RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 IFNAR2P48551 515 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 LHX1P48742 406 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 USP46P62068 366 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 CYP27A1Q02318 531 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 FAM160A1Q05DH4 1040 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 PDGFRLQ15198 375 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 STK38Q15208 465 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 FOXD4L6Q3SYB3 417 aaPredicted RBP9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 AASDHQ4L235 1098 aaPredicted RBP9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 FOXD4L3Q6VB84 417 aaPredicted RBP9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 CCDC65Q8IXS2 484 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 TMEM86AQ8N2M4 240 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 CPA6Q8N4T0 437 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 TOP6BLQ8N6T0 577 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 RPLP0P6Q8NHW5 317 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 SH3RF2Q8TEC5 729 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 LEO1Q8WVC0 666 aaPredicted RBP9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 KBTBD7Q8WVZ9 684 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 GAB3Q8WWW8 586 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 EZH1Q92800 747 aaPredicted RBP9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 MYLPFQ96A32 169 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 DHX58Q96C10 678 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 MYRFLQ96LU7 910 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 MMS19Q96T76 1030 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 TMEM206Q9H813 350 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 KIF9Q9HAQ2 790 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 ABCB6Q9NP58 842 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 CRTAC1Q9NQ79 661 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 UXTQ9UBK9 157 aaPredicted RBP9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 ZMYM5Q9UJ78 669 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 INVSQ9Y283 1065 aa9.22□□□□□ -0.93
CTDNEP1-203ENST00000570385 ANAPC1Q9H1A4 1944 aa9.21□□□□□ -0.93
CTDNEP1-203ENST00000570385 MYOFQ9NZM1 2061 aa9.21□□□□□ -0.93
CTDNEP1-203ENST00000570385 CLIC2O15247 247 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 LRP3O75074 770 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 ATG13O75143 517 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 KRT37O76014 449 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 ABL1P00519 1130 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 CST3P01034 146 aaPredicted RBP9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 USP17L7P0C7H9 530 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 DLATP10515 647 aaKnown RBP9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 HDCP19113 662 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 CASP1P29466 404 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 HOXA6P31267 233 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 CYP2J2P51589 502 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 SEC13P55735 322 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 ASIC1P78348 528 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 ZXDBP98169 803 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 IFRD2Q12894 506 aaPredicted RBP9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 MYO1EQ12965 1108 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 ALCAMQ13740 583 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 ZNF268Q14587 947 aaPredicted RBP9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 KCNB1Q14721 858 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 ZNF77Q15935 545 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 DUOXA2Q1HG44 320 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 EML3Q32P44 896 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 TCEAL6Q6IPX3 200 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 FAM171BQ6P995 826 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 HS2ST1Q7LGA3 356 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 CACNA2D4Q7Z3S7 1137 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 NELFCDQ8IXH7 590 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 C12orf50Q8NA57 414 aaPredicted RBP9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 OSCP1Q8WVF1 389 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 CD101Q93033 1021 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 TCEAL3Q969E4 200 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 ELMO3Q96BJ8 720 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 CCDC127Q96BQ5 260 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 TRMT2BQ96GJ1 504 aaKnown RBP9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 PCED1BQ96HM7 432 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 MRPL45Q9BRJ2 306 aaKnown RBP9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 SMPD4Q9NXE4 827 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 HSPBP1Q9NZL4 362 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 GCNT4Q9P109 453 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 MAGEC2Q9UBF1 373 aaPredicted RBP9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 NME7Q9Y5B8 376 aa9.21□□□□□ -0.94
CTDNEP1-203ENST00000570385 STX6O43752 255 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 ADRB1P08588 477 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 TNNI1P19237 187 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 DRD1P21728 446 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 NASPP49321 788 aaPredicted RBP9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 AMPD2Q01433 879 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 USP4Q13107 963 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 DMC1Q14565 340 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 CFAP221Q4G0U5 840 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 C2orf27AQ580R0 203 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 MDH1BQ5I0G3 518 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 IL31Q6EBC2 164 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 C4orf50Q6ZRC1 276 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 TRAPPC11Q7Z392 1133 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 TTC30AQ86WT1 665 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 CCDC33Q8N5R6 958 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 FSIP1Q8NA03 581 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 LINC00301Q8NCQ3 95 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 OR6B3Q8NGW1 331 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 TRIM9Q9C026 710 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 RNF38Q9H0F5 515 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 BLZF1Q9H2G9 400 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 SNX25Q9H3E2 840 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 DPEP3Q9H4B8 488 aa9.2□□□□□ -0.94
CTDNEP1-203ENST00000570385 CDH9Q9ULB4 789 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms