RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 ATP6V0A4Q9HBG4 840 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 LMBRD1Q9NUN5 540 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 SAGE1Q9NXZ1 904 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 GALNT8Q9NY28 637 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 PI4KBQ9UBF8 816 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 PCDHA13Q9Y5I0 950 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 SBF1O95248 1867 aa7.93□□□□□ -1.14
CNOT1-222ENST00000570139 SIPA1L1O43166 1804 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 CYP2D7A0A087X1C5 515 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 ENDOD1O94919 500 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 IL18RAPO95256 599 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 DBHP09172 617 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 TSHRP16473 764 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 IFNAR1P17181 557 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 FSTP19883 344 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 SYT1P21579 422 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 GNAQP50148 359 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 HK2P52789 917 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 CDC42EP1Q00587 391 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 TFAP4Q01664 338 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 MEF2AQ02078 507 aaPredicted RBP7.92□□□□□ -1.14
CNOT1-222ENST00000570139 ZP2Q05996 745 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 GABPAQ06546 454 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 PPP3CAQ08209 521 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 DAG1Q14118 895 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 NOMO1Q15155 1222 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 CHST3Q7LGC8 479 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 FOXP4Q8IVH2 680 aaPredicted RBP7.92□□□□□ -1.14
CNOT1-222ENST00000570139 RHOT1Q8IXI2 618 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 SYTL1Q8IYJ3 562 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 GPC2Q8N158 579 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 CCDC33Q8N5R6 958 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 NECAB1Q8N987 351 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 ZNF527Q8NB42 609 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 NSUN7Q8NE18 718 aaKnown RBP7.92□□□□□ -1.14
CNOT1-222ENST00000570139 IL31RAQ8NI17 732 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 CTCFLQ8NI51 663 aaPredicted RBP7.92□□□□□ -1.14
CNOT1-222ENST00000570139 FAM151AQ8WW52 585 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 SYT17Q9BSW7 474 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 MXD3Q9BW11 206 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 BTBD2Q9BX70 525 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 ZSCAN16Q9H4T2 348 aaPredicted RBP7.92□□□□□ -1.14
CNOT1-222ENST00000570139 KAT14Q9H8E8 782 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 MYOZ2Q9NPC6 264 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 TDP1Q9NUW8 608 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 NAP1L2Q9ULW6 460 aaPredicted RBP7.92□□□□□ -1.14
CNOT1-222ENST00000570139 CEP83Q9Y592 693 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 PCDHB1Q9Y5F3 818 aa7.92□□□□□ -1.14
CNOT1-222ENST00000570139 MYH15Q9Y2K3 1946 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 MAFO75444 373 aaPredicted RBP7.91□□□□□ -1.14
CNOT1-222ENST00000570139 PRDM1O75626 825 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 SEC24DO94855 1032 aaPredicted RBP7.91□□□□□ -1.14
CNOT1-222ENST00000570139 ENO2P09104 434 aaPredicted RBP7.91□□□□□ -1.14
CNOT1-222ENST00000570139 ZSCAN22P10073 491 aaPredicted RBP7.91□□□□□ -1.14
CNOT1-222ENST00000570139 CYP2D6P10635 497 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 MAPK9P45984 424 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 NOVP48745 357 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 PLCD1P51178 756 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 GEMIN4P57678 1058 aaKnown RBP7.91□□□□□ -1.14
CNOT1-222ENST00000570139 NKX6-1P78426 367 aaPredicted RBP7.91□□□□□ -1.14
CNOT1-222ENST00000570139 ST3GAL1Q11201 340 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 TBX2Q13207 712 aaPredicted RBP7.91□□□□□ -1.14
CNOT1-222ENST00000570139 KIR3DS1Q14943 382 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 CNGA2Q16280 664 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 MICU3Q86XE3 530 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 FAM126BQ8IXS8 530 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 FANCBQ8NB91 859 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 GPR156Q8NFN8 814 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 TNPO1Q92973 898 aaKnown RBP7.91□□□□□ -1.14
CNOT1-222ENST00000570139 SKA1Q96BD8 255 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 ZBED3Q96IU2 234 aaPredicted RBP7.91□□□□□ -1.14
CNOT1-222ENST00000570139 NT5C1BQ96P26 610 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 LZTS2Q9BRK4 669 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 ANP32EQ9BTT0 268 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 OR10A5Q9H207 317 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 MANSC1Q9H8J5 431 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 TNFRSF12AQ9NP84 129 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 DDX4Q9NQI0 724 aaKnown RBP7.91□□□□□ -1.14
CNOT1-222ENST00000570139 PCDHGB2Q9Y5G2 931 aa7.91□□□□□ -1.14
CNOT1-222ENST00000570139 ZNF839A8K0R7 811 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 NOTOA8MTQ0 251 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 C1QTNF9BB2RNN3 333 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 H3BQV1 296 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 FFAR2O15552 330 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 SKAP2O75563 359 aaPredicted RBP7.9□□□□□ -1.14
CNOT1-222ENST00000570139 CSTBP04080 98 aaKnown RBP7.9□□□□□ -1.14
CNOT1-222ENST00000570139 THP07101 528 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 PARP1P09874 1014 aaKnown RBP7.9□□□□□ -1.14
CNOT1-222ENST00000570139 TOP1P11387 765 aaKnown RBP7.9□□□□□ -1.14
CNOT1-222ENST00000570139 BRAFP15056 766 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 PNLIPP16233 465 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 XBP1P17861 261 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 SLC7A1P30825 629 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 TROAPQ12815 778 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 TRIM29Q14134 588 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 SIM2Q14190 667 aaPredicted RBP7.9□□□□□ -1.14
CNOT1-222ENST00000570139 NR1I3Q14994 352 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 ATL3Q6DD88 541 aa7.9□□□□□ -1.14
CNOT1-222ENST00000570139 HIBCHQ6NVY1 386 aaPredicted RBP7.9□□□□□ -1.14
CNOT1-222ENST00000570139 TATDN1Q6P1N9 297 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms