RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 CDR1P51861 262 aa17.16■□□□□ 0.34
VAPA-204ENST00000577901 PLCB2Q00722 1185 aa17.16■□□□□ 0.34
VAPA-204ENST00000577901 TNK2Q07912 1038 aa17.16■□□□□ 0.34
VAPA-204ENST00000577901 CCINQ13939 588 aa17.16■□□□□ 0.34
VAPA-204ENST00000577901 CSRP2Q16527 193 aa17.16■□□□□ 0.34
VAPA-204ENST00000577901 ZNF658Q5TYW1 1059 aaPredicted RBP17.16■□□□□ 0.34
VAPA-204ENST00000577901 GCNAQ96QF7 691 aa17.16■□□□□ 0.34
VAPA-204ENST00000577901 THG1LQ9NWX6 298 aaKnown RBP17.16■□□□□ 0.34
VAPA-204ENST00000577901 FRMD4BQ9Y2L6 1034 aa17.16■□□□□ 0.34
VAPA-204ENST00000577901 SLC30A4O14863 429 aa17.15■□□□□ 0.34
VAPA-204ENST00000577901 MYO1EQ12965 1108 aa17.15■□□□□ 0.34
VAPA-204ENST00000577901 TAF12Q16514 161 aa17.15■□□□□ 0.34
VAPA-204ENST00000577901 NFIL3Q16649 462 aa17.15■□□□□ 0.34
VAPA-204ENST00000577901 ITPRIPL2Q3MIP1 535 aa17.15■□□□□ 0.34
VAPA-204ENST00000577901 CEP135Q66GS9 1140 aa17.15■□□□□ 0.34
VAPA-204ENST00000577901 LMBRD2Q68DH5 695 aaPredicted RBP17.15■□□□□ 0.34
VAPA-204ENST00000577901 PRR23CQ6ZRP0 262 aa17.15■□□□□ 0.34
VAPA-204ENST00000577901 THEM5Q8N1Q8 247 aa17.15■□□□□ 0.34
VAPA-204ENST00000577901 SYNPOQ8N3V7 929 aa17.15■□□□□ 0.34
VAPA-204ENST00000577901 OR5B17Q8NGF7 314 aa17.15■□□□□ 0.34
VAPA-204ENST00000577901 SPATA20Q8TB22 786 aa17.15■□□□□ 0.34
VAPA-204ENST00000577901 GIPC2Q8TF65 315 aa17.15■□□□□ 0.34
VAPA-204ENST00000577901 IPO9Q96P70 1041 aaKnown RBP17.15■□□□□ 0.34
VAPA-204ENST00000577901 CGRRF1Q99675 332 aa17.15■□□□□ 0.34
VAPA-204ENST00000577901 SLC46A2Q9BY10 475 aa17.15■□□□□ 0.34
VAPA-204ENST00000577901 SMG9Q9H0W8 520 aaKnown RBP17.15■□□□□ 0.34
VAPA-204ENST00000577901 IL21Q9HBE4 155 aa17.15■□□□□ 0.34
VAPA-204ENST00000577901 NUP210Q8TEM1 1887 aaPredicted RBP17.14■□□□□ 0.33
VAPA-204ENST00000577901 HOXA6P31267 233 aa17.14■□□□□ 0.33
VAPA-204ENST00000577901 HOXC13P31276 330 aa17.14■□□□□ 0.33
VAPA-204ENST00000577901 AP3M2P53677 418 aa17.14■□□□□ 0.33
VAPA-204ENST00000577901 CEP68Q76N32 757 aa17.14■□□□□ 0.33
VAPA-204ENST00000577901 TRAPPC11Q7Z392 1133 aa17.14■□□□□ 0.33
VAPA-204ENST00000577901 WDR5BQ86VZ2 330 aa17.14■□□□□ 0.33
VAPA-204ENST00000577901 PIP4P2Q8N4L2 257 aa17.14■□□□□ 0.33
VAPA-204ENST00000577901 FAM160A2Q8N612 972 aaPredicted RBP17.14■□□□□ 0.33
VAPA-204ENST00000577901 C2orf15Q8WU43 125 aaKnown RBP17.14■□□□□ 0.33
VAPA-204ENST00000577901 ERCC4Q92889 916 aaPredicted RBP17.14■□□□□ 0.33
VAPA-204ENST00000577901 TSC2P49815 1807 aa17.14■□□□□ 0.33
VAPA-204ENST00000577901 HUS1O60921 280 aa17.13■□□□□ 0.33
VAPA-204ENST00000577901 ADRB1P08588 477 aa17.13■□□□□ 0.33
VAPA-204ENST00000577901 HAPLN1P10915 354 aaPredicted RBP17.13■□□□□ 0.33
VAPA-204ENST00000577901 NR2F2P24468 414 aa17.13■□□□□ 0.33
VAPA-204ENST00000577901 PRCPP42785 496 aa17.13■□□□□ 0.33
VAPA-204ENST00000577901 SMARCB1Q12824 385 aa17.13■□□□□ 0.33
VAPA-204ENST00000577901 BFSP1Q12934 665 aa17.13■□□□□ 0.33
VAPA-204ENST00000577901 COBLL1Q53SF7 1204 aa17.13■□□□□ 0.33
VAPA-204ENST00000577901 PPM1JQ5JR12 505 aa17.13■□□□□ 0.33
VAPA-204ENST00000577901 LRRTM3Q86VH5 581 aa17.13■□□□□ 0.33
VAPA-204ENST00000577901 SMYD4Q8IYR2 804 aaPredicted RBP17.13■□□□□ 0.33
VAPA-204ENST00000577901 CXorf38Q8TB03 319 aa17.13■□□□□ 0.33
VAPA-204ENST00000577901 SPPL2BQ8TCT7 592 aa17.13■□□□□ 0.33
VAPA-204ENST00000577901 HPDLQ96IR7 371 aa17.13■□□□□ 0.33
VAPA-204ENST00000577901 GKN1Q9NS71 199 aa17.13■□□□□ 0.33
VAPA-204ENST00000577901 GDAP2Q9NXN4 497 aa17.13■□□□□ 0.33
VAPA-204ENST00000577901 ABI2Q9NYB9 513 aaPredicted RBP17.13■□□□□ 0.33
VAPA-204ENST00000577901 SIX4Q9UIU6 781 aa17.13■□□□□ 0.33
VAPA-204ENST00000577901 ZMYM5Q9UJ78 669 aa17.13■□□□□ 0.33
VAPA-204ENST00000577901 PTPRJQ12913 1337 aa17.13■□□□□ 0.33
VAPA-204ENST00000577901 MAPK13O15264 365 aa17.12■□□□□ 0.33
VAPA-204ENST00000577901 GDF9O60383 454 aa17.12■□□□□ 0.33
VAPA-204ENST00000577901 FOXD2O60548 495 aaPredicted RBP17.12■□□□□ 0.33
VAPA-204ENST00000577901 PHACTR2O75167 634 aa17.12■□□□□ 0.33
VAPA-204ENST00000577901 PPP1R2P41236 205 aa17.12■□□□□ 0.33
VAPA-204ENST00000577901 CASP4P49662 377 aa17.12■□□□□ 0.33
VAPA-204ENST00000577901 ADAM9Q13443 819 aa17.12■□□□□ 0.33
VAPA-204ENST00000577901 TRPC3Q13507 836 aa17.12■□□□□ 0.33
VAPA-204ENST00000577901 STIM1Q13586 685 aa17.12■□□□□ 0.33
VAPA-204ENST00000577901 EDRF1Q3B7T1 1238 aa17.12■□□□□ 0.33
VAPA-204ENST00000577901 WSCD1Q658N2 575 aa17.12■□□□□ 0.33
VAPA-204ENST00000577901 CLEC17AQ6ZS10 378 aa17.12■□□□□ 0.33
VAPA-204ENST00000577901 CMTM8Q8IZV2 173 aa17.12■□□□□ 0.33
VAPA-204ENST00000577901 PARD3BQ8TEW8 1205 aa17.12■□□□□ 0.33
VAPA-204ENST00000577901 FAM84AQ96KN4 292 aa17.12■□□□□ 0.33
VAPA-204ENST00000577901 TSG101Q99816 390 aa17.12■□□□□ 0.33
VAPA-204ENST00000577901 SNX9Q9Y5X1 595 aa17.12■□□□□ 0.33
VAPA-204ENST00000577901 PSMC2P35998 433 aaKnown RBP17.11■□□□□ 0.33
VAPA-204ENST00000577901 AVPR1AP37288 418 aa17.11■□□□□ 0.33
VAPA-204ENST00000577901 NLRP12P59046 1061 aa17.11■□□□□ 0.33
VAPA-204ENST00000577901 CLDN10P78369 228 aa17.11■□□□□ 0.33
VAPA-204ENST00000577901 ISM2Q6H9L7 571 aa17.11■□□□□ 0.33
VAPA-204ENST00000577901 DPH6Q7L8W6 267 aa17.11■□□□□ 0.33
VAPA-204ENST00000577901 TMEM150AQ86TG1 271 aa17.11■□□□□ 0.33
VAPA-204ENST00000577901 DCP1BQ8IZD4 617 aaKnown RBP17.11■□□□□ 0.33
VAPA-204ENST00000577901 TMEM86AQ8N2M4 240 aa17.11■□□□□ 0.33
VAPA-204ENST00000577901 TOP6BLQ8N6T0 577 aa17.11■□□□□ 0.33
VAPA-204ENST00000577901 MAB21L3Q8N8X9 362 aa17.11■□□□□ 0.33
VAPA-204ENST00000577901 TMC2Q8TDI7 906 aa17.11■□□□□ 0.33
VAPA-204ENST00000577901 ZNF516Q92618 1163 aa17.11■□□□□ 0.33
VAPA-204ENST00000577901 FAM83CQ9BQN1 747 aa17.11■□□□□ 0.33
VAPA-204ENST00000577901 MAN1B1Q9UKM7 699 aa17.11■□□□□ 0.33
VAPA-204ENST00000577901 CCL26Q9Y258 94 aa17.11■□□□□ 0.33
VAPA-204ENST00000577901 PCDHB5Q9Y5E4 795 aa17.11■□□□□ 0.33
VAPA-204ENST00000577901 ZFHX4Q86UP3 3567 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 SCN1AP35498 2009 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 LRRIQ3A6PVS8 624 aaPredicted RBP17.1■□□□□ 0.33
VAPA-204ENST00000577901 IKBKBO14920 756 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 AXIN1O15169 862 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 CETN3O15182 167 aa17.1■□□□□ 0.33
VAPA-204ENST00000577901 KRT37O76014 449 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms