RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 GMEB2Q9UKD1 530 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 MYO16Q9Y6X6 1858 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 MYOFQ9NZM1 2061 aa15.98■□□□□ 0.15
RN7SL560P-201ENST00000577943 CEP250Q9BV73 2442 aa15.97■□□□□ 0.15
RN7SL560P-201ENST00000577943 CST3P01034 146 aaPredicted RBP15.97■□□□□ 0.15
RN7SL560P-201ENST00000577943 BDNFP23560 247 aa15.97■□□□□ 0.15
RN7SL560P-201ENST00000577943 GRIK1P39086 918 aa15.97■□□□□ 0.15
RN7SL560P-201ENST00000577943 CYP27A1Q02318 531 aa15.97■□□□□ 0.15
RN7SL560P-201ENST00000577943 DNM1Q05193 864 aaKnown RBP15.97■□□□□ 0.15
RN7SL560P-201ENST00000577943 CUL4BQ13620 913 aa15.97■□□□□ 0.15
RN7SL560P-201ENST00000577943 PKP1Q13835 747 aa15.97■□□□□ 0.15
RN7SL560P-201ENST00000577943 CCINQ13939 588 aa15.97■□□□□ 0.15
RN7SL560P-201ENST00000577943 ZNF268Q14587 947 aaPredicted RBP15.97■□□□□ 0.15
RN7SL560P-201ENST00000577943 GRAMD1CQ8IYS0 662 aa15.97■□□□□ 0.15
RN7SL560P-201ENST00000577943 SYNPOQ8N3V7 929 aa15.97■□□□□ 0.15
RN7SL560P-201ENST00000577943 GPR161Q8N6U8 529 aaKnown RBP15.97■□□□□ 0.15
RN7SL560P-201ENST00000577943 TTC16Q8NEE8 873 aa15.97■□□□□ 0.15
RN7SL560P-201ENST00000577943 SNX25Q9H3E2 840 aa15.97■□□□□ 0.15
RN7SL560P-201ENST00000577943 CRTAC1Q9NQ79 661 aa15.97■□□□□ 0.15
RN7SL560P-201ENST00000577943 HPS4Q9NQG7 708 aa15.97■□□□□ 0.15
RN7SL560P-201ENST00000577943 CGNQ9P2M7 1197 aaKnown RBP15.97■□□□□ 0.15
RN7SL560P-201ENST00000577943 TRAV19A0A0A6YYK7 116 aa15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 CHURC1-FNTBB4DL54 471 aa15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 USP17L7P0C7H9 530 aa15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 ARSAP15289 507 aa15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 ANXA13P27216 316 aa15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 GNL1P36915 607 aaPredicted RBP15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 FNTBP49356 437 aa15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 TNNC1P63316 161 aa15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 AMPD2Q01433 879 aa15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 FAM160A1Q05DH4 1040 aa15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 GRSF1Q12849 480 aaKnown RBP eCLIP15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 TRPC3Q13507 836 aa15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 LPAL2Q16609 132 aa15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 KNOP1Q1ED39 458 aaKnown RBP15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 WDR72Q3MJ13 1102 aa15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 VSTM1Q6UX27 236 aa15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 PRR23BQ6ZRT6 265 aa15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 C12orf56Q8IXR9 622 aa15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 OR6B3Q8NGW1 331 aa15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 RIN3Q8TB24 985 aa15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 CYP2S1Q96SQ9 504 aa15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 MRPL45Q9BRJ2 306 aaKnown RBP15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 SERTAD1Q9UHV2 236 aa15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 EML5Q05BV3 1969 aa15.96■□□□□ 0.15
RN7SL560P-201ENST00000577943 OTOL1A6NHN0 477 aaPredicted RBP15.95■□□□□ 0.14
RN7SL560P-201ENST00000577943 K7ESF4 209 aa15.95■□□□□ 0.14
RN7SL560P-201ENST00000577943 EXOC3O60645 756 aa15.95■□□□□ 0.14
RN7SL560P-201ENST00000577943 PHACTR2O75167 634 aa15.95■□□□□ 0.14
RN7SL560P-201ENST00000577943 PAPSS2O95340 614 aaPredicted RBP15.95■□□□□ 0.14
RN7SL560P-201ENST00000577943 CKMP06732 381 aa15.95■□□□□ 0.14
RN7SL560P-201ENST00000577943 DMWDQ09019 674 aa15.95■□□□□ 0.14
RN7SL560P-201ENST00000577943 KCNB1Q14721 858 aa15.95■□□□□ 0.14
RN7SL560P-201ENST00000577943 MTF1Q14872 753 aa15.95■□□□□ 0.14
RN7SL560P-201ENST00000577943 PDGFRLQ15198 375 aa15.95■□□□□ 0.14
RN7SL560P-201ENST00000577943 BMT2Q1RMZ1 405 aa15.95■□□□□ 0.14
RN7SL560P-201ENST00000577943 MDH1BQ5I0G3 518 aa15.95■□□□□ 0.14
RN7SL560P-201ENST00000577943 HEATR6Q6AI08 1181 aaKnown RBP15.95■□□□□ 0.14
RN7SL560P-201ENST00000577943 ARL14EPQ8N8R7 260 aaPredicted RBP15.95■□□□□ 0.14
RN7SL560P-201ENST00000577943 MYCBPAPQ8TBZ2 947 aa15.95■□□□□ 0.14
RN7SL560P-201ENST00000577943 PCED1BQ96HM7 432 aa15.95■□□□□ 0.14
RN7SL560P-201ENST00000577943 SPATA17Q96L03 361 aa15.95■□□□□ 0.14
RN7SL560P-201ENST00000577943 SLC22A12Q96S37 553 aa15.95■□□□□ 0.14
RN7SL560P-201ENST00000577943 EXOC1Q9NV70 894 aa15.95■□□□□ 0.14
RN7SL560P-201ENST00000577943 RCOR1Q9UKL0 485 aa15.95■□□□□ 0.14
RN7SL560P-201ENST00000577943 KIAA1549LQ6ZVL6 1849 aa15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 C2orf78A6NCI8 922 aa15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 TRDMT1O14717 391 aaKnown RBP15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 TRIM66O15016 1216 aa15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 TACC1O75410 805 aa15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 CLSTN1O94985 981 aa15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 FAM163BP0C2L3 166 aa15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 SLFN14P0C7P3 912 aa15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 IFNAR2P48551 515 aa15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 MYL6P60660 151 aa15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 SIM2Q14190 667 aaPredicted RBP15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 PUM1Q14671 1186 aaKnown RBP eCLIP15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 ZNF77Q15935 545 aa15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 TMEM196Q5HYL7 178 aa15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 DENND5BQ6ZUT9 1274 aa15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 DGLUCYQ7Z3D6 616 aa15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 LONP2Q86WA8 852 aa15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 CPA6Q8N4T0 437 aa15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 GOLGA5Q8TBA6 731 aa15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 ZNF516Q92618 1163 aa15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 SYAP1Q96A49 352 aaPredicted RBP15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 CEP295NLQ96MC4 621 aa15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 C2orf42Q9NWW7 574 aa15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 DUS2Q9NX74 493 aaKnown RBP15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 NXF1Q9UBU9 619 aaKnown RBP15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 USP18Q9UMW8 372 aa15.94■□□□□ 0.14
RN7SL560P-201ENST00000577943 DNAH14Q0VDD8 3507 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 A8MXQ7 604 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 KLRC4O43908 158 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 PTPN1P18031 435 aaKnown RBP15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 HDCP19113 662 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 ATICP31939 592 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 CNR2P34972 360 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 CASP4P49662 377 aa15.93■□□□□ 0.14
RN7SL560P-201ENST00000577943 PDE6CP51160 858 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms