RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 CNOT1A5YKK6 2376 aaKnown RBP23.55■■□□□ 1.36
SNF8-216ENST00000573795 AXIN1O15169 862 aa23.55■■□□□ 1.36
SNF8-216ENST00000573795 ATG13O75143 517 aa23.55■■□□□ 1.36
SNF8-216ENST00000573795 EPN2O95208 641 aa23.55■■□□□ 1.36
SNF8-216ENST00000573795 DRD1P21728 446 aa23.55■■□□□ 1.36
SNF8-216ENST00000573795 MAGEA11P43364 429 aa23.55■■□□□ 1.36
SNF8-216ENST00000573795 PSMC1P62191 440 aaKnown RBP23.55■■□□□ 1.36
SNF8-216ENST00000573795 SF3A2Q15428 464 aaKnown RBP23.55■■□□□ 1.36
SNF8-216ENST00000573795 CCDC6Q16204 474 aa23.55■■□□□ 1.36
SNF8-216ENST00000573795 EML3Q32P44 896 aa23.55■■□□□ 1.36
SNF8-216ENST00000573795 SCN4BQ8IWT1 228 aa23.55■■□□□ 1.36
SNF8-216ENST00000573795 ARL14EPQ8N8R7 260 aaPredicted RBP23.55■■□□□ 1.36
SNF8-216ENST00000573795 MYLPFQ96A32 169 aa23.55■■□□□ 1.36
SNF8-216ENST00000573795 ANKRD36BP1Q96IX9 119 aa23.55■■□□□ 1.36
SNF8-216ENST00000573795 SYT15Q9BQS2 421 aa23.55■■□□□ 1.36
SNF8-216ENST00000573795 ARRDC1-AS1Q9H2J1 176 aa23.55■■□□□ 1.36
SNF8-216ENST00000573795 RXFP3Q9NSD7 469 aa23.55■■□□□ 1.36
SNF8-216ENST00000573795 DUS2Q9NX74 493 aaKnown RBP23.55■■□□□ 1.36
SNF8-216ENST00000573795 SLC8A2Q9UPR5 921 aa23.55■■□□□ 1.36
SNF8-216ENST00000573795 TRAV19A0A0A6YYK7 116 aa23.54■■□□□ 1.36
SNF8-216ENST00000573795 CKMP06732 381 aa23.54■■□□□ 1.36
SNF8-216ENST00000573795 USP17L7P0C7H9 530 aa23.54■■□□□ 1.36
SNF8-216ENST00000573795 NASPP49321 788 aaPredicted RBP23.54■■□□□ 1.36
SNF8-216ENST00000573795 ZXDBP98169 803 aa23.54■■□□□ 1.36
SNF8-216ENST00000573795 E2F4Q16254 413 aa23.54■■□□□ 1.36
SNF8-216ENST00000573795 DPH6Q7L8W6 267 aa23.54■■□□□ 1.36
SNF8-216ENST00000573795 CACNA2D4Q7Z3S7 1137 aa23.54■■□□□ 1.36
SNF8-216ENST00000573795 CCDC65Q8IXS2 484 aa23.54■■□□□ 1.36
SNF8-216ENST00000573795 CPA6Q8N4T0 437 aa23.54■■□□□ 1.36
SNF8-216ENST00000573795 HPDLQ96IR7 371 aa23.54■■□□□ 1.36
SNF8-216ENST00000573795 LOXL4Q96JB6 756 aa23.54■■□□□ 1.36
SNF8-216ENST00000573795 HHIPQ96QV1 700 aa23.54■■□□□ 1.36
SNF8-216ENST00000573795 NME7Q9Y5B8 376 aa23.54■■□□□ 1.36
SNF8-216ENST00000573795 MAP1BP46821 2468 aaKnown RBP23.54■■□□□ 1.36
SNF8-216ENST00000573795 KIAA0391O15091 583 aaKnown RBP23.53■■□□□ 1.36
SNF8-216ENST00000573795 TCF3P15923 654 aa23.53■■□□□ 1.36
SNF8-216ENST00000573795 USP46P62068 366 aa23.53■■□□□ 1.36
SNF8-216ENST00000573795 AMPD2Q01433 879 aa23.53■■□□□ 1.36
SNF8-216ENST00000573795 CAMKK1Q8N5S9 505 aa23.53■■□□□ 1.36
SNF8-216ENST00000573795 RPLP0P6Q8NHW5 317 aa23.53■■□□□ 1.36
SNF8-216ENST00000573795 SH3RF2Q8TEC5 729 aa23.53■■□□□ 1.36
SNF8-216ENST00000573795 HSPBP1Q9NZL4 362 aa23.53■■□□□ 1.36
SNF8-216ENST00000573795 CDH9Q9ULB4 789 aa23.53■■□□□ 1.36
SNF8-216ENST00000573795 ZNF233A6NK53 670 aa23.52■■□□□ 1.36
SNF8-216ENST00000573795 FOXD2O60548 495 aaPredicted RBP23.52■■□□□ 1.36
SNF8-216ENST00000573795 AKAP3O75969 853 aa23.52■■□□□ 1.36
SNF8-216ENST00000573795 WARSP23381 471 aaKnown RBP23.52■■□□□ 1.36
SNF8-216ENST00000573795 IFNAR2P48551 515 aa23.52■■□□□ 1.36
SNF8-216ENST00000573795 MYO1EQ12965 1108 aa23.52■■□□□ 1.36
SNF8-216ENST00000573795 FBXO43Q4G163 708 aa23.52■■□□□ 1.36
SNF8-216ENST00000573795 PLA2G2CQ5R387 149 aa23.52■■□□□ 1.36
SNF8-216ENST00000573795 C4orf50Q6ZRC1 276 aa23.52■■□□□ 1.36
SNF8-216ENST00000573795 EPM2AIP1Q7L775 607 aaPredicted RBP23.52■■□□□ 1.36
SNF8-216ENST00000573795 TTC16Q8NEE8 873 aa23.52■■□□□ 1.36
SNF8-216ENST00000573795 CD101Q93033 1021 aa23.52■■□□□ 1.36
SNF8-216ENST00000573795 ATP2A3Q93084 1043 aa23.52■■□□□ 1.36
SNF8-216ENST00000573795 ZC3H10Q96K80 434 aaKnown RBP23.52■■□□□ 1.36
SNF8-216ENST00000573795 SPATA17Q96L03 361 aa23.52■■□□□ 1.36
SNF8-216ENST00000573795 TRIM9Q9C026 710 aa23.52■■□□□ 1.36
SNF8-216ENST00000573795 TNMDQ9H2S6 317 aa23.52■■□□□ 1.36
SNF8-216ENST00000573795 LINC00597Q9H2U6 94 aa23.52■■□□□ 1.36
SNF8-216ENST00000573795 KBTBD4Q9NVX7 518 aa23.52■■□□□ 1.36
SNF8-216ENST00000573795 ARHGAP26Q9UNA1 814 aa23.52■■□□□ 1.36
SNF8-216ENST00000573795 TNNC2P02585 160 aa23.51■■□□□ 1.35
SNF8-216ENST00000573795 CENPBP07199 599 aaPredicted RBP23.51■■□□□ 1.35
SNF8-216ENST00000573795 ZNF806P0C7X5 589 aa23.51■■□□□ 1.35
SNF8-216ENST00000573795 CCDC192P0DO97 292 aa23.51■■□□□ 1.35
SNF8-216ENST00000573795 BDNFP23560 247 aa23.51■■□□□ 1.35
SNF8-216ENST00000573795 LIMK1P53667 647 aa23.51■■□□□ 1.35
SNF8-216ENST00000573795 DUOXA2Q1HG44 320 aa23.51■■□□□ 1.35
SNF8-216ENST00000573795 VSTM1Q6UX27 236 aa23.51■■□□□ 1.35
SNF8-216ENST00000573795 SYT13Q7L8C5 426 aa23.51■■□□□ 1.35
SNF8-216ENST00000573795 WDR49Q8IV35 697 aa23.51■■□□□ 1.35
SNF8-216ENST00000573795 LINC00301Q8NCQ3 95 aa23.51■■□□□ 1.35
SNF8-216ENST00000573795 INTS4Q96HW7 963 aaKnown RBP23.51■■□□□ 1.35
SNF8-216ENST00000573795 SMOC1Q9H4F8 434 aa23.51■■□□□ 1.35
SNF8-216ENST00000573795 MAGEC2Q9UBF1 373 aaPredicted RBP23.51■■□□□ 1.35
SNF8-216ENST00000573795 ZFHX4Q86UP3 3567 aa23.51■■□□□ 1.35
SNF8-216ENST00000573795 ANTXRLA6NF34 631 aa23.5■■□□□ 1.35
SNF8-216ENST00000573795 TM4SF5O14894 197 aa23.5■■□□□ 1.35
SNF8-216ENST00000573795 TGFB1I1O43294 461 aa23.5■■□□□ 1.35
SNF8-216ENST00000573795 PDGFRBP09619 1106 aa23.5■■□□□ 1.35
SNF8-216ENST00000573795 SURF1Q15526 300 aa23.5■■□□□ 1.35
SNF8-216ENST00000573795 GAB4Q2WGN9 574 aa23.5■■□□□ 1.35
SNF8-216ENST00000573795 PLK5Q496M5 336 aa23.5■■□□□ 1.35
SNF8-216ENST00000573795 AASDHQ4L235 1098 aaPredicted RBP23.5■■□□□ 1.35
SNF8-216ENST00000573795 TRAPPC11Q7Z392 1133 aa23.5■■□□□ 1.35
SNF8-216ENST00000573795 FSIP1Q8NA03 581 aa23.5■■□□□ 1.35
SNF8-216ENST00000573795 PCED1BQ96HM7 432 aa23.5■■□□□ 1.35
SNF8-216ENST00000573795 MRPL45Q9BRJ2 306 aaKnown RBP23.5■■□□□ 1.35
SNF8-216ENST00000573795 FOXD4L1Q9NU39 408 aa23.5■■□□□ 1.35
SNF8-216ENST00000573795 EIF3DO15371 548 aaKnown RBP eCLIP23.49■■□□□ 1.35
SNF8-216ENST00000573795 CST3P01034 146 aaPredicted RBP23.49■■□□□ 1.35
SNF8-216ENST00000573795 HDCP19113 662 aa23.49■■□□□ 1.35
SNF8-216ENST00000573795 DMC1Q14565 340 aa23.49■■□□□ 1.35
SNF8-216ENST00000573795 KCNB1Q14721 858 aa23.49■■□□□ 1.35
SNF8-216ENST00000573795 ZNF507Q8TCN5 953 aa23.49■■□□□ 1.35
SNF8-216ENST00000573795 TTLL2Q9BWV7 592 aa23.49■■□□□ 1.35
SNF8-216ENST00000573795 GZF1Q9H116 711 aaPredicted RBP23.49■■□□□ 1.35
SNF8-216ENST00000573795 DUSP15Q9H1R2 295 aaPredicted RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms