RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 IFNL1Q8IU54 200 aa14.77□□□□□ -0.04
VPS33B-208ENST00000574755 SOCS4Q8WXH5 440 aa14.77□□□□□ -0.04
VPS33B-208ENST00000574755 MIS12Q9H081 205 aa14.77□□□□□ -0.04
VPS33B-208ENST00000574755 DNAJC17Q9NVM6 304 aaKnown RBP14.77□□□□□ -0.04
VPS33B-208ENST00000574755 C17orf102A2RUQ5 167 aa14.77□□□□□ -0.05
VPS33B-208ENST00000574755 C3orf70A6NLC5 250 aaPredicted RBP14.77□□□□□ -0.05
VPS33B-208ENST00000574755 KLRC2P26717 231 aa14.77□□□□□ -0.05
VPS33B-208ENST00000574755 LSP1P33241 339 aa14.77□□□□□ -0.05
VPS33B-208ENST00000574755 PPP2R2AP63151 447 aa14.77□□□□□ -0.05
VPS33B-208ENST00000574755 DYNLT1P63172 113 aa14.77□□□□□ -0.05
VPS33B-208ENST00000574755 PLCB3Q01970 1234 aa14.77□□□□□ -0.05
VPS33B-208ENST00000574755 PPARDQ03181 441 aa14.77□□□□□ -0.05
VPS33B-208ENST00000574755 ACAP1Q15027 740 aa14.77□□□□□ -0.05
VPS33B-208ENST00000574755 FSCN1Q16658 493 aaKnown RBP14.77□□□□□ -0.05
VPS33B-208ENST00000574755 P3H1Q32P28 736 aa14.77□□□□□ -0.05
VPS33B-208ENST00000574755 IZUMO3Q5VZ72 239 aa14.77□□□□□ -0.05
VPS33B-208ENST00000574755 C9orf57Q5W0N0 161 aa14.77□□□□□ -0.05
VPS33B-208ENST00000574755 C7orf31Q8N865 590 aa14.77□□□□□ -0.05
VPS33B-208ENST00000574755 CCHCR1Q8TD31 782 aa14.77□□□□□ -0.05
VPS33B-208ENST00000574755 FAM49BQ9NUQ9 324 aa14.77□□□□□ -0.05
VPS33B-208ENST00000574755 KLK14Q9P0G3 267 aa14.77□□□□□ -0.05
VPS33B-208ENST00000574755 UBQLN1Q9UMX0 589 aaKnown RBP14.77□□□□□ -0.05
VPS33B-208ENST00000574755 Q9Y3F1 56 aa14.77□□□□□ -0.05
VPS33B-208ENST00000574755 ACSL3O95573 720 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 MIPP30301 263 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 RGS7P49802 495 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 RGMBQ6NW40 437 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 FAM183BPQ6ZVS7 135 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 CROCCP2Q86T23 111 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 OR6B3Q8NGW1 331 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 PGM2Q96G03 612 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 DDX23Q9BUQ8 820 aaKnown RBP14.76□□□□□ -0.05
VPS33B-208ENST00000574755 ASNSD1Q9NWL6 643 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 RGS16O15492 202 aaPredicted RBP14.76□□□□□ -0.05
VPS33B-208ENST00000574755 PFKMP08237 780 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 KDELR1P24390 212 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 ZNF143P52747 638 aaPredicted RBP14.76□□□□□ -0.05
VPS33B-208ENST00000574755 FBXO47Q5MNV8 452 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 SAPCD2Q86UD0 394 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 ALLCQ8N6M5 410 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 GLIS1Q8NBF1 620 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 KCTD6Q8NC69 237 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 EPS8L3Q8TE67 593 aaKnown RBP14.76□□□□□ -0.05
VPS33B-208ENST00000574755 HSPH1Q92598 858 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 TLCD1Q96CP7 247 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 PIWIL1Q96J94 861 aaKnown RBP14.76□□□□□ -0.05
VPS33B-208ENST00000574755 SLC12A6Q9UHW9 1150 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 GJD2Q9UKL4 321 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 USP18Q9UMW8 372 aa14.76□□□□□ -0.05
VPS33B-208ENST00000574755 SMIM28A0A1B0GU29 152 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 CST8O60676 142 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 GRAP2O75791 330 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 GNAT1P11488 350 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 PDGFRAP16234 1089 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 GPD1P21695 349 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 PSMC4P43686 418 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 SLCO1A2P46721 670 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 ARSEP51690 589 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 CRYBB1P53674 252 aaPredicted RBP14.75□□□□□ -0.05
VPS33B-208ENST00000574755 VCPP55072 806 aaKnown RBP14.75□□□□□ -0.05
VPS33B-208ENST00000574755 PURAQ00577 322 aaKnown RBP14.75□□□□□ -0.05
VPS33B-208ENST00000574755 SOWAHAQ2M3V2 549 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 C6orf118Q5T5N4 469 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 SESTD1Q86VW0 696 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 PWWP2AQ96N64 755 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 TMEM121Q9BTD3 319 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 ZFYVE28Q9HCC9 887 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 SAE1Q9UBE0 346 aaPredicted RBP14.75□□□□□ -0.05
VPS33B-208ENST00000574755 HESX1Q9UBX0 185 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 RSPH14Q9UHP6 348 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 DRG1Q9Y295 367 aaKnown RBP14.75□□□□□ -0.05
VPS33B-208ENST00000574755 EFR3BQ9Y2G0 817 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 NME7Q9Y5B8 376 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 A8MXQ7 604 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 SGK1O00141 431 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 TULP2O00295 520 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 RASGRF2O14827 1237 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 CD4P01730 458 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 CD48P09326 243 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 C6orf222P0C671 652 aaPredicted RBP14.75□□□□□ -0.05
VPS33B-208ENST00000574755 ZSCAN5DPP0CG00 497 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 AKR1A1P14550 325 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 OASLQ15646 514 aaKnown RBP14.75□□□□□ -0.05
VPS33B-208ENST00000574755 CHADLQ6NUI6 762 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 PMF1Q6P1K2 205 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 TTC30AQ86WT1 665 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 RXFP2Q8WXD0 754 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 NKD2Q969F2 451 aaPredicted RBP14.75□□□□□ -0.05
VPS33B-208ENST00000574755 CALN1Q9BXU9 219 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 RNF39Q9H2S5 420 aa14.75□□□□□ -0.05
VPS33B-208ENST00000574755 C2CD4BA6NLJ0 364 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 XPOTO43592 962 aaKnown RBP14.74□□□□□ -0.05
VPS33B-208ENST00000574755 TTC4O95801 387 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 ITGAVP06756 1048 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 ETS1P14921 441 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 TAF5Q15542 800 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 CDO1Q16878 200 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 SH3PXD2AQ5TCZ1 1133 aa14.74□□□□□ -0.05
VPS33B-208ENST00000574755 HIBCHQ6NVY1 386 aaPredicted RBP14.74□□□□□ -0.05
VPS33B-208ENST00000574755 UNC93AQ86WB7 457 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms