RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 RPN1P04843 607 aaKnown RBP18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 TDGF1P13385 188 aa18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 GNL1P36915 607 aaPredicted RBP18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 TNNC1P63316 161 aa18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 NOP14P78316 857 aaKnown RBP18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 DPYDQ12882 1025 aa18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 MTAPQ13126 283 aa18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 TRPC3Q13507 836 aa18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 LRRC32Q14392 662 aa18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 KCNB1Q14721 858 aa18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 TDRD10Q5VZ19 366 aaKnown RBP18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 KIAA1958Q8N8K9 716 aa18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 MAB21L3Q8N8X9 362 aa18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 USP13Q92995 863 aaPredicted RBP18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 MYLPFQ96A32 169 aa18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 PCED1BQ96HM7 432 aa18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 C8orf48Q96LL4 319 aa18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 MRPL45Q9BRJ2 306 aaKnown RBP18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 ZSCAN32Q9NX65 697 aa18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 EHD2Q9NZN4 543 aa18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 NDRG2Q9UN36 371 aaKnown RBP18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 NME7Q9Y5B8 376 aa18.25■□□□□ 0.51
MAP1LC3B-208ENST00000570189 LILRB5O75023 590 aa18.24■□□□□ 0.51
MAP1LC3B-208ENST00000570189 NR3C1P04150 777 aa18.24■□□□□ 0.51
MAP1LC3B-208ENST00000570189 CCNE1P24864 410 aa18.24■□□□□ 0.51
MAP1LC3B-208ENST00000570189 CDR1P51861 262 aa18.24■□□□□ 0.51
MAP1LC3B-208ENST00000570189 MYL6P60660 151 aa18.24■□□□□ 0.51
MAP1LC3B-208ENST00000570189 PSMC1P62191 440 aaKnown RBP18.24■□□□□ 0.51
MAP1LC3B-208ENST00000570189 ITPRIPL2Q3MIP1 535 aa18.24■□□□□ 0.51
MAP1LC3B-208ENST00000570189 DGKKQ5KSL6 1271 aa18.24■□□□□ 0.51
MAP1LC3B-208ENST00000570189 SDHAF4Q5VUM1 108 aa18.24■□□□□ 0.51
MAP1LC3B-208ENST00000570189 TXNDC8Q6A555 127 aa18.24■□□□□ 0.51
MAP1LC3B-208ENST00000570189 KRBA2Q6ZNG9 492 aa18.24■□□□□ 0.51
MAP1LC3B-208ENST00000570189 SYNPOQ8N3V7 929 aa18.24■□□□□ 0.51
MAP1LC3B-208ENST00000570189 FSIP1Q8NA03 581 aa18.24■□□□□ 0.51
MAP1LC3B-208ENST00000570189 TAF4BQ92750 862 aa18.24■□□□□ 0.51
MAP1LC3B-208ENST00000570189 CCDC47Q96A33 483 aaKnown RBP18.24■□□□□ 0.51
MAP1LC3B-208ENST00000570189 SNX25Q9H3E2 840 aa18.24■□□□□ 0.51
MAP1LC3B-208ENST00000570189 MAGED2Q9UNF1 606 aaPredicted RBP18.24■□□□□ 0.51
MAP1LC3B-208ENST00000570189 R4GN57 208 aa18.24■□□□□ 0.51
MAP1LC3B-208ENST00000570189 EP300Q09472 2414 aaPredicted RBP18.23■□□□□ 0.51
MAP1LC3B-208ENST00000570189 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.23■□□□□ 0.51
MAP1LC3B-208ENST00000570189 TULP1O00294 542 aaPredicted RBP18.23■□□□□ 0.51
MAP1LC3B-208ENST00000570189 PTPN1P18031 435 aaKnown RBP18.23■□□□□ 0.51
MAP1LC3B-208ENST00000570189 PPP3CCP48454 512 aa18.23■□□□□ 0.51
MAP1LC3B-208ENST00000570189 CASP4P49662 377 aa18.23■□□□□ 0.51
MAP1LC3B-208ENST00000570189 PDE6CP51160 858 aa18.23■□□□□ 0.51
MAP1LC3B-208ENST00000570189 CCR3P51677 355 aa18.23■□□□□ 0.51
MAP1LC3B-208ENST00000570189 KPNA1P52294 538 aaPredicted RBP18.23■□□□□ 0.51
MAP1LC3B-208ENST00000570189 FAM160A1Q05DH4 1040 aa18.23■□□□□ 0.51
MAP1LC3B-208ENST00000570189 PPP2R5DQ14738 602 aa18.23■□□□□ 0.51
MAP1LC3B-208ENST00000570189 ZACNQ401N2 412 aa18.23■□□□□ 0.51
MAP1LC3B-208ENST00000570189 DENND5BQ6ZUT9 1274 aa18.23■□□□□ 0.51
MAP1LC3B-208ENST00000570189 GUF1Q8N442 669 aaKnown RBP18.23■□□□□ 0.51
MAP1LC3B-208ENST00000570189 CHAMP1Q96JM3 812 aa18.23■□□□□ 0.51
MAP1LC3B-208ENST00000570189 ELOVL4Q9GZR5 314 aa18.23■□□□□ 0.51
MAP1LC3B-208ENST00000570189 LMAN1LQ9HAT1 526 aa18.23■□□□□ 0.51
MAP1LC3B-208ENST00000570189 GTSE1Q9NYZ3 720 aa18.23■□□□□ 0.51
MAP1LC3B-208ENST00000570189 GCNT4Q9P109 453 aa18.23■□□□□ 0.51
MAP1LC3B-208ENST00000570189 CCL26Q9Y258 94 aa18.23■□□□□ 0.51
MAP1LC3B-208ENST00000570189 KIAA1549LQ6ZVL6 1849 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 CALUO43852 315 aaPredicted RBP18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 KINO60870 393 aaKnown RBP18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 VNN1O95497 513 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 PDGFRBP09619 1106 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 USP17L7P0C7H9 530 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 BDNFP23560 247 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 NRLP54845 237 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 CSTF1Q05048 431 aaKnown RBP18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 USP4Q13107 963 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 NCOA4Q13772 614 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 CCINQ13939 588 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 WDR44Q5JSH3 913 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 TXNDC11Q6PKC3 985 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 SCN4BQ8IWT1 228 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 ADSSL1Q8N142 457 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 SPEM1Q8N4L4 309 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 SUMF1Q8NBK3 374 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 B3GALNT2Q8NCR0 500 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 OR6B3Q8NGW1 331 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 ZFYVE19Q96K21 471 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 GOLPH3LQ9H4A5 285 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 HPS4Q9NQG7 708 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 SPTBN4Q9H254 2564 aa18.22■□□□□ 0.51
MAP1LC3B-208ENST00000570189 MYH10P35580 1976 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 MYO16Q9Y6X6 1858 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 TRAV19A0A0A6YYK7 116 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 PHACTR2O75167 634 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 ZNF202O95125 648 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 PRR29P0C7W0 189 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 ANXA13P27216 316 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 GRIK1P39086 918 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 CYP27A1Q02318 531 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 RUNX3Q13761 415 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 PDGFRLQ15198 375 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 ZNF77Q15935 545 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 SGSM1Q2NKQ1 1148 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 ZNF699Q32M78 642 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 ZNF667Q5HYK9 610 aa18.21■□□□□ 0.51
MAP1LC3B-208ENST00000570189 MDH1BQ5I0G3 518 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms