RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 ASB16Q96NS5 453 aa12.65□□□□□ -0.38
NDE1-206ENST00000572967 LPIN3Q9BQK8 851 aa12.65□□□□□ -0.38
NDE1-206ENST00000572967 OXCT2Q9BYC2 517 aaPredicted RBP12.65□□□□□ -0.38
NDE1-206ENST00000572967 ZNF334Q9HCZ1 680 aaPredicted RBP12.65□□□□□ -0.38
NDE1-206ENST00000572967 RTN4Q9NQC3 1192 aaKnown RBP12.65□□□□□ -0.38
NDE1-206ENST00000572967 HEBP1Q9NRV9 189 aa12.65□□□□□ -0.38
NDE1-206ENST00000572967 GCNT4Q9P109 453 aa12.65□□□□□ -0.38
NDE1-206ENST00000572967 SLC27A5Q9Y2P5 690 aa12.65□□□□□ -0.38
NDE1-206ENST00000572967 SIT1Q9Y3P8 196 aa12.65□□□□□ -0.38
NDE1-206ENST00000572967 PTPRDP23468 1912 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 HELZP42694 1942 aaKnown RBP12.64□□□□□ -0.39
NDE1-206ENST00000572967 PRR23AA6NEV1 266 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 CYP11A1P05108 521 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 KRT19P08727 400 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 GLULP15104 373 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 TRIM21P19474 475 aaKnown RBP12.64□□□□□ -0.39
NDE1-206ENST00000572967 TARSP26639 723 aaKnown RBP12.64□□□□□ -0.39
NDE1-206ENST00000572967 NBL1P41271 181 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 ALDH1A3P47895 512 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 EPHB3P54753 998 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 EPHA5P54756 1037 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 STARD6P59095 220 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 SGSM1Q2NKQ1 1148 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 MGAT5BQ3V5L5 792 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 MIIPQ5JXC2 388 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 VITQ6UXI7 678 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.64□□□□□ -0.39
NDE1-206ENST00000572967 METTL23Q86XA0 190 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 TTC39CQ8N584 583 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 C1orf127Q8N9H9 656 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 STKLD1Q8NE28 680 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 ZSCAN18Q8TBC5 510 aaPredicted RBP12.64□□□□□ -0.39
NDE1-206ENST00000572967 PLEKHO2Q8TD55 490 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 ELSPBP1Q96BH3 223 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 SHDQ96IW2 340 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 NT5C1BQ96P26 610 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 ERGIC2Q96RQ1 377 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 NUP58Q9BVL2 599 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 XPO4Q9C0E2 1151 aaKnown RBP12.64□□□□□ -0.39
NDE1-206ENST00000572967 FAM124BQ9H5Z6 455 aaPredicted RBP12.64□□□□□ -0.39
NDE1-206ENST00000572967 ZFP14Q9HCL3 533 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 ABI2Q9NYB9 513 aaPredicted RBP12.64□□□□□ -0.39
NDE1-206ENST00000572967 DLGAP2Q9P1A6 1054 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 DSEQ9UL01 958 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 MAFFQ9ULX9 164 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 COQ4Q9Y3A0 265 aa12.64□□□□□ -0.39
NDE1-206ENST00000572967 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.64□□□□□ -0.39
NDE1-206ENST00000572967 KANSL1LA0AUZ9 987 aa12.63□□□□□ -0.39
NDE1-206ENST00000572967 STAU1O95793 577 aaKnown RBP12.63□□□□□ -0.39
NDE1-206ENST00000572967 ATF6P18850 670 aa12.63□□□□□ -0.39
NDE1-206ENST00000572967 TBXAS1P24557 533 aaPredicted RBP12.63□□□□□ -0.39
NDE1-206ENST00000572967 VIPR2P41587 438 aa12.63□□□□□ -0.39
NDE1-206ENST00000572967 YWHAEP62258 255 aaKnown RBP12.63□□□□□ -0.39
NDE1-206ENST00000572967 DLG4P78352 724 aa12.63□□□□□ -0.39
NDE1-206ENST00000572967 CYP4F8P98187 520 aa12.63□□□□□ -0.39
NDE1-206ENST00000572967 PRKCQQ04759 706 aa12.63□□□□□ -0.39
NDE1-206ENST00000572967 PPP3CAQ08209 521 aa12.63□□□□□ -0.39
NDE1-206ENST00000572967 ZNF699Q32M78 642 aa12.63□□□□□ -0.39
NDE1-206ENST00000572967 SLC44A4Q53GD3 710 aa12.63□□□□□ -0.39
NDE1-206ENST00000572967 TDRD10Q5VZ19 366 aaKnown RBP12.63□□□□□ -0.39
NDE1-206ENST00000572967 SCARA3Q6AZY7 606 aa12.63□□□□□ -0.39
NDE1-206ENST00000572967 ENOSF1Q7L5Y1 443 aa12.63□□□□□ -0.39
NDE1-206ENST00000572967 APTXQ7Z2E3 356 aaKnown RBP12.63□□□□□ -0.39
NDE1-206ENST00000572967 LEMD2Q8NC56 503 aa12.63□□□□□ -0.39
NDE1-206ENST00000572967 NEK11Q8NG66 645 aa12.63□□□□□ -0.39
NDE1-206ENST00000572967 LRRC3Q9BY71 257 aa12.63□□□□□ -0.39
NDE1-206ENST00000572967 INTS2Q9H0H0 1204 aaKnown RBP12.63□□□□□ -0.39
NDE1-206ENST00000572967 ZCWPW1Q9H0M4 648 aa12.63□□□□□ -0.39
NDE1-206ENST00000572967 BRD9Q9H8M2 597 aa12.63□□□□□ -0.39
NDE1-206ENST00000572967 LTB4R2Q9NPC1 389 aa12.63□□□□□ -0.39
NDE1-206ENST00000572967 RAB20Q9NX57 234 aa12.63□□□□□ -0.39
NDE1-206ENST00000572967 MTF2Q9Y483 593 aaPredicted RBP12.63□□□□□ -0.39
NDE1-206ENST00000572967 PTPRJQ12913 1337 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 ITIH6Q6UXX5 1313 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 KPNA7A9QM74 516 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 HLA-DRAP01903 254 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 C4BPAP04003 597 aaKnown RBP12.62□□□□□ -0.39
NDE1-206ENST00000572967 GABRR2P28476 465 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 CDC25BP30305 580 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 GDI1P31150 447 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 ZNF75DP51815 510 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 TNNC1P63316 161 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 NR1I3Q14994 352 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 VEPH1Q14D04 833 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 SYCP1Q15431 976 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 CCDC142Q17RM4 750 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 CBWD6Q4V339 395 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 CBWD3Q5JTY5 395 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 CBWD5Q5RIA9 395 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 C1orf220Q5T0J3 134 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 SPECC1LQ69YQ0 1117 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 GPIHBP1Q8IV16 184 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 THEM5Q8N1Q8 247 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 ZNF397Q8NF99 534 aaPredicted RBP12.62□□□□□ -0.39
NDE1-206ENST00000572967 OR5B17Q8NGF7 314 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 DNASE1L2Q92874 299 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 SMARCD2Q92925 531 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 NKD2Q969F2 451 aaPredicted RBP12.62□□□□□ -0.39
NDE1-206ENST00000572967 PSMG2Q969U7 264 aa12.62□□□□□ -0.39
NDE1-206ENST00000572967 DDX23Q9BUQ8 820 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms