RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 RSAD2Q8WXG1 361 aa13.61□□□□□ -0.23
CDT1-203ENST00000569140 SMARCD1Q96GM5 515 aa13.61□□□□□ -0.23
CDT1-203ENST00000569140 TMEM176AQ96HP8 235 aa13.61□□□□□ -0.23
CDT1-203ENST00000569140 PMM2O15305 246 aa13.6□□□□□ -0.23
CDT1-203ENST00000569140 DCXO43602 365 aa13.6□□□□□ -0.23
CDT1-203ENST00000569140 KRT5P13647 590 aa13.6□□□□□ -0.23
CDT1-203ENST00000569140 CDC25CP30307 473 aa13.6□□□□□ -0.23
CDT1-203ENST00000569140 CACNA2D1P54289 1103 aa13.6□□□□□ -0.23
CDT1-203ENST00000569140 EXOC3L4Q17RC7 722 aa13.6□□□□□ -0.23
CDT1-203ENST00000569140 TMEM270Q6UE05 265 aa13.6□□□□□ -0.23
CDT1-203ENST00000569140 TMC8Q8IU68 726 aa13.6□□□□□ -0.23
CDT1-203ENST00000569140 WHAMMQ8TF30 809 aa13.6□□□□□ -0.23
CDT1-203ENST00000569140 KAT5Q92993 513 aa13.6□□□□□ -0.23
CDT1-203ENST00000569140 CYFIP2Q96F07 1278 aa13.6□□□□□ -0.23
CDT1-203ENST00000569140 FAXDC2Q96IV6 333 aa13.6□□□□□ -0.23
CDT1-203ENST00000569140 KXD1Q9BQD3 176 aa13.6□□□□□ -0.23
CDT1-203ENST00000569140 VPS16Q9H269 839 aa13.6□□□□□ -0.23
CDT1-203ENST00000569140 NDST4Q9H3R1 872 aa13.6□□□□□ -0.23
CDT1-203ENST00000569140 TRPC7Q9HCX4 862 aa13.6□□□□□ -0.23
CDT1-203ENST00000569140 UBE2TQ9NPD8 197 aaPredicted RBP13.6□□□□□ -0.23
CDT1-203ENST00000569140 DMAP1Q9NPF5 467 aaPredicted RBP13.6□□□□□ -0.23
CDT1-203ENST00000569140 AVENQ9NQS1 362 aaPredicted RBP13.6□□□□□ -0.23
CDT1-203ENST00000569140 EPS15L1Q9UBC2 864 aa13.6□□□□□ -0.23
CDT1-203ENST00000569140 UXTQ9UBK9 157 aaPredicted RBP13.6□□□□□ -0.23
CDT1-203ENST00000569140 ZFP37Q9Y6Q3 630 aaPredicted RBP13.6□□□□□ -0.23
CDT1-203ENST00000569140 NUMBLQ9Y6R0 609 aa13.6□□□□□ -0.23
CDT1-203ENST00000569140 C5orf42Q9H799 3197 aa13.6□□□□□ -0.23
CDT1-203ENST00000569140 BECN2A8MW95 431 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 NRG2O14511 850 aaPredicted RBP13.59□□□□□ -0.23
CDT1-203ENST00000569140 ABL1P00519 1130 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 FAM200BP0CF97 657 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 SLC9A1P19634 815 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 USP8P40818 1118 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 RAD23BP54727 409 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 EPHA5P54756 1037 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 MFAP3P55082 362 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 MAP3K7CLP57077 242 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 PTPN21Q16825 1174 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 ARHGAP44Q17R89 818 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 STXBP5Q5T5C0 1151 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 GPR158Q5T848 1215 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 TRIM65Q6PJ69 517 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 DENND5BQ6ZUT9 1274 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 MTSS1LQ765P7 747 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 GPIHBP1Q8IV16 184 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 FUKQ8N0W3 1084 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 CRYBG2Q8N1P7 616 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 SLC4A11Q8NBS3 891 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 TTC16Q8NEE8 873 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 LMO3Q8TAP4 145 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 KHSRPQ92945 711 aaKnown RBP eCLIP13.59□□□□□ -0.23
CDT1-203ENST00000569140 KCNK16Q96T55 309 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 KCNK12Q9HB15 430 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 GDE1Q9NZC3 331 aa13.59□□□□□ -0.23
CDT1-203ENST00000569140 DOCK6Q96HP0 2047 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 SMTNL1A8MU46 457 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 NOL4O94818 638 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 ALADP13716 330 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 HMGA1P17096 107 aaKnown RBP13.58□□□□□ -0.24
CDT1-203ENST00000569140 ZNF165P49910 485 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 APBA1Q02410 837 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 KRT31Q15323 416 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 GOLGA7BQ2TAP0 167 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 ZSCAN23Q3MJ62 389 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 MIIPQ5JXC2 388 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 FKBP15Q5T1M5 1219 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 PPP1R26Q5T8A7 1209 aaPredicted RBP13.58□□□□□ -0.24
CDT1-203ENST00000569140 CDKAL1Q5VV42 579 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 GJB7Q6PEY0 223 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 PARM1Q6UWI2 310 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 GAREM2Q75VX8 874 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 RBBP8NLQ8NC74 664 aaPredicted RBP13.58□□□□□ -0.24
CDT1-203ENST00000569140 ZSCAN18Q8TBC5 510 aaPredicted RBP13.58□□□□□ -0.24
CDT1-203ENST00000569140 MRPS31Q92665 395 aaKnown RBP13.58□□□□□ -0.24
CDT1-203ENST00000569140 SPATA17Q96L03 361 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 C8orf48Q96LL4 319 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 PCMTD1Q96MG8 357 aaPredicted RBP13.58□□□□□ -0.24
CDT1-203ENST00000569140 LRRC3Q9BY71 257 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 SMOC2Q9H3U7 446 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 EHD2Q9NZN4 543 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 IGSF9Q9P2J2 1179 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 SORCS3Q9UPU3 1222 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 PTPRDP23468 1912 aa13.58□□□□□ -0.24
CDT1-203ENST00000569140 NOTCH4Q99466 2003 aa13.57□□□□□ -0.24
CDT1-203ENST00000569140 GTPBP10A4D1E9 387 aaKnown RBP13.57□□□□□ -0.24
CDT1-203ENST00000569140 DPYSL4O14531 572 aa13.57□□□□□ -0.24
CDT1-203ENST00000569140 MOSPD3O75425 235 aa13.57□□□□□ -0.24
CDT1-203ENST00000569140 MICAL2O94851 1124 aa13.57□□□□□ -0.24
CDT1-203ENST00000569140 PON1P27169 355 aa13.57□□□□□ -0.24
CDT1-203ENST00000569140 SLC8A3P57103 927 aa13.57□□□□□ -0.24
CDT1-203ENST00000569140 USP46P62068 366 aa13.57□□□□□ -0.24
CDT1-203ENST00000569140 GCNT1Q02742 428 aa13.57□□□□□ -0.24
CDT1-203ENST00000569140 HTR4Q13639 388 aa13.57□□□□□ -0.24
CDT1-203ENST00000569140 NFKBIBQ15653 356 aa13.57□□□□□ -0.24
CDT1-203ENST00000569140 SGO2Q562F6 1265 aa13.57□□□□□ -0.24
CDT1-203ENST00000569140 FAM78AQ5JUQ0 283 aa13.57□□□□□ -0.24
CDT1-203ENST00000569140 PHLDB3Q6NSJ2 640 aa13.57□□□□□ -0.24
CDT1-203ENST00000569140 PAQR9Q6ZVX9 377 aa13.57□□□□□ -0.24
CDT1-203ENST00000569140 NUP93Q8N1F7 819 aa13.57□□□□□ -0.24
CDT1-203ENST00000569140 MAB21L3Q8N8X9 362 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms