RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 SLAIN1Q8ND83 568 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 UBA3Q8TBC4 463 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 C18orf25Q96B23 403 aaPredicted RBP11.7□□□□□ -0.54
SKA2-204ENST00000578519 CCDC114Q96M63 670 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 SLITRK1Q96PX8 696 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 TWNKQ96RR1 684 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 MRPL45Q9BRJ2 306 aaKnown RBP11.7□□□□□ -0.54
SKA2-204ENST00000578519 SLC4A5Q9BY07 1137 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 ARHGAP39Q9C0H5 1083 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 RSAD1Q9HA92 442 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 PRDM16Q9HAZ2 1276 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 PSD3Q9NYI0 1048 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 KLK14Q9P0G3 267 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 VPS18Q9P253 973 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 ASIC3Q9UHC3 531 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 DSEQ9UL01 958 aa11.7□□□□□ -0.54
SKA2-204ENST00000578519 LRRD1A4D1F6 860 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 F8VP50 259 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 SMAPO00193 183 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 DPYSL4O14531 572 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 CYB561D2O14569 222 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 PRPSAP2O60256 369 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 RNF40O75150 1001 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 ZNF189O75820 626 aaPredicted RBP11.69□□□□□ -0.54
SKA2-204ENST00000578519 ATF2P15336 505 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 PDGFRAP16234 1089 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 PCSK1P29120 753 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 SDC4P31431 198 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 GGCXP38435 758 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 LILRA4P59901 499 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 IRX5P78411 483 aaPredicted RBP11.69□□□□□ -0.54
SKA2-204ENST00000578519 MGAT3Q09327 533 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 IFFO1Q0D2I5 559 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 PTK6Q13882 451 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 PDK2Q15119 407 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 PPP1R26Q5T8A7 1209 aaPredicted RBP11.69□□□□□ -0.54
SKA2-204ENST00000578519 AADACL2Q6P093 401 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 MAMSTRQ6ZN01 415 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 LIMS2Q7Z4I7 341 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 PCGF5Q86SE9 256 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 VSIG1Q86XK7 387 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 IQCKQ8N0W5 287 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 ARFGAP2Q8N6H7 521 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 FAM76AQ8TAV0 307 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 UBLCP1Q8WVY7 318 aaPredicted RBP11.69□□□□□ -0.54
SKA2-204ENST00000578519 RNF25Q96BH1 459 aaPredicted RBP11.69□□□□□ -0.54
SKA2-204ENST00000578519 SNF8Q96H20 258 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 GDAP1L1Q96MZ0 367 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 PPP1R10Q96QC0 940 aaKnown RBP11.69□□□□□ -0.54
SKA2-204ENST00000578519 TBCBQ99426 244 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 HINFPQ9BQA5 517 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 TRIM31Q9BZY9 425 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 TRIM7Q9C029 511 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 STMN4Q9H169 189 aaPredicted RBP11.69□□□□□ -0.54
SKA2-204ENST00000578519 TSPYL2Q9H2G4 693 aaPredicted RBP11.69□□□□□ -0.54
SKA2-204ENST00000578519 ERVK-5Q9HDB9 667 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 HMX1Q9NP08 348 aaPredicted RBP11.69□□□□□ -0.54
SKA2-204ENST00000578519 TMEM51Q9NW97 253 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 SNX24Q9Y343 169 aa11.69□□□□□ -0.54
SKA2-204ENST00000578519 GOLGA6CA6NDK9 693 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 HMGB1P1B2RPK0 211 aaPredicted RBP11.68□□□□□ -0.54
SKA2-204ENST00000578519 PPFIA2O75334 1257 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 CHRNA1P02708 482 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 MYZAPP0CAP1 466 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 GOLGA6DP0CG33 693 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 ZFXP17010 805 aaPredicted RBP11.68□□□□□ -0.54
SKA2-204ENST00000578519 CCND3P30281 292 aaPredicted RBP11.68□□□□□ -0.54
SKA2-204ENST00000578519 ADCY8P40145 1251 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 PLTPP55058 493 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 KRT17Q04695 432 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 DHX9Q08211 1270 aaKnown RBP11.68□□□□□ -0.54
SKA2-204ENST00000578519 KLF1Q13351 362 aaPredicted RBP11.68□□□□□ -0.54
SKA2-204ENST00000578519 ORC1Q13415 861 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 SIX1Q15475 284 aaPredicted RBP11.68□□□□□ -0.54
SKA2-204ENST00000578519 TERF2Q15554 542 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 PKDCCQ504Y2 493 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 MAP3K21Q5TCX8 1036 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 SCARA3Q6AZY7 606 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 CCSAPQ6IQ19 270 aaPredicted RBP11.68□□□□□ -0.54
SKA2-204ENST00000578519 TRMT10CQ7L0Y3 403 aaKnown RBP11.68□□□□□ -0.54
SKA2-204ENST00000578519 HOOK3Q86VS8 718 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 SLC35F5Q8WV83 523 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 TEKT4Q8WW24 435 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 C1orf54Q8WWF1 131 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 RXFP2Q8WXD0 754 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 ZIC5Q96T25 663 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 HNRNPABQ99729 332 aaKnown RBP11.68□□□□□ -0.54
SKA2-204ENST00000578519 TRIM51Q9BSJ1 452 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 HEMGNQ9BXL5 484 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 PLEKHA4Q9H4M7 779 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 RNF186Q9NXI6 227 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 GOLGA6AQ9NYA3 693 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 HMGXB4Q9UGU5 601 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 ANAPC5Q9UJX4 755 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 PADI3Q9ULW8 664 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 USP18Q9UMW8 372 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 ZNF148Q9UQR1 794 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 NR2E1Q9Y466 385 aa11.68□□□□□ -0.54
SKA2-204ENST00000578519 hCG_1818297A0A087WSY0 165 aa11.67□□□□□ -0.54
SKA2-204ENST00000578519 A0A0U1RQF3 1178 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms