RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 KCNB1Q14721 858 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 MTF1Q14872 753 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 E2F4Q16254 413 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 FSTL4Q6MZW2 842 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 FAM171BQ6P995 826 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 VSTM1Q6UX27 236 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 CBWD2Q8IUF1 395 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 TTC16Q8NEE8 873 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 OR5B17Q8NGF7 314 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 NETO1Q8TDF5 533 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 OSCP1Q8WVF1 389 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 ATP2A3Q93084 1043 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 HPS3Q969F9 1004 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 DHX58Q96C10 678 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 CEP295NLQ96MC4 621 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 FNBP1Q96RU3 617 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 MMS19Q96T76 1030 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 P2RY13Q9BPV8 354 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 MAGEF1Q9HAY2 307 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 SEMA4GQ9NTN9 838 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 C2orf42Q9NWW7 574 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 DUS2Q9NX74 493 aaKnown RBP14.04□□□□□ -0.16
SPG7-221ENST00000569720 EHD2Q9NZN4 543 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 NCOR2Q9Y618 2525 aa14.04□□□□□ -0.16
SPG7-221ENST00000569720 CCDC163A0A0D9SF12 145 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 HCRTO43612 131 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 YEATS4O95619 227 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 PDGFRBP09619 1106 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 ARSAP15289 507 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 WARSP23381 471 aaKnown RBP14.03□□□□□ -0.16
SPG7-221ENST00000569720 GJA4P35212 333 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 GRIK1P39086 918 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 PSMC1P62191 440 aaKnown RBP14.03□□□□□ -0.16
SPG7-221ENST00000569720 SNRPFP62306 86 aaKnown RBP14.03□□□□□ -0.16
SPG7-221ENST00000569720 CSRP2Q16527 193 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 SNRNP35Q16560 246 aaKnown RBP14.03□□□□□ -0.16
SPG7-221ENST00000569720 FBXO43Q4G163 708 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 FAM26FQ5R3K3 315 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 SCARA3Q6AZY7 606 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 TRAPPC11Q7Z392 1133 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 LIMS2Q7Z4I7 341 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 RDH13Q8NBN7 331 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 GLIS3Q8NEA6 775 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 ZNF507Q8TCN5 953 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 KBTBD7Q8WVZ9 684 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 MYLPFQ96A32 169 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 SPATA17Q96L03 361 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 CYP2S1Q96SQ9 504 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 SNX25Q9H3E2 840 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 ECT2Q9H8V3 914 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 TRPM5Q9NZQ8 1165 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 TFIP11Q9UBB9 837 aaKnown RBP14.03□□□□□ -0.16
SPG7-221ENST00000569720 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.03□□□□□ -0.16
SPG7-221ENST00000569720 UBE4BO95155 1302 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 PTPRJQ12913 1337 aa14.03□□□□□ -0.16
SPG7-221ENST00000569720 OTOL1A6NHN0 477 aaPredicted RBP14.02□□□□□ -0.17
SPG7-221ENST00000569720 TRIM66O15016 1216 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 RNF40O75150 1001 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 ATP2C2O75185 946 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 EGFP01133 1207 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 CCDC192P0DO97 292 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 DLATP10515 647 aaKnown RBP14.02□□□□□ -0.17
SPG7-221ENST00000569720 HDCP19113 662 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 BDNFP23560 247 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 LMO2P25791 158 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 GALK1P51570 392 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 CYP27A1Q02318 531 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 USP4Q13107 963 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 ZNF77Q15935 545 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 CCDC142Q17RM4 750 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 CNNM4Q6P4Q7 775 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 PRR23CQ6ZRP0 262 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 DENND5BQ6ZUT9 1274 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 EPM2AIP1Q7L775 607 aaPredicted RBP14.02□□□□□ -0.17
SPG7-221ENST00000569720 HS2ST1Q7LGA3 356 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 CACNA2D4Q7Z3S7 1137 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 CAMKK1Q8N5S9 505 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 FAM160A2Q8N612 972 aaPredicted RBP14.02□□□□□ -0.17
SPG7-221ENST00000569720 ARL14EPQ8N8R7 260 aaPredicted RBP14.02□□□□□ -0.17
SPG7-221ENST00000569720 XXYLT1Q8NBI6 393 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 SPRYD3Q8NCJ5 442 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 CCDC26Q8TAB7 109 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 RIN3Q8TB24 985 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 GAB3Q8WWW8 586 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 CD101Q93033 1021 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 C7orf25Q9BPX7 421 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 AGPAT3Q9NRZ7 376 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 CGNQ9P2M7 1197 aaKnown RBP14.02□□□□□ -0.17
SPG7-221ENST00000569720 SPTBN2O15020 2390 aa14.02□□□□□ -0.17
SPG7-221ENST00000569720 MYO16Q9Y6X6 1858 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.01□□□□□ -0.17
SPG7-221ENST00000569720 DCDC2BA2VCK2 349 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 C2orf78A6NCI8 922 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 TACC1O75410 805 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 RPP40O75818 363 aaKnown RBP14.01□□□□□ -0.17
SPG7-221ENST00000569720 NFATC1O95644 943 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 F13A1P00488 732 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 FAM163BP0C2L3 166 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 TCF3P15923 654 aa14.01□□□□□ -0.17
SPG7-221ENST00000569720 PFKLP17858 780 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms