RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 AFMP43652 599 aa14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 CXCL12P48061 93 aa14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 LHX1P48742 406 aa14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 CCR3P51677 355 aa14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 USP4Q13107 963 aa14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 ZNF77Q15935 545 aa14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 TAF12Q16514 161 aa14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 DUOXA2Q1HG44 320 aa14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 SCN4BQ8IWT1 228 aa14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 KIAA0895Q8NCT3 520 aa14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 IER2Q9BTL4 223 aa14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 FAM126AQ9BYI3 521 aaPredicted RBP14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 XYLT2Q9H1B5 865 aa14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 TDP1Q9NUW8 608 aa14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 SERTAD1Q9UHV2 236 aa14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 UBE4BO95155 1302 aa14.82□□□□□ -0.04
GTF3C1-211ENST00000569653 MED19A0JLT2 244 aaPredicted RBP14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 PCSK1P29120 753 aa14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 AVPR1AP37288 418 aa14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 ME1P48163 572 aa14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 MYL6P60660 151 aa14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 RPL10AP62906 217 aaKnown RBP14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 PLCB2Q00722 1185 aa14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 STK4Q13043 487 aa14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 RUNX3Q13761 415 aa14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 ZNF268Q14587 947 aaPredicted RBP14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 TMEM196Q5HYL7 178 aa14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 STXBP4Q6ZWJ1 553 aa14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 DPH6Q7L8W6 267 aa14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 SPATA2LQ8IUW3 424 aaPredicted RBP14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 C12orf56Q8IXR9 622 aa14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 MRPS31Q92665 395 aaKnown RBP14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 PCED1BQ96HM7 432 aa14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 FUBP3Q96I24 572 aaKnown RBP eCLIP14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 LRRC27Q9C0I9 530 aa14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 TRPC7Q9HCX4 862 aa14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 DLL3Q9NYJ7 618 aa14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 NCDNQ9UBB6 729 aa14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 RCOR1Q9UKL0 485 aa14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 CDH9Q9ULB4 789 aa14.81□□□□□ -0.04
GTF3C1-211ENST00000569653 MYH10P35580 1976 aa14.8□□□□□ -0.04
GTF3C1-211ENST00000569653 EGFP01133 1207 aa14.8□□□□□ -0.04
GTF3C1-211ENST00000569653 DDX6P26196 483 aaKnown RBP eCLIP14.8□□□□□ -0.045e-6■■■■■ 34.8
GTF3C1-211ENST00000569653 AMPD3Q01432 767 aa14.8□□□□□ -0.04
GTF3C1-211ENST00000569653 MYO1EQ12965 1108 aa14.8□□□□□ -0.04
GTF3C1-211ENST00000569653 LRRC32Q14392 662 aa14.8□□□□□ -0.04
GTF3C1-211ENST00000569653 MTF1Q14872 753 aa14.8□□□□□ -0.04
GTF3C1-211ENST00000569653 SURF1Q15526 300 aa14.8□□□□□ -0.04
GTF3C1-211ENST00000569653 MDH1BQ5I0G3 518 aa14.8□□□□□ -0.04
GTF3C1-211ENST00000569653 DGKKQ5KSL6 1271 aa14.8□□□□□ -0.04
GTF3C1-211ENST00000569653 HEATR6Q6AI08 1181 aaKnown RBP14.8□□□□□ -0.04
GTF3C1-211ENST00000569653 ARL14EPQ8N8R7 260 aaPredicted RBP14.8□□□□□ -0.04
GTF3C1-211ENST00000569653 XXYLT1Q8NBI6 393 aa14.8□□□□□ -0.04
GTF3C1-211ENST00000569653 SDCBP2Q9H190 292 aa14.8□□□□□ -0.04
GTF3C1-211ENST00000569653 MAGEF1Q9HAY2 307 aa14.8□□□□□ -0.04
GTF3C1-211ENST00000569653 KIAA1586Q9HCI6 787 aa14.8□□□□□ -0.04
GTF3C1-211ENST00000569653 WNT6Q9Y6F9 365 aa14.8□□□□□ -0.04
GTF3C1-211ENST00000569653 PVALEFA0A1B0GWK0 134 aa14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 CLDN5O00501 218 aa14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 TRDMT1O14717 391 aaKnown RBP14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 TNNI1P19237 187 aa14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 GJA4P35212 333 aa14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 FAM160A1Q05DH4 1040 aa14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 RSPO4Q2I0M5 234 aaPredicted RBP14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 GAB4Q2WGN9 574 aa14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 TDRD10Q5VZ19 366 aaKnown RBP14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 C1orf228Q6PIY5 440 aa14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 ERMP1Q7Z2K6 904 aa14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 MYCBPAPQ8TBZ2 947 aa14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 PAGE5Q96GU1 130 aa14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 MMS19Q96T76 1030 aa14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 ZNF518BQ9C0D4 1074 aa14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 LINC00597Q9H2U6 94 aa14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 KCTD10Q9H3F6 313 aa14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 SMYD3Q9H7B4 428 aa14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 KIF9Q9HAQ2 790 aa14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 DMAC2Q9NW81 257 aa14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 THG1LQ9NWX6 298 aaKnown RBP14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 ZMYM5Q9UJ78 669 aa14.79□□□□□ -0.04
GTF3C1-211ENST00000569653 LRRIQ3A6PVS8 624 aaPredicted RBP14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 SOBPA7XYQ1 873 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 F8VP50 259 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 TACC1O75410 805 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 VNN1O95497 513 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 SLFN14P0C7P3 912 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 PFKFB1P16118 471 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 GNL1P36915 607 aaPredicted RBP14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 RAP1GAPP47736 663 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 PXNP49023 591 aaPredicted RBP14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 CDH8P55286 799 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 DLG4P78352 724 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 CYP27A1Q02318 531 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 KNOP1Q1ED39 458 aaKnown RBP14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 EML3Q32P44 896 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 WDR72Q3MJ13 1102 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 KMT5BQ4FZB7 885 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 C1orf220Q5T0J3 134 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 PAQR9Q6ZVX9 377 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 SH3RF2Q8TEC5 729 aa14.78□□□□□ -0.04
GTF3C1-211ENST00000569653 SPATA17Q96L03 361 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms