RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 GPD1LQ8N335 351 aa22.57■■□□□ 1.2
PKD1-240ENST00000570253 CEP295NLQ96MC4 621 aa22.57■■□□□ 1.2
PKD1-240ENST00000570253 CLIC4Q9Y696 253 aa22.57■■□□□ 1.2
PKD1-240ENST00000570253 WNT6Q9Y6F9 365 aa22.57■■□□□ 1.2
PKD1-240ENST00000570253 TADA3O75528 432 aa22.56■■□□□ 1.2
PKD1-240ENST00000570253 PFKLP17858 780 aa22.56■■□□□ 1.2
PKD1-240ENST00000570253 HDCP19113 662 aa22.56■■□□□ 1.2
PKD1-240ENST00000570253 GBP1P32455 592 aa22.56■■□□□ 1.2
PKD1-240ENST00000570253 PLK5Q496M5 336 aa22.56■■□□□ 1.2
PKD1-240ENST00000570253 VSTM1Q6UX27 236 aa22.56■■□□□ 1.2
PKD1-240ENST00000570253 USP49Q70CQ1 688 aa22.56■■□□□ 1.2
PKD1-240ENST00000570253 CCDC65Q8IXS2 484 aa22.56■■□□□ 1.2
PKD1-240ENST00000570253 TSTD1Q8NFU3 115 aa22.56■■□□□ 1.2
PKD1-240ENST00000570253 SH3RF2Q8TEC5 729 aa22.56■■□□□ 1.2
PKD1-240ENST00000570253 DNAJC19Q96DA6 116 aa22.56■■□□□ 1.2
PKD1-240ENST00000570253 SYT15Q9BQS2 421 aa22.56■■□□□ 1.2
PKD1-240ENST00000570253 MTMR12Q9C0I1 747 aa22.56■■□□□ 1.2
PKD1-240ENST00000570253 LRRC27Q9C0I9 530 aa22.56■■□□□ 1.2
PKD1-240ENST00000570253 PCIF1Q9H4Z3 704 aa22.56■■□□□ 1.2
PKD1-240ENST00000570253 PDE11AQ9HCR9 933 aa22.56■■□□□ 1.2
PKD1-240ENST00000570253 PANK4Q9NVE7 773 aa22.56■■□□□ 1.2
PKD1-240ENST00000570253 CDH9Q9ULB4 789 aa22.56■■□□□ 1.2
PKD1-240ENST00000570253 HOXC13P31276 330 aa22.55■■□□□ 1.2
PKD1-240ENST00000570253 GRIK1P39086 918 aa22.55■■□□□ 1.2
PKD1-240ENST00000570253 DGKEP52429 567 aa22.55■■□□□ 1.2
PKD1-240ENST00000570253 CREB5Q02930 508 aa22.55■■□□□ 1.2
PKD1-240ENST00000570253 EML3Q32P44 896 aa22.55■■□□□ 1.2
PKD1-240ENST00000570253 USP39Q53GS9 565 aaKnown RBP22.55■■□□□ 1.2
PKD1-240ENST00000570253 PLA2G2CQ5R387 149 aa22.55■■□□□ 1.2
PKD1-240ENST00000570253 ARL14EPQ8N8R7 260 aaPredicted RBP22.55■■□□□ 1.2
PKD1-240ENST00000570253 CYP2S1Q96SQ9 504 aa22.55■■□□□ 1.2
PKD1-240ENST00000570253 CBWD1Q9BRT8 395 aa22.55■■□□□ 1.2
PKD1-240ENST00000570253 TRPM5Q9NZQ8 1165 aa22.55■■□□□ 1.2
PKD1-240ENST00000570253 EBF1Q9UH73 591 aa22.55■■□□□ 1.2
PKD1-240ENST00000570253 FBXO2Q9UK22 296 aaPredicted RBP22.55■■□□□ 1.2
PKD1-240ENST00000570253 CNOT1A5YKK6 2376 aaKnown RBP22.54■■□□□ 1.2
PKD1-240ENST00000570253 ZNF233A6NK53 670 aa22.54■■□□□ 1.2
PKD1-240ENST00000570253 GABRDO14764 452 aa22.54■■□□□ 1.2
PKD1-240ENST00000570253 TCF3P15923 654 aa22.54■■□□□ 1.2
PKD1-240ENST00000570253 OSTM1Q86WC4 334 aa22.54■■□□□ 1.2
PKD1-240ENST00000570253 RIN3Q8TB24 985 aa22.54■■□□□ 1.2
PKD1-240ENST00000570253 HPDLQ96IR7 371 aa22.54■■□□□ 1.2
PKD1-240ENST00000570253 SPATA17Q96L03 361 aa22.54■■□□□ 1.2
PKD1-240ENST00000570253 PKMYT1Q99640 499 aa22.54■■□□□ 1.2
PKD1-240ENST00000570253 FBRSL1Q9HCM7 1045 aaKnown RBP22.54■■□□□ 1.2
PKD1-240ENST00000570253 ARHGAP26Q9UNA1 814 aa22.54■■□□□ 1.2
PKD1-240ENST00000570253 TRIM66O15016 1216 aa22.53■■□□□ 1.2
PKD1-240ENST00000570253 PRPF6O94906 941 aaKnown RBP22.53■■□□□ 1.2
PKD1-240ENST00000570253 PPP3CCP48454 512 aa22.53■■□□□ 1.2
PKD1-240ENST00000570253 WNT7BP56706 349 aa22.53■■□□□ 1.2
PKD1-240ENST00000570253 CYP27A1Q02318 531 aa22.53■■□□□ 1.2
PKD1-240ENST00000570253 CEBPZQ03701 1054 aaKnown RBP22.53■■□□□ 1.2
PKD1-240ENST00000570253 DUOXA2Q1HG44 320 aa22.53■■□□□ 1.2
PKD1-240ENST00000570253 SOWAHAQ2M3V2 549 aa22.53■■□□□ 1.2
PKD1-240ENST00000570253 N4BP2L1Q5TBK1 243 aaPredicted RBP22.53■■□□□ 1.2
PKD1-240ENST00000570253 DAB2IPQ5VWQ8 1189 aa22.53■■□□□ 1.2
PKD1-240ENST00000570253 DENND5BQ6ZUT9 1274 aa22.53■■□□□ 1.2
PKD1-240ENST00000570253 CLIC6Q96NY7 704 aa22.53■■□□□ 1.2
PKD1-240ENST00000570253 MMS19Q96T76 1030 aa22.53■■□□□ 1.2
PKD1-240ENST00000570253 EDEM2Q9BV94 578 aa22.53■■□□□ 1.2
PKD1-240ENST00000570253 DUSP15Q9H1R2 295 aaPredicted RBP22.53■■□□□ 1.2
PKD1-240ENST00000570253 KIAA1586Q9HCI6 787 aa22.53■■□□□ 1.2
PKD1-240ENST00000570253 INTS13Q9NVM9 706 aa22.53■■□□□ 1.2
PKD1-240ENST00000570253 KMT2BQ9UMN6 2715 aaPredicted RBP22.52■■□□□ 1.2
PKD1-240ENST00000570253 C2orf78A6NCI8 922 aa22.52■■□□□ 1.2
PKD1-240ENST00000570253 ALDH1A2O94788 518 aa22.52■■□□□ 1.2
PKD1-240ENST00000570253 CAVIN2O95810 425 aa22.52■■□□□ 1.2
PKD1-240ENST00000570253 CASP5P51878 434 aa22.52■■□□□ 1.2
PKD1-240ENST00000570253 FAM171BQ6P995 826 aa22.52■■□□□ 1.2
PKD1-240ENST00000570253 ZSWIM2Q8NEG5 633 aa22.52■■□□□ 1.2
PKD1-240ENST00000570253 MYLPFQ96A32 169 aa22.52■■□□□ 1.2
PKD1-240ENST00000570253 SLC22A12Q96S37 553 aa22.52■■□□□ 1.2
PKD1-240ENST00000570253 GCNT4Q9P109 453 aa22.52■■□□□ 1.2
PKD1-240ENST00000570253 EML5Q05BV3 1969 aa22.52■■□□□ 1.2
PKD1-240ENST00000570253 MAP1BP46821 2468 aaKnown RBP22.51■■□□□ 1.19
PKD1-240ENST00000570253 FRMD3A2A2Y4 597 aa22.51■■□□□ 1.19
PKD1-240ENST00000570253 SLC9A3R1O14745 358 aaPredicted RBP22.51■■□□□ 1.19
PKD1-240ENST00000570253 BDNFP23560 247 aa22.51■■□□□ 1.19
PKD1-240ENST00000570253 PSMC1P62191 440 aaKnown RBP22.51■■□□□ 1.19
PKD1-240ENST00000570253 LMBRD2Q68DH5 695 aaPredicted RBP22.51■■□□□ 1.19
PKD1-240ENST00000570253 LSM14BQ9BX40 385 aaKnown RBP22.51■■□□□ 1.19
PKD1-240ENST00000570253 SNX25Q9H3E2 840 aa22.51■■□□□ 1.19
PKD1-240ENST00000570253 SMOC1Q9H4F8 434 aa22.51■■□□□ 1.19
PKD1-240ENST00000570253 RXFP3Q9NSD7 469 aa22.51■■□□□ 1.19
PKD1-240ENST00000570253 SIX4Q9UIU6 781 aa22.51■■□□□ 1.19
PKD1-240ENST00000570253 CHD8Q9HCK8 2581 aa22.51■■□□□ 1.19
PKD1-240ENST00000570253 HELZP42694 1942 aaKnown RBP22.51■■□□□ 1.19
PKD1-240ENST00000570253 KCNK5O95279 499 aa22.5■■□□□ 1.19
PKD1-240ENST00000570253 PMLP29590 882 aa22.5■■□□□ 1.19
PKD1-240ENST00000570253 NAIF1Q69YI7 327 aaPredicted RBP22.5■■□□□ 1.19
PKD1-240ENST00000570253 WDR49Q8IV35 697 aa22.5■■□□□ 1.19
PKD1-240ENST00000570253 KIAA1958Q8N8K9 716 aa22.5■■□□□ 1.19
PKD1-240ENST00000570253 CXorf38Q8TB03 319 aa22.5■■□□□ 1.19
PKD1-240ENST00000570253 FNBP1Q96RU3 617 aa22.5■■□□□ 1.19
PKD1-240ENST00000570253 PANK2Q9BZ23 570 aa22.5■■□□□ 1.19
PKD1-240ENST00000570253 POLR3BQ9NW08 1133 aaPredicted RBP22.5■■□□□ 1.19
PKD1-240ENST00000570253 ANAPC1Q9H1A4 1944 aa22.5■■□□□ 1.19
PKD1-240ENST00000570253 BCLAF3A2AJT9 711 aaKnown RBP22.49■■□□□ 1.19
PKD1-240ENST00000570253 TM4SF5O14894 197 aa22.49■■□□□ 1.19
PKD1-240ENST00000570253 ABL1P00519 1130 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms