RNA–Protein interactions for RNA: ENST00000568820.5

LYRM1-210, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-210ENST00000568820 SGO2Q562F6 1265 aa11.82□□□□□ -0.52
LYRM1-210ENST00000568820 LRRC38Q5VT99 294 aa11.82□□□□□ -0.52
LYRM1-210ENST00000568820 RNF135Q8IUD6 432 aa11.82□□□□□ -0.52
LYRM1-210ENST00000568820 KATNAL2Q8IYT4 538 aa11.82□□□□□ -0.52
LYRM1-210ENST00000568820 C12orf50Q8NA57 414 aaPredicted RBP11.82□□□□□ -0.52
LYRM1-210ENST00000568820 SLC4A11Q8NBS3 891 aa11.82□□□□□ -0.52
LYRM1-210ENST00000568820 HEXIM2Q96MH2 286 aaKnown RBP11.82□□□□□ -0.52
LYRM1-210ENST00000568820 NT5C1AQ9BXI3 368 aa11.82□□□□□ -0.52
LYRM1-210ENST00000568820 SYNCQ9H7C4 482 aa11.82□□□□□ -0.52
LYRM1-210ENST00000568820 PARP2Q9UGN5 583 aa11.82□□□□□ -0.52
LYRM1-210ENST00000568820 SEPT4O43236 478 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 SNX16P57768 344 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 NKX3-2P78367 333 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 ZNF268Q14587 947 aaPredicted RBP11.81□□□□□ -0.52
LYRM1-210ENST00000568820 ZBTB6Q15916 424 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 ODF2Q5BJF6 829 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 CCDC137Q6PK04 289 aaKnown RBP11.81□□□□□ -0.52
LYRM1-210ENST00000568820 ALKAL1Q6UXT8 129 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 ADAT2Q7Z6V5 191 aaKnown RBP11.81□□□□□ -0.52
LYRM1-210ENST00000568820 PHLDB2Q86SQ0 1253 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 HACE1Q8IYU2 909 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 EXD1Q8NHP7 514 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 IPO4Q8TEX9 1081 aaKnown RBP11.81□□□□□ -0.52
LYRM1-210ENST00000568820 C18orf8Q96DM3 657 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 RBM41Q96IZ5 413 aaKnown RBP11.81□□□□□ -0.52
LYRM1-210ENST00000568820 ZNF560Q96MR9 790 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 GDAP1L1Q96MZ0 367 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 ERP44Q9BS26 406 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 EIF2AQ9BY44 585 aaKnown RBP11.81□□□□□ -0.52
LYRM1-210ENST00000568820 CELF4Q9BZC1 486 aaKnown RBP11.81□□□□□ -0.52
LYRM1-210ENST00000568820 FAM129AQ9BZQ8 928 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 SDCBP2Q9H190 292 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 UPF3AQ9H1J1 476 aaKnown RBP11.81□□□□□ -0.52
LYRM1-210ENST00000568820 CYLDQ9NQC7 956 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.81□□□□□ -0.52
LYRM1-210ENST00000568820 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.81□□□□□ -0.52
LYRM1-210ENST00000568820 ANK1P16157 1881 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 TCRBV5S1A1TA0A578 114 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 ZSCAN5CA6NGD5 496 aaPredicted RBP11.81□□□□□ -0.52
LYRM1-210ENST00000568820 SIGLEC16A6NMB1 481 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 RECQL4O94761 1208 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 KCNE1P15382 129 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 SSR1P43307 286 aaKnown RBP11.81□□□□□ -0.52
LYRM1-210ENST00000568820 NDST1P52848 882 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 NOGQ13253 232 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 MTMR3Q13615 1198 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 DENND1BQ6P3S1 775 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 SYDE1Q6ZW31 735 aaPredicted RBP11.81□□□□□ -0.52
LYRM1-210ENST00000568820 UNC93AQ86WB7 457 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 CCDC50Q8IVM0 306 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 CCDC105Q8IYK2 499 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 RCOR2Q8IZ40 523 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 WDTC1Q8N5D0 677 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 NIPA2Q8N8Q9 360 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 PRELID2Q8N945 189 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 FNIP1Q8TF40 1166 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 GRK7Q8WTQ7 553 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 MCEEQ96PE7 176 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 TRIM7Q9C029 511 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 ELOVL4Q9GZR5 314 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 LRRC19Q9H756 370 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 DDX56Q9NY93 547 aaKnown RBP11.81□□□□□ -0.52
LYRM1-210ENST00000568820 GTF2IRD1Q9UHL9 959 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 NR2E1Q9Y466 385 aa11.81□□□□□ -0.52
LYRM1-210ENST00000568820 M0QYV0 167 aa11.8□□□□□ -0.52
LYRM1-210ENST00000568820 POLR3GO15318 223 aaPredicted RBP11.8□□□□□ -0.52
LYRM1-210ENST00000568820 MICAL2O94851 1124 aa11.8□□□□□ -0.52
LYRM1-210ENST00000568820 KRT3P12035 628 aa11.8□□□□□ -0.52
LYRM1-210ENST00000568820 CYP3A5P20815 502 aa11.8□□□□□ -0.52
LYRM1-210ENST00000568820 COILP38432 576 aaPredicted RBP11.8□□□□□ -0.52
LYRM1-210ENST00000568820 FLT3LGP49771 235 aa11.8□□□□□ -0.52
LYRM1-210ENST00000568820 MRPS6P82932 125 aaKnown RBP11.8□□□□□ -0.52
LYRM1-210ENST00000568820 ACAP1Q15027 740 aa11.8□□□□□ -0.52
LYRM1-210ENST00000568820 AADACL2Q6P093 401 aa11.8□□□□□ -0.52
LYRM1-210ENST00000568820 JAMLQ86YT9 394 aa11.8□□□□□ -0.52
LYRM1-210ENST00000568820 LINC00528Q8N1L1 170 aa11.8□□□□□ -0.52
LYRM1-210ENST00000568820 TRPV1Q8NER1 839 aa11.8□□□□□ -0.52
LYRM1-210ENST00000568820 TRIB2Q92519 343 aa11.8□□□□□ -0.52
LYRM1-210ENST00000568820 SLCO2A1Q92959 643 aa11.8□□□□□ -0.52
LYRM1-210ENST00000568820 TSEN34Q9BSV6 310 aaKnown RBP11.8□□□□□ -0.52
LYRM1-210ENST00000568820 NXF3Q9H4D5 531 aaKnown RBP11.8□□□□□ -0.52
LYRM1-210ENST00000568820 PLEKHA4Q9H4M7 779 aa11.8□□□□□ -0.52
LYRM1-210ENST00000568820 ERVK-5Q9HDB9 667 aa11.8□□□□□ -0.52
LYRM1-210ENST00000568820 USTQ9Y2C2 406 aa11.8□□□□□ -0.52
LYRM1-210ENST00000568820 SNX9Q9Y5X1 595 aa11.8□□□□□ -0.52
LYRM1-210ENST00000568820 H3BQF6 201 aa11.79□□□□□ -0.52
LYRM1-210ENST00000568820 O00370 1275 aa11.79□□□□□ -0.52
LYRM1-210ENST00000568820 DAPK3O43293 454 aa11.79□□□□□ -0.52
LYRM1-210ENST00000568820 ECEL1O95672 775 aa11.79□□□□□ -0.52
LYRM1-210ENST00000568820 ADH1AP07327 375 aa11.79□□□□□ -0.52
LYRM1-210ENST00000568820 RARAP10276 462 aa11.79□□□□□ -0.52
LYRM1-210ENST00000568820 DESP17661 470 aa11.79□□□□□ -0.52
LYRM1-210ENST00000568820 CTGFP29279 349 aa11.79□□□□□ -0.52
LYRM1-210ENST00000568820 HSPA9P38646 679 aaKnown RBP11.79□□□□□ -0.52
LYRM1-210ENST00000568820 GABRB2P47870 512 aa11.79□□□□□ -0.52
LYRM1-210ENST00000568820 GUCY2FP51841 1108 aa11.79□□□□□ -0.52
LYRM1-210ENST00000568820 PSMC1P62191 440 aaKnown RBP11.79□□□□□ -0.52
LYRM1-210ENST00000568820 RPL7AP62424 266 aaKnown RBP11.79□□□□□ -0.52
LYRM1-210ENST00000568820 ZNF200P98182 395 aaPredicted RBP11.79□□□□□ -0.52
LYRM1-210ENST00000568820 HADHQ16836 314 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms