RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 POLR2BP30876 1174 aaKnown RBP8.93□□□□□ -0.98
RPAIN-215ENST00000575112 RFC1P35251 1148 aaPredicted RBP8.93□□□□□ -0.98
RPAIN-215ENST00000575112 MAGEA4P43358 317 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 PAPOLAP51003 745 aaKnown RBP8.93□□□□□ -0.98
RPAIN-215ENST00000575112 RCN1Q15293 331 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 BMT2Q1RMZ1 405 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 C11orf63Q6NUN7 778 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 ACOT1Q86TX2 421 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 LRRC8CQ8TDW0 803 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 NDRG1Q92597 394 aaKnown RBP8.93□□□□□ -0.98
RPAIN-215ENST00000575112 RILPQ96NA2 401 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 SMC6Q96SB8 1091 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 AFG3L2Q9Y4W6 797 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 ZNF541Q9H0D2 1346 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 CREB3O43889 395 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 CD48P09326 243 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 PDGFRAP16234 1089 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 AKAP5P24588 427 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 ABCG1P45844 678 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 USP4Q13107 963 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 SETDB1Q15047 1291 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 CYP1B1Q16678 543 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 SH3PXD2AQ5TCZ1 1133 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 DENND1BQ6P3S1 775 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 LRRC6Q86X45 466 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 SLC25A41Q8N5S1 370 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 FEZF2Q8TBJ5 459 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 SHC3Q92529 594 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 CDHR1Q96JP9 859 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 UNKQ9C0B0 810 aaKnown RBP8.93□□□□□ -0.98
RPAIN-215ENST00000575112 ACSS2Q9NR19 701 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 PCMTD2Q9NV79 361 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 DMAC2Q9NW81 257 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 SLC17A7Q9P2U7 560 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 FNDC3AQ9Y2H6 1198 aaKnown RBP8.93□□□□□ -0.98
RPAIN-215ENST00000575112 TIMM13Q9Y5L4 95 aaPredicted RBP8.93□□□□□ -0.98
RPAIN-215ENST00000575112 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.93□□□□□ -0.98
RPAIN-215ENST00000575112 GTPBP10A4D1E9 387 aaKnown RBP8.93□□□□□ -0.98
RPAIN-215ENST00000575112 NFKBIEO00221 500 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 USP1O94782 785 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 CTSHP09668 335 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 FDX1P10109 184 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 AMPD1P23109 780 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 LAMTOR4Q0VGL1 99 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 NME3Q13232 169 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 CAPSQ13938 189 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 GPR162Q16538 588 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 HADHQ16836 314 aaKnown RBP8.93□□□□□ -0.98
RPAIN-215ENST00000575112 SPDYCQ5MJ68 293 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 RNF43Q68DV7 783 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 SLC30A9Q6PML9 568 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 C3orf62Q6ZUJ4 267 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 CATSPER4Q7RTX7 472 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 MAP4K3Q8IVH8 894 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 SCUBE3Q8IX30 993 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 DCLK2Q8N568 766 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 JOSD2Q8TAC2 188 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 ACTL9Q8TC94 416 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 C10orf82Q8WW14 230 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 DNAJC9Q8WXX5 260 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 LENG1Q96BZ8 264 aaPredicted RBP8.93□□□□□ -0.98
RPAIN-215ENST00000575112 FAF2Q96CS3 445 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 MED10Q9BTT4 135 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 MRPL4Q9BYD3 311 aaKnown RBP8.93□□□□□ -0.98
RPAIN-215ENST00000575112 LRMDAQ9H2I8 198 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 DHX35Q9H5Z1 703 aaKnown RBP8.93□□□□□ -0.98
RPAIN-215ENST00000575112 SMYD2Q9NRG4 433 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 ANKEF1Q9NU02 776 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 EURLQ9NYK6 297 aa8.93□□□□□ -0.98
RPAIN-215ENST00000575112 PLIN4Q96Q06 1357 aa8.92□□□□□ -0.98
RPAIN-215ENST00000575112 SIGLEC16A6NMB1 481 aa8.92□□□□□ -0.98
RPAIN-215ENST00000575112 DYNC1LI2O43237 492 aaPredicted RBP8.92□□□□□ -0.98
RPAIN-215ENST00000575112 GRIN3BO60391 1043 aa8.92□□□□□ -0.98
RPAIN-215ENST00000575112 SNUPNO95149 360 aaKnown RBP8.92□□□□□ -0.98
RPAIN-215ENST00000575112 CYP1A1P04798 512 aaPredicted RBP8.92□□□□□ -0.98
RPAIN-215ENST00000575112 MAPTP10636 758 aaKnown RBP8.92□□□□□ -0.98
RPAIN-215ENST00000575112 RARBP10826 455 aa8.92□□□□□ -0.98
RPAIN-215ENST00000575112 PECAM1P16284 738 aaPredicted RBP8.92□□□□□ -0.98
RPAIN-215ENST00000575112 HSD17B4P51659 736 aa8.92□□□□□ -0.98
RPAIN-215ENST00000575112 SESN2P58004 480 aaPredicted RBP8.92□□□□□ -0.98
RPAIN-215ENST00000575112 OTUD4Q01804 1114 aaKnown RBP8.92□□□□□ -0.98
RPAIN-215ENST00000575112 ALCAMQ13740 583 aa8.92□□□□□ -0.98
RPAIN-215ENST00000575112 LRRC36Q1X8D7 754 aa8.92□□□□□ -0.98
RPAIN-215ENST00000575112 CTC1Q2NKJ3 1217 aa8.92□□□□□ -0.98
RPAIN-215ENST00000575112 MUM1Q2TAK8 710 aa8.92□□□□□ -0.98
RPAIN-215ENST00000575112 ATF7IP2Q5U623 682 aa8.92□□□□□ -0.98
RPAIN-215ENST00000575112 FAM83AQ86UY5 434 aa8.92□□□□□ -0.98
RPAIN-215ENST00000575112 GRK7Q8WTQ7 553 aa8.92□□□□□ -0.98
RPAIN-215ENST00000575112 SCG3Q8WXD2 468 aaKnown RBP8.92□□□□□ -0.98
RPAIN-215ENST00000575112 ASCC2Q9H1I8 757 aaPredicted RBP8.92□□□□□ -0.98
RPAIN-215ENST00000575112 LRRC19Q9H756 370 aa8.92□□□□□ -0.98
RPAIN-215ENST00000575112 SMYD3Q9H7B4 428 aa8.92□□□□□ -0.98
RPAIN-215ENST00000575112 BTBD7Q9P203 1132 aa8.92□□□□□ -0.98
RPAIN-215ENST00000575112 FIS1Q9Y3D6 152 aa8.92□□□□□ -0.98
RPAIN-215ENST00000575112 MROH7Q68CQ1 1323 aa8.92□□□□□ -0.98
RPAIN-215ENST00000575112 FAM47DPA6NHR8 397 aa8.92□□□□□ -0.98
RPAIN-215ENST00000575112 SPDYE16A6NNV3 312 aaPredicted RBP8.92□□□□□ -0.98
RPAIN-215ENST00000575112 E5RJQ4 531 aa8.92□□□□□ -0.98
RPAIN-215ENST00000575112 HCRTO43612 131 aa8.92□□□□□ -0.98
RPAIN-215ENST00000575112 RGS20O76081 388 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms