RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 DEPDC1BQ8WUY9 529 aa14.25□□□□□ -0.13
CCDC40-205ENST00000571028 MSANTD3Q96H12 275 aa14.25□□□□□ -0.13
CCDC40-205ENST00000571028 HPDLQ96IR7 371 aa14.25□□□□□ -0.13
CCDC40-205ENST00000571028 CNOT6LQ96LI5 555 aaKnown RBP14.25□□□□□ -0.13
CCDC40-205ENST00000571028 ZNF560Q96MR9 790 aa14.25□□□□□ -0.13
CCDC40-205ENST00000571028 METTL14Q9HCE5 456 aaKnown RBP14.25□□□□□ -0.13
CCDC40-205ENST00000571028 TRPV5Q9NQA5 729 aa14.25□□□□□ -0.13
CCDC40-205ENST00000571028 SAMSN1Q9NSI8 373 aaKnown RBP14.25□□□□□ -0.13
CCDC40-205ENST00000571028 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.25□□□□□ -0.13
CCDC40-205ENST00000571028 KPNA7A9QM74 516 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 CYB561D2O14569 222 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 AXIN1O15169 862 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 STX10O60499 249 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 C4BPAP04003 597 aaKnown RBP14.24□□□□□ -0.13
CCDC40-205ENST00000571028 CHRNB1P11230 501 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 KPNA1P52294 538 aaPredicted RBP14.24□□□□□ -0.13
CCDC40-205ENST00000571028 AP3M2P53677 418 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 ARPP19P56211 112 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 MYO1EQ12965 1108 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 SV2CQ496J9 727 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 IQCEQ6IPM2 695 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 AOPEPQ8N6M6 819 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 SMARCD2Q92925 531 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 SUSD3Q96L08 255 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 SENP8Q96LD8 212 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 ASB16Q96NS5 453 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 PI4K2AQ9BTU6 479 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 NAT10Q9H0A0 1025 aaKnown RBP14.24□□□□□ -0.13
CCDC40-205ENST00000571028 ARRDC1-AS1Q9H2J1 176 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 SLITRK6Q9H5Y7 841 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 NXF1Q9UBU9 619 aaKnown RBP14.24□□□□□ -0.13
CCDC40-205ENST00000571028 NFE2L3Q9Y4A8 694 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 SNX9Q9Y5X1 595 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 BACE2Q9Y5Z0 518 aa14.24□□□□□ -0.13
CCDC40-205ENST00000571028 WDR27A2RRH5 827 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 IKBKBO14920 756 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 VNN1O95497 513 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 GNA14O95837 355 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 HLA-DRAP01903 254 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 FGFR3P22607 806 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 PNPLA4P41247 253 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 CDR1P51861 262 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 NCOA4Q13772 614 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 CCDC6Q16204 474 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 CT47A1Q5JQC4 288 aaPredicted RBP14.23□□□□□ -0.13
CCDC40-205ENST00000571028 STPG1Q5TH74 334 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 FOXR2Q6PJQ5 311 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 VITQ6UXI7 678 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 UNQ6494/PRO21346Q6UXR6 183 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 FAM114A1Q8IWE2 563 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 LRRC52Q8N7C0 313 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 CXorf38Q8TB03 319 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 ENOX1Q8TC92 643 aaKnown RBP14.23□□□□□ -0.13
CCDC40-205ENST00000571028 TCEAL4Q96EI5 215 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 MMS19Q96T76 1030 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 THAP9Q9H5L6 903 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 CYP4F11Q9HBI6 524 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 ZMIZ1Q9ULJ6 1067 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 PCDHB8Q9UN66 801 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.23□□□□□ -0.13
CCDC40-205ENST00000571028 ANK1P16157 1881 aa14.23□□□□□ -0.13
CCDC40-205ENST00000571028 FAM208BQ5VWN6 2430 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 ARHGEF37A1IGU5 675 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 KCNJ18B7U540 433 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 PES1O00541 588 aaKnown RBP14.22□□□□□ -0.13
CCDC40-205ENST00000571028 HUS1O60921 280 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 MICAL2O94851 1124 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 KCNK5O95279 499 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 PAPSS2O95340 614 aaPredicted RBP14.22□□□□□ -0.13
CCDC40-205ENST00000571028 ZNF806P0C7X5 589 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 ODC1P11926 461 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 MXI1P50539 228 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 CLDN10P78369 228 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 MYL5Q02045 173 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 KCNJ12Q14500 433 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 ZNF699Q32M78 642 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 WDR72Q3MJ13 1102 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 ZACNQ401N2 412 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 CTXN3Q4LDR2 81 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 CBWD6Q4V339 395 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 CBWD3Q5JTY5 395 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 PRSS36Q5K4E3 855 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 DGKKQ5KSL6 1271 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 CBWD5Q5RIA9 395 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 WSCD1Q658N2 575 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 KRT39Q6A163 491 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 SPOPLQ6IQ16 392 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 PSAPL1Q6NUJ1 521 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 SCARA5Q6ZMJ2 495 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 IRF2BP1Q8IU81 584 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 ZNF461Q8TAF7 563 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 TAS1R2Q8TE23 839 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 SLC35C1Q96A29 364 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 LOXL4Q96JB6 756 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 FUCA2Q9BTY2 467 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 C8orf33Q9H7E9 229 aaPredicted RBP14.22□□□□□ -0.13
CCDC40-205ENST00000571028 TMEM8AQ9HCN3 771 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 RBM12Q9NTZ6 932 aaKnown RBP14.22□□□□□ -0.13
CCDC40-205ENST00000571028 FANCLQ9NW38 375 aa14.22□□□□□ -0.13
CCDC40-205ENST00000571028 PDCD11Q14690 1871 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms