4P67936 248 aa16.34■□□□□ 0.21
IFT20-208ENST00000578985 ZP2Q05996 745 aa16.34■□□□□ 0.21
IFT20-208ENST00000578985 CYP4A22Q5TCH4 519 aa16.34■□□□□ 0.21
IFT20-208ENST00000578985 TMEM270Q6UE05 265 aa16.34■□□□□ 0.21
IFT20-208ENST00000578985 OTOP3Q7RTS5 596 aa16.34■□□□□ 0.21
IFT20-208ENST00000578985 APTXQ7Z2E3 356 aaKnown RBP16.34■□□□□ 0.21
IFT20-208ENST00000578985 LEMD2Q8NC56 503 aa16.34■□□□□ 0.21
IFT20-208ENST00000578985 ITFG1Q8TB96 612 aa16.34■□□□□ 0.21
IFT20-208ENST00000578985 SLC2A14Q8TDB8 520 aa16.34■□□□□ 0.21
IFT20-208ENST00000578985 JAKMIP2Q96AA8 810 aa16.34■□□□□ 0.21
IFT20-208ENST00000578985 SMARCD1Q96GM5 515 aa16.34■□□□□ 0.21
IFT20-208ENST00000578985 C8orf48Q96LL4 319 aa16.34■□□□□ 0.21
IFT20-208ENST00000578985 NECAB3Q96P71 396 aaPredicted RBP16.34■□□□□ 0.21
IFT20-208ENST00000578985 HNRNPABQ99729 332 aaKnown RBP16.34■□□□□ 0.21
IFT20-208ENST00000578985 LSM14BQ9BX40 385 aaKnown RBP16.34■□□□□ 0.21
IFT20-208ENST00000578985 DENND4CQ5VZ89 1909 aa16.33■□□□□ 0.21
IFT20-208ENST00000578985 ZNF638Q14966 1978 aaKnown RBP16.33■□□□□ 0.21
IFT20-208ENST00000578985 SLC38A8A6NNN8 435 aa16.33■□□□□ 0.2
IFT20-208ENST00000578985 GOLGA6L19H0YKK7 550 aa16.33■□□□□ 0.2
IFT20-208ENST00000578985 ZNF197O14709 1029 aa16.33■□□□□ 0.2
IFT20-208ENST00000578985 AP1G2O75843 785 aa16.33■□□□□ 0.2
IFT20-208ENST00000578985 CSH1P0DML2 217 aa16.33■□□□□ 0.2
IFT20-208ENST00000578985 CSH2P0DML3 217 aa16.33■□□□□ 0.2
IFT20-208ENST00000578985 MYL4P12829 197 aa16.33■□□□□ 0.2
IFT20-208ENST00000578985 CACNA2D1P54289 1103 aa16.33■□□□□ 0.2
IFT20-208ENST00000578985 ARHGAP44Q17R89 818 aa16.33■□□□□ 0.2
IFT20-208ENST00000578985 SLC5A9Q2M3M2 681 aa16.33■□□□□ 0.2
IFT20-208ENST00000578985 DPY19L2P1Q6NXN4 242 aa16.33■□□□□ 0.2
IFT20-208ENST00000578985 PDZD4Q76G19 769 aaPredicted RBP16.33■□□□□ 0.2
IFT20-208ENST00000578985 GET4Q7L5D6 327 aaPredicted RBP16.33■□□□□ 0.2
IFT20-208ENST00000578985 TMC8Q8IU68 726 aa16.33■□□□□ 0.2
IFT20-208ENST00000578985 TDRD5Q8NAT2 981 aaKnown RBP16.33■□□□□ 0.2
IFT20-208ENST00000578985 RBBP8NLQ8NC74 664 aaPredicted RBP16.33■□□□□ 0.2
IFT20-208ENST00000578985 SPATA17Q96L03 361 aa16.33■□□□□ 0.2
IFT20-208ENST00000578985 LRRC3Q9BY71 257 aa16.33■□□□□ 0.2
IFT20-208ENST00000578985 ZNF334Q9HCZ1 680 aaPredicted RBP16.33■□□□□ 0.2
IFT20-208ENST00000578985 KRT82Q9NSB4 513 aa16.33■□□□□ 0.2
IFT20-208ENST00000578985 TMEM30AQ9NV96 361 aa16.33■□□□□ 0.2
IFT20-208ENST00000578985 DNAJC12Q9UKB3 198 aa16.33■□□□□ 0.2
IFT20-208ENST00000578985 KIAA1257Q9ULG3 409 aa16.33■□□□□ 0.2
IFT20-208ENST00000578985 USTQ9Y2C2 406 aa16.33■□□□□ 0.2
IFT20-208ENST00000578985 MRPS23Q9Y3D9 190 aaKnown RBP16.33■□□□□ 0.2
IFT20-208ENST00000578985 MYO10Q9HD67 2058 aa16.33■□□□□ 0.2
IFT20-208ENST00000578985 C19orf67A6NJJ6 358 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 C2CD4DB7Z1M9 353 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 LOC730098B7Z3J9 87 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 F8VP50 259 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 RNF225M0QZC1 329 aaPredicted RBP16.32■□□□□ 0.2
IFT20-208ENST00000578985 NOL4O94818 638 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 PAEPP09466 180 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 FAM200BP0CF97 657 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 VDRP11473 427 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 KRT5P13647 590 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 CD19P15391 556 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 HMGA1P17096 107 aaKnown RBP16.32■□□□□ 0.2
IFT20-208ENST00000578985 GBP2P32456 591 aaPredicted RBP16.32■□□□□ 0.2
IFT20-208ENST00000578985 UBXN1Q04323 297 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 MTMR3Q13615 1198 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 SGO2Q562F6 1265 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 PRSS36Q5K4E3 855 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 PPP1R26Q5T8A7 1209 aaPredicted RBP16.32■□□□□ 0.2
IFT20-208ENST00000578985 KLHDC7AQ5VTJ3 777 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 ARHGAP17Q68EM7 881 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 STKLD1Q8NE28 680 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 ING5Q8WYH8 240 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 ACSF2Q96CM8 615 aaPredicted RBP16.32■□□□□ 0.2
IFT20-208ENST00000578985 TCEAL4Q96EI5 215 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 CEP295NLQ96MC4 621 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 MYADMQ96S97 322 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 UHRF1Q96T88 793 aaPredicted RBP16.32■□□□□ 0.2
IFT20-208ENST00000578985 DMAP1Q9NPF5 467 aaPredicted RBP16.32■□□□□ 0.2
IFT20-208ENST00000578985 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.32■□□□□ 0.2
IFT20-208ENST00000578985 CNTN6Q9UQ52 1028 aa16.32■□□□□ 0.2
IFT20-208ENST00000578985 FGF19O95750 216 aa16.31■□□□□ 0.2
IFT20-208ENST00000578985 CCR2P41597 374 aa16.31■□□□□ 0.2
IFT20-208ENST00000578985 ZNF132P52740 706 aa16.31■□□□□ 0.2
IFT20-208ENST00000578985 ZNF445P59923 1031 aa16.31■□□□□ 0.2
IFT20-208ENST00000578985 SYCP1Q15431 976 aa16.31■□□□□ 0.2
IFT20-208ENST00000578985 FILIP1LQ4L180 1135 aa16.31■□□□□ 0.2
IFT20-208ENST00000578985 KCNK16Q96T55 309 aa16.31■□□□□ 0.2
IFT20-208ENST00000578985 SMOQ99835 787 aa16.31■□□□□ 0.2
IFT20-208ENST00000578985 PLCB1Q9NQ66 1216 aa16.31■□□□□ 0.2
IFT20-208ENST00000578985 AJAP1Q9UKB5 411 aaPredicted RBP16.31■□□□□ 0.2
IFT20-208ENST00000578985 CDH7Q9ULB5 785 aa16.31■□□□□ 0.2
IFT20-208ENST00000578985 MAGED2Q9UNF1 606 aaPredicted RBP16.31■□□□□ 0.2
IFT20-208ENST00000578985 OBSL1O75147 1896 aa16.31■□□□□ 0.2
IFT20-208ENST00000578985 PATJQ8NI35 1801 aa16.31■□□□□ 0.2
IFT20-208ENST00000578985 MOSPD3O75425 235 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 BEST1O76090 585 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 MICAL2O94851 1124 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 GJA1P17302 382 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 CEBPBP17676 345 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 GABRR2P28476 465 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 SSTR3P32745 418 aaPredicted RBP16.3■□□□□ 0.2
IFT20-208ENST00000578985 USP8P40818 1118 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 KLK7P49862 253 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 MAP3K7CLP57077 242 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms