RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 MRIQ9BWK5 157 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 AMNQ9BXJ7 453 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 MANSC1Q9H8J5 431 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 JMJD4Q9H9V9 463 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 VEZTQ9HBM0 779 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 ZCCHC17Q9NP64 241 aaKnown RBP3.62□□□□□ -1.83
CNOT1-221ENST00000569924 SACM1LQ9NTJ5 587 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.62□□□□□ -1.83
CNOT1-221ENST00000569924 KCMF1Q9P0J7 381 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 KIF17Q9P2E2 1029 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 ARHGAP28Q9P2N2 729 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 ZNF70Q9UC06 446 aaPredicted RBP3.62□□□□□ -1.83
CNOT1-221ENST00000569924 EBF1Q9UH73 591 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 FEZ2Q9UHY8 353 aaPredicted RBP3.62□□□□□ -1.83
CNOT1-221ENST00000569924 ACSL6Q9UKU0 697 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 PCDHA6Q9UN73 950 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 FZD1Q9UP38 647 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 PCDHAC2Q9Y5I4 1007 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 AOX1Q06278 1338 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 RPTORQ8N122 1335 aa3.62□□□□□ -1.83
CNOT1-221ENST00000569924 ARAP2Q8WZ64 1704 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 TMEM265A0A087WTH1 108 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 CCL15-CCL14A0A0B4J2E2 113 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 LOC100996750A0A140TA64 210 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 A0A1W2PQJ5 194 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 A0A1W2PRQ8 180 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 HMX2A2RU54 273 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 TRIM43BA6NCK2 446 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 CLCA1A8K7I4 914 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 F5H0A9 414 aaPredicted RBP3.61□□□□□ -1.83
CNOT1-221ENST00000569924 F8W031 263 aaPredicted RBP3.61□□□□□ -1.83
CNOT1-221ENST00000569924 SNAP23O00161 211 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 AKR1B10O60218 316 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 CUTAO60888 179 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 PHF2O75151 1096 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 MT-ND5P03915 603 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 ITGA5P08648 1049 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 CETPP11597 493 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 ATP1A3P13637 1013 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 SYN1P17600 705 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 MALP21145 153 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 APEX1P27695 318 aaKnown RBP3.61□□□□□ -1.83
CNOT1-221ENST00000569924 HIBADHP31937 336 aaKnown RBP3.61□□□□□ -1.83
CNOT1-221ENST00000569924 RAD52P43351 418 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 AFMP43652 599 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 SLC6A9P48067 706 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 FLT3LGP49771 235 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 RBM5P52756 815 aaKnown RBP eCLIP3.61□□□□□ -1.83
CNOT1-221ENST00000569924 CLNS1AP54105 237 aaKnown RBP3.61□□□□□ -1.83
CNOT1-221ENST00000569924 TERF1P54274 439 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 RPS16P62249 146 aaKnown RBP3.61□□□□□ -1.83
CNOT1-221ENST00000569924 CAP1Q01518 475 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 MEF2AQ02078 507 aaPredicted RBP3.61□□□□□ -1.83
CNOT1-221ENST00000569924 CREMQ03060 361 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 TLE1Q04724 770 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 NFATC3Q12968 1075 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 VGLL4Q14135 290 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 MBTPS1Q14703 1052 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 RAB30Q15771 203 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 CCL15Q16663 113 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 CCDC57Q2TAC2 916 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 SLC9C1Q4G0N8 1177 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 SLC45A4Q5BKX6 768 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 MFSD14BQ5SR56 506 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 BEND3Q5T5X7 828 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 FKBP1CQ5VVH2 108 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 GALNT18Q6P9A2 607 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 GADL1Q6ZQY3 521 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 BMP8AQ7Z5Y6 402 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 RSPH3Q86UC2 560 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 PPP1R3BQ86XI6 285 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 FAM129CQ86XR2 697 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 SIAH1Q8IUQ4 282 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 FTSJ3Q8IY81 847 aaKnown RBP3.61□□□□□ -1.83
CNOT1-221ENST00000569924 SDR16C5Q8N3Y7 309 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 FBXL6Q8N531 539 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 CELF5Q8N6W0 485 aaKnown RBP3.61□□□□□ -1.83
CNOT1-221ENST00000569924 OR6B3Q8NGW1 331 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 PPP1R14CQ8TAE6 165 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 ADAMTS18Q8TE60 1221 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 HERVK_113Q902F9 699 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 CENPIQ92674 756 aaPredicted RBP3.61□□□□□ -1.83
CNOT1-221ENST00000569924 TRIM43Q96BQ3 446 aaPredicted RBP3.61□□□□□ -1.83
CNOT1-221ENST00000569924 CYFIP2Q96F07 1278 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 SNX22Q96L94 193 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 BARD1Q99728 777 aaKnown RBP3.61□□□□□ -1.83
CNOT1-221ENST00000569924 GDF15Q99988 308 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 NUDT16L1Q9BRJ7 211 aaKnown RBP3.61□□□□□ -1.83
CNOT1-221ENST00000569924 PYM1Q9BRP8 204 aaKnown RBP3.61□□□□□ -1.83
CNOT1-221ENST00000569924 LSM14BQ9BX40 385 aaKnown RBP3.61□□□□□ -1.83
CNOT1-221ENST00000569924 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 TRIM54Q9BYV2 358 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 DPH1Q9BZG8 443 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 SENP6Q9GZR1 1112 aaPredicted RBP3.61□□□□□ -1.83
CNOT1-221ENST00000569924 ADAM7Q9H2U9 754 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 TDRD3Q9H7E2 651 aaKnown RBP3.61□□□□□ -1.83
CNOT1-221ENST00000569924 TMEM8AQ9HCN3 771 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 NECTIN3Q9NQS3 549 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 INCENPQ9NQS7 918 aa3.61□□□□□ -1.83
CNOT1-221ENST00000569924 SMYD2Q9NRG4 433 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms