RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 TACC1O75410 805 aa12.14□□□□□ -0.47
LITAF-206ENST00000571277 DLATP10515 647 aaKnown RBP12.14□□□□□ -0.47
LITAF-206ENST00000571277 ARSAP15289 507 aa12.14□□□□□ -0.47
LITAF-206ENST00000571277 FOXK2Q01167 660 aa12.14□□□□□ -0.47
LITAF-206ENST00000571277 RUNX3Q13761 415 aa12.14□□□□□ -0.47
LITAF-206ENST00000571277 KNOP1Q1ED39 458 aaKnown RBP12.14□□□□□ -0.47
LITAF-206ENST00000571277 TMEM196Q5HYL7 178 aa12.14□□□□□ -0.47
LITAF-206ENST00000571277 VSTM1Q6UX27 236 aa12.14□□□□□ -0.47
LITAF-206ENST00000571277 C4orf50Q6ZRC1 276 aa12.14□□□□□ -0.47
LITAF-206ENST00000571277 ERMP1Q7Z2K6 904 aa12.14□□□□□ -0.47
LITAF-206ENST00000571277 SCN4BQ8IWT1 228 aa12.14□□□□□ -0.47
LITAF-206ENST00000571277 MYLPFQ96A32 169 aa12.14□□□□□ -0.47
LITAF-206ENST00000571277 CCDC127Q96BQ5 260 aa12.14□□□□□ -0.47
LITAF-206ENST00000571277 PCED1BQ96HM7 432 aa12.14□□□□□ -0.47
LITAF-206ENST00000571277 SPATA17Q96L03 361 aa12.14□□□□□ -0.47
LITAF-206ENST00000571277 HINFPQ9BQA5 517 aa12.14□□□□□ -0.47
LITAF-206ENST00000571277 MRPL45Q9BRJ2 306 aaKnown RBP12.14□□□□□ -0.47
LITAF-206ENST00000571277 EBF3Q9H4W6 596 aa12.14□□□□□ -0.47
LITAF-206ENST00000571277 TMEM30AQ9NV96 361 aa12.14□□□□□ -0.47
LITAF-206ENST00000571277 GCNT4Q9P109 453 aa12.14□□□□□ -0.47
LITAF-206ENST00000571277 CGNQ9P2M7 1197 aaKnown RBP12.14□□□□□ -0.47
LITAF-206ENST00000571277 SERTAD1Q9UHV2 236 aa12.14□□□□□ -0.47
LITAF-206ENST00000571277 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.13□□□□□ -0.47
LITAF-206ENST00000571277 C2orf78A6NCI8 922 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 TRDMT1O14717 391 aaKnown RBP12.13□□□□□ -0.47
LITAF-206ENST00000571277 STAU1O95793 577 aaKnown RBP12.13□□□□□ -0.47
LITAF-206ENST00000571277 HSP90AA1P07900 732 aaKnown RBP12.13□□□□□ -0.47
LITAF-206ENST00000571277 PDGFRBP09619 1106 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 FAM163BP0C2L3 166 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 SLFN14P0C7P3 912 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 TNNI1P19237 187 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 BDNFP23560 247 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 HOXA6P31267 233 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 CASP4P49662 377 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 USP46P62068 366 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 CLDN10P78369 228 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 ZXDBP98169 803 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 FAM160A1Q05DH4 1040 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 STK4Q13043 487 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 USP4Q13107 963 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 PPP2R5DQ14738 602 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 MAPRE1Q15691 268 aaKnown RBP12.13□□□□□ -0.47
LITAF-206ENST00000571277 ZNF77Q15935 545 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 NAIF1Q69YI7 327 aaPredicted RBP12.13□□□□□ -0.47
LITAF-206ENST00000571277 FSTL4Q6MZW2 842 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 PKN3Q6P5Z2 889 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 HS2ST1Q7LGA3 356 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 SYNPOQ8N3V7 929 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 KIAA0895Q8NCT3 520 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 MYCBPAPQ8TBZ2 947 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 TMEM174Q8WUU8 243 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 CHAMP1Q96JM3 812 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 CEP295NLQ96MC4 621 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 FNBP1Q96RU3 617 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 MMS19Q96T76 1030 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 TTLL2Q9BWV7 592 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 FBRSL1Q9HCM7 1045 aaKnown RBP12.13□□□□□ -0.47
LITAF-206ENST00000571277 FAM13BQ9NYF5 915 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 DLL3Q9NYJ7 618 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 NCDNQ9UBB6 729 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 MAGEC2Q9UBF1 373 aaPredicted RBP12.13□□□□□ -0.47
LITAF-206ENST00000571277 CFAP45Q9UL16 551 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 ZDHHC9Q9Y397 364 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 R3HCC1Q9Y3T6 440 aaKnown RBP12.13□□□□□ -0.47
LITAF-206ENST00000571277 ATG2BQ96BY7 2078 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 NCOR2Q9Y618 2525 aa12.13□□□□□ -0.47
LITAF-206ENST00000571277 KIAA1549LQ6ZVL6 1849 aa12.12□□□□□ -0.47
LITAF-206ENST00000571277 CHURC1-FNTBB4DL54 471 aa12.12□□□□□ -0.47
LITAF-206ENST00000571277 HRO43593 1189 aa12.12□□□□□ -0.47
LITAF-206ENST00000571277 USP17L7P0C7H9 530 aa12.12□□□□□ -0.47
LITAF-206ENST00000571277 FNTBP49356 437 aa12.12□□□□□ -0.47
LITAF-206ENST00000571277 CACNA2D1P54289 1103 aa12.12□□□□□ -0.47
LITAF-206ENST00000571277 MYL6P60660 151 aa12.12□□□□□ -0.47
LITAF-206ENST00000571277 MTF1Q14872 753 aa12.12□□□□□ -0.47
LITAF-206ENST00000571277 WDR72Q3MJ13 1102 aa12.12□□□□□ -0.47
LITAF-206ENST00000571277 ARL14EPQ8N8R7 260 aaPredicted RBP12.12□□□□□ -0.47
LITAF-206ENST00000571277 SPRYD3Q8NCJ5 442 aa12.12□□□□□ -0.47
LITAF-206ENST00000571277 PARD3BQ8TEW8 1205 aa12.12□□□□□ -0.47
LITAF-206ENST00000571277 PAGE5Q96GU1 130 aa12.12□□□□□ -0.47
LITAF-206ENST00000571277 KCTD10Q9H3F6 313 aa12.12□□□□□ -0.47
LITAF-206ENST00000571277 VRTNQ9H8Y1 702 aa12.12□□□□□ -0.47
LITAF-206ENST00000571277 TRPC7Q9HCX4 862 aa12.12□□□□□ -0.47
LITAF-206ENST00000571277 PARD6AQ9NPB6 346 aa12.12□□□□□ -0.47
LITAF-206ENST00000571277 DMAC2Q9NW81 257 aa12.12□□□□□ -0.47
LITAF-206ENST00000571277 HPSEQ9Y251 543 aa12.12□□□□□ -0.47
LITAF-206ENST00000571277 MYO16Q9Y6X6 1858 aa12.12□□□□□ -0.47
LITAF-206ENST00000571277 TRAV19A0A0A6YYK7 116 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 F8VP50 259 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 VNN1O95497 513 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 CKMP06732 381 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 TCF3P15923 654 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 PFKFB1P16118 471 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 PTPN1P18031 435 aaKnown RBP12.11□□□□□ -0.47
LITAF-206ENST00000571277 CMA1P23946 247 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 ATICP31939 592 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 GNL1P36915 607 aaPredicted RBP12.11□□□□□ -0.47
LITAF-206ENST00000571277 NOP14P78316 857 aaKnown RBP12.11□□□□□ -0.47
LITAF-206ENST00000571277 CYP27A1Q02318 531 aa12.11□□□□□ -0.47
LITAF-206ENST00000571277 SRSF5Q13243 272 aaKnown RBP12.11□□□□□ -0.47
LITAF-206ENST00000571277 PDGFRLQ15198 375 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms