RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 GPR15P49685 360 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 NTHL1P78549 312 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 APBA1Q02410 837 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 ZP2Q05996 745 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 PRSS36Q5K4E3 855 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 KLHDC7AQ5VTJ3 777 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 GJB7Q6PEY0 223 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 TMEM270Q6UE05 265 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 TMC8Q8IU68 726 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 SCN4BQ8IWT1 228 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 SHC3Q92529 594 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 MYRFLQ96LU7 910 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 CORO1BQ9BR76 489 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 MED10Q9BTT4 135 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 RTN4Q9NQC3 1192 aaKnown RBP18.32■□□□□ 0.52
LITAF-212ENST00000573332 ASAH2Q9NR71 780 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 FAM49BQ9NUQ9 324 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 TMEM30AQ9NV96 361 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.32■□□□□ 0.52
LITAF-212ENST00000573332 DNAJC12Q9UKB3 198 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 SIK3Q9Y2K2 1263 aa18.32■□□□□ 0.52
LITAF-212ENST00000573332 LOC730098B7Z3J9 87 aa18.31■□□□□ 0.52
LITAF-212ENST00000573332 F8VP50 259 aa18.31■□□□□ 0.52
LITAF-212ENST00000573332 RNF225M0QZC1 329 aaPredicted RBP18.31■□□□□ 0.52
LITAF-212ENST00000573332 NOL4O94818 638 aa18.31■□□□□ 0.52
LITAF-212ENST00000573332 FGF19O95750 216 aa18.31■□□□□ 0.52
LITAF-212ENST00000573332 HMGA1P17096 107 aaKnown RBP18.31■□□□□ 0.52
LITAF-212ENST00000573332 CACNA2D1P54289 1103 aa18.31■□□□□ 0.52
LITAF-212ENST00000573332 UBXN1Q04323 297 aa18.31■□□□□ 0.52
LITAF-212ENST00000573332 PPP1R26Q5T8A7 1209 aaPredicted RBP18.31■□□□□ 0.52
LITAF-212ENST00000573332 CYP4A22Q5TCH4 519 aa18.31■□□□□ 0.52
LITAF-212ENST00000573332 PDZD4Q76G19 769 aaPredicted RBP18.31■□□□□ 0.52
LITAF-212ENST00000573332 OTOP3Q7RTS5 596 aa18.31■□□□□ 0.52
LITAF-212ENST00000573332 HS6ST3Q8IZP7 471 aa18.31■□□□□ 0.52
LITAF-212ENST00000573332 RBBP8NLQ8NC74 664 aaPredicted RBP18.31■□□□□ 0.52
LITAF-212ENST00000573332 GIPC2Q8TF65 315 aa18.31■□□□□ 0.52
LITAF-212ENST00000573332 TRMT2BQ96GJ1 504 aaKnown RBP18.31■□□□□ 0.52
LITAF-212ENST00000573332 NAA15Q9BXJ9 866 aaKnown RBP18.31■□□□□ 0.52
LITAF-212ENST00000573332 DMAP1Q9NPF5 467 aaPredicted RBP18.31■□□□□ 0.52
LITAF-212ENST00000573332 NR2E1Q9Y466 385 aa18.31■□□□□ 0.52
LITAF-212ENST00000573332 ZFP37Q9Y6Q3 630 aaPredicted RBP18.31■□□□□ 0.52
LITAF-212ENST00000573332 A0A1B0GTH6 734 aa18.3■□□□□ 0.52
LITAF-212ENST00000573332 SLC38A8A6NNN8 435 aa18.3■□□□□ 0.52
LITAF-212ENST00000573332 AP1G2O75843 785 aa18.3■□□□□ 0.52
LITAF-212ENST00000573332 FAM200BP0CF97 657 aa18.3■□□□□ 0.52
LITAF-212ENST00000573332 UCHL3P15374 230 aa18.3■□□□□ 0.52
LITAF-212ENST00000573332 ANXA13P27216 316 aa18.3■□□□□ 0.52
LITAF-212ENST00000573332 FILIP1LQ4L180 1135 aa18.3■□□□□ 0.52
LITAF-212ENST00000573332 SGO2Q562F6 1265 aa18.3■□□□□ 0.52
LITAF-212ENST00000573332 PLCD3Q8N3E9 789 aa18.3■□□□□ 0.52
LITAF-212ENST00000573332 ZMIZ2Q8NF64 920 aa18.3■□□□□ 0.52
LITAF-212ENST00000573332 SMOQ99835 787 aa18.3■□□□□ 0.52
LITAF-212ENST00000573332 LSM14BQ9BX40 385 aaKnown RBP18.3■□□□□ 0.52
LITAF-212ENST00000573332 GANQ9H2C0 597 aa18.3■□□□□ 0.52
LITAF-212ENST00000573332 ZNF334Q9HCZ1 680 aaPredicted RBP18.3■□□□□ 0.52
LITAF-212ENST00000573332 PNPLA8Q9NP80 782 aa18.3■□□□□ 0.52
LITAF-212ENST00000573332 KRT82Q9NSB4 513 aa18.3■□□□□ 0.52
LITAF-212ENST00000573332 EHD2Q9NZN4 543 aa18.3■□□□□ 0.52
LITAF-212ENST00000573332 MRPS23Q9Y3D9 190 aaKnown RBP18.3■□□□□ 0.52
LITAF-212ENST00000573332 MOSPD3O75425 235 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 ADORA2BP29275 332 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 CCR2P41597 374 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 SYCP1Q15431 976 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 STILQ15468 1287 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 CNGA2Q16280 664 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 TAF12Q16514 161 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 ARHGAP44Q17R89 818 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 SLC5A9Q2M3M2 681 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 SDHAF4Q5VUM1 108 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 CLEC20AQ6ZU45 233 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 DENND5BQ6ZUT9 1274 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 ZDHHC14Q8IZN3 488 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 ANKRD52Q8NB46 1076 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 ITFG1Q8TB96 612 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 GPR152Q8TDT2 470 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 ADAMTS19Q8TE59 1207 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 ACSF2Q96CM8 615 aaPredicted RBP18.29■□□□□ 0.52
LITAF-212ENST00000573332 KCNK16Q96T55 309 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 TTLL2Q9BWV7 592 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 DUSP16Q9BY84 665 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 UBXN6Q9BZV1 441 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 IL21Q9HBE4 155 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 COMMD8Q9NX08 183 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 IL37Q9NZH6 218 aa18.29■□□□□ 0.52
LITAF-212ENST00000573332 UXTQ9UBK9 157 aaPredicted RBP18.29■□□□□ 0.52
LITAF-212ENST00000573332 AJAP1Q9UKB5 411 aaPredicted RBP18.29■□□□□ 0.52
LITAF-212ENST00000573332 C2CD4DB7Z1M9 353 aa18.28■□□□□ 0.52
LITAF-212ENST00000573332 O00370 1275 aa18.28■□□□□ 0.52
LITAF-212ENST00000573332 TNFRSF10BO14763 440 aa18.28■□□□□ 0.52
LITAF-212ENST00000573332 F11P03951 625 aa18.28■□□□□ 0.52
LITAF-212ENST00000573332 MYL4P12829 197 aa18.28■□□□□ 0.52
LITAF-212ENST00000573332 CD19P15391 556 aa18.28■□□□□ 0.52
LITAF-212ENST00000573332 NPR3P17342 541 aa18.28■□□□□ 0.52
LITAF-212ENST00000573332 FANCCQ00597 558 aa18.28■□□□□ 0.52
LITAF-212ENST00000573332 MTMR3Q13615 1198 aa18.28■□□□□ 0.52
LITAF-212ENST00000573332 NR1I3Q14994 352 aa18.28■□□□□ 0.52
LITAF-212ENST00000573332 GAREM2Q75VX8 874 aa18.28■□□□□ 0.52
LITAF-212ENST00000573332 NUP93Q8N1F7 819 aa18.28■□□□□ 0.52
LITAF-212ENST00000573332 TDRD5Q8NAT2 981 aaKnown RBP18.28■□□□□ 0.52
LITAF-212ENST00000573332 TFAP2BQ92481 460 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms