RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 JOSD2Q8TAC2 188 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 ZNF526Q8TF50 670 aaPredicted RBP18.3■□□□□ 0.52
SCARF1-205ENST00000571272 MCUR1Q96AQ8 359 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 NSL1Q96IY1 281 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 SERAC1Q96JX3 654 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 DHRS4Q9BTZ2 278 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 MTMR12Q9C0I1 747 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 KCNK13Q9HB14 408 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 CISHQ9NSE2 258 aa18.3■□□□□ 0.52
SCARF1-205ENST00000571272 NVLO15381 856 aaKnown RBP18.29■□□□□ 0.52
SCARF1-205ENST00000571272 IRX1P78414 480 aaPredicted RBP18.29■□□□□ 0.52
SCARF1-205ENST00000571272 SPDYAQ5MJ70 313 aa18.29■□□□□ 0.52
SCARF1-205ENST00000571272 PPP1R15BQ5SWA1 713 aa18.29■□□□□ 0.52
SCARF1-205ENST00000571272 PPP1R2P3Q6NXS1 205 aa18.29■□□□□ 0.52
SCARF1-205ENST00000571272 RINLQ6ZS11 566 aa18.29■□□□□ 0.52
SCARF1-205ENST00000571272 KRT27Q7Z3Y8 459 aa18.29■□□□□ 0.52
SCARF1-205ENST00000571272 ZBTB33Q86T24 672 aa18.29■□□□□ 0.52
SCARF1-205ENST00000571272 KIAA0319LQ8IZA0 1049 aa18.29■□□□□ 0.52
SCARF1-205ENST00000571272 ARFGAP1Q8N6T3 406 aa18.29■□□□□ 0.52
SCARF1-205ENST00000571272 EMC1Q8N766 993 aa18.29■□□□□ 0.52
SCARF1-205ENST00000571272 PTCD3Q96EY7 689 aaKnown RBP18.29■□□□□ 0.52
SCARF1-205ENST00000571272 ARMCX1Q9P291 453 aa18.29■□□□□ 0.52
SCARF1-205ENST00000571272 STOML1Q9UBI4 398 aa18.29■□□□□ 0.52
SCARF1-205ENST00000571272 A0A0B4J269 797 aa18.29■□□□□ 0.52
SCARF1-205ENST00000571272 PTPN7P35236 360 aa18.29■□□□□ 0.52
SCARF1-205ENST00000571272 SNX30Q5VWJ9 437 aa18.29■□□□□ 0.52
SCARF1-205ENST00000571272 SLFN12LQ6IEE8 588 aa18.29■□□□□ 0.52
SCARF1-205ENST00000571272 ABHD15Q6UXT9 468 aa18.29■□□□□ 0.52
SCARF1-205ENST00000571272 KIAA1217Q5T5P2 1943 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 LRCH4O75427 683 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 STAM2O75886 525 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 ELK3P41970 407 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 CPA2P48052 419 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 ERFP50548 548 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 FAAP100Q0VG06 881 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 PTK7Q13308 1070 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 XKR3Q5GH77 459 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 TMEM154Q6P9G4 183 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 WDR60Q8WVS4 1066 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 TCHPQ9BT92 498 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 ZNF277Q9NRM2 450 aaPredicted RBP18.28■□□□□ 0.52
SCARF1-205ENST00000571272 IKBKGQ9Y6K9 419 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 VWA5AO00534 786 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 MAP3K13O43283 966 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 ITGBL1O95965 494 aaPredicted RBP18.28■□□□□ 0.52
SCARF1-205ENST00000571272 LDHAP00338 332 aaKnown RBP18.28■□□□□ 0.52
SCARF1-205ENST00000571272 ASS1P00966 412 aaKnown RBP18.28■□□□□ 0.52
SCARF1-205ENST00000571272 PYGBP11216 843 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 ACADSP16219 412 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 KLC1Q07866 573 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 TAF5Q15542 800 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 KBTBD12Q3ZCT8 623 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 UCMAQ8WVF2 138 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 NRG4Q8WWG1 115 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 TAS2R1Q9NYW7 299 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 PGAP2Q9UHJ9 254 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 CAPN9O14815 690 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 LMNAP02545 664 aaKnown RBP18.28■□□□□ 0.52
SCARF1-205ENST00000571272 ESRRAP11474 423 aaPredicted RBP18.28■□□□□ 0.52
SCARF1-205ENST00000571272 MXRA7P84157 204 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 SLC25A11Q02978 314 aaKnown RBP18.28■□□□□ 0.52
SCARF1-205ENST00000571272 THEMIS2Q5TEJ8 643 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 ALKBH8Q96BT7 664 aaKnown RBP18.28■□□□□ 0.52
SCARF1-205ENST00000571272 ZNF333Q96JL9 665 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 FETUBQ9UGM5 382 aa18.28■□□□□ 0.52
SCARF1-205ENST00000571272 FAM237BA0A1B0GVD1 139 aa18.27■□□□□ 0.52
SCARF1-205ENST00000571272 HNRNPCL1O60812 293 aaKnown RBP18.27■□□□□ 0.52
SCARF1-205ENST00000571272 AVILO75366 819 aa18.27■□□□□ 0.52
SCARF1-205ENST00000571272 MYL2P10916 166 aa18.27■□□□□ 0.52
SCARF1-205ENST00000571272 KRT3P12035 628 aa18.27■□□□□ 0.52
SCARF1-205ENST00000571272 KDELR1P24390 212 aa18.27■□□□□ 0.52
SCARF1-205ENST00000571272 VHLP40337 213 aa18.27■□□□□ 0.52
SCARF1-205ENST00000571272 HIRAP54198 1017 aaPredicted RBP18.27■□□□□ 0.52
SCARF1-205ENST00000571272 YWHAGP61981 247 aaKnown RBP eCLIP18.27■□□□□ 0.52
SCARF1-205ENST00000571272 MRPS35P82673 323 aaKnown RBP18.27■□□□□ 0.52
SCARF1-205ENST00000571272 CDK16Q00536 496 aa18.27■□□□□ 0.52
SCARF1-205ENST00000571272 CIAPIN1Q6FI81 312 aa18.27■□□□□ 0.52
SCARF1-205ENST00000571272 DENND1BQ6P3S1 775 aa18.27■□□□□ 0.52
SCARF1-205ENST00000571272 FAM83AQ86UY5 434 aa18.27■□□□□ 0.52
SCARF1-205ENST00000571272 RFX6Q8HWS3 928 aa18.27■□□□□ 0.52
SCARF1-205ENST00000571272 UBR7Q8N806 425 aa18.27■□□□□ 0.52
SCARF1-205ENST00000571272 SPDYE1Q8NFV5 336 aaPredicted RBP18.27■□□□□ 0.52
SCARF1-205ENST00000571272 CYTH2Q99418 400 aa18.27■□□□□ 0.52
SCARF1-205ENST00000571272 PORCNQ9H237 461 aa18.27■□□□□ 0.52
SCARF1-205ENST00000571272 RPL26L1Q9UNX3 145 aaKnown RBP18.27■□□□□ 0.52
SCARF1-205ENST00000571272 TCRBV9S1A1TA0A576 114 aa18.27■□□□□ 0.51
SCARF1-205ENST00000571272 E7ESA3 106 aa18.27■□□□□ 0.51
SCARF1-205ENST00000571272 NDC80O14777 642 aa18.27■□□□□ 0.51
SCARF1-205ENST00000571272 FAM155BO75949 473 aa18.27■□□□□ 0.51
SCARF1-205ENST00000571272 LSM8O95777 96 aaKnown RBP18.27■□□□□ 0.51
SCARF1-205ENST00000571272 DLDP09622 509 aaKnown RBP18.27■□□□□ 0.51
SCARF1-205ENST00000571272 CD19P15391 556 aa18.27■□□□□ 0.51
SCARF1-205ENST00000571272 EIF3EP60228 445 aaKnown RBP18.27■□□□□ 0.51
SCARF1-205ENST00000571272 TGFB2P61812 414 aa18.27■□□□□ 0.51
SCARF1-205ENST00000571272 PTPN20Q4JDL3 420 aa18.27■□□□□ 0.51
SCARF1-205ENST00000571272 SH3TC2Q8TF17 1288 aa18.27■□□□□ 0.51
SCARF1-205ENST00000571272 SCG3Q8WXD2 468 aaKnown RBP18.27■□□□□ 0.51
SCARF1-205ENST00000571272 HSPH1Q92598 858 aa18.27■□□□□ 0.51
SCARF1-205ENST00000571272 SKA1Q96BD8 255 aa18.27■□□□□ 0.51
SCARF1-205ENST00000571272 DLGAP2Q9P1A6 1054 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms