RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 MOCS2O96007 188 aaPredicted RBP12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 BRCC3P46736 316 aa12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 VCPIP1Q96JH7 1222 aa12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 TSEN34Q9BSV6 310 aaKnown RBP12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 LRRC1Q9BTT6 524 aa12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 KATNBL1Q9H079 304 aa12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 GREB1LQ9C091 1923 aaPredicted RBP12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 MAP3K6O95382 1288 aa12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 EDN1P05305 212 aa12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 TLE2Q04725 743 aa12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 GRIK3Q13003 919 aa12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 MTFR1Q15390 333 aa12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 C1orf220Q5T0J3 134 aa12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 CCDC33Q8N5R6 958 aa12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 NOA1Q8NC60 698 aaKnown RBP12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 TLR10Q9BXR5 811 aa12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 SNX24Q9Y343 169 aa12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 MBLAC1A4D2B0 266 aaPredicted RBP12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 NCAM1P13591 858 aa12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 PTPN1P18031 435 aaKnown RBP12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 RPL9P32969 192 aaKnown RBP12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 BTG3Q14201 252 aaPredicted RBP12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 FAM114A2Q9NRY5 505 aa12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 MAD1L1Q9Y6D9 718 aa12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 ATAD5Q96QE3 1844 aa12.75□□□□□ -0.37
TMEM170A-205ENST00000568559 E5RJQ4 531 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 PROSCO94903 275 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 ATP2A2P16615 1042 aaKnown RBP12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 NOMO3P69849 1222 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 TUSC3Q13454 348 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 KCNT1Q5JUK3 1230 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 CCDC137Q6PK04 289 aaKnown RBP12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 NECAB2Q7Z6G3 386 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 RCOR2Q8IZ40 523 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 NSMCE1Q8WV22 266 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 PGLYRP2Q96PD5 576 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 CARD9Q9H257 536 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 NFU1Q9UMS0 254 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 CCDC151A5D8V7 595 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 GOLGA6BA6NDN3 693 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 CKBP12277 381 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 CLCNKBP51801 687 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 EFHC2Q5JST6 749 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 FBXO38Q6PIJ6 1188 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 TMEM86AQ8N2M4 240 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 SLC7A14Q8TBB6 771 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 RXFP2Q8WXD0 754 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 MRPL9Q9BYD2 267 aaKnown RBP12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 CACNG4Q9UBN1 327 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 TTC7AQ9ULT0 858 aaPredicted RBP12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 RBAK-RBAKDNI3L0D1 243 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 SETSIPP0DME0 302 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 GYS2P54840 703 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 WNT7BP56706 349 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 GLE1Q53GS7 698 aaKnown RBP12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 DPF3Q92784 378 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 P3H4Q92791 437 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 OSBPL8Q9BZF1 889 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 ELOVL4Q9GZR5 314 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 ISCUQ9H1K1 167 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 CWC15Q9P013 229 aaKnown RBP12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 CCDC78A2IDD5 438 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 NT5C1B-RDH14C9J2C7 533 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 CILPO75339 1184 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 FGFR1P11362 822 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 FECHP22830 423 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 CYP2C18P33260 490 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 CLCN6P51797 869 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 TKTL1P51854 596 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 DEUP1Q05D60 604 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 PDCLQ13371 301 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 KRT71Q3SY84 523 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 ZNF280DQ6N043 979 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 LLGL2Q6P1M3 1020 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 CTU1Q7Z7A3 348 aaKnown RBP12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 IFNLR1Q8IU57 520 aaPredicted RBP12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 B3GALNT2Q8NCR0 500 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 LMO3Q8TAP4 145 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 TSPAN18Q96SJ8 248 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 ABCB6Q9NP58 842 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 TBK1Q9UHD2 729 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 PCDHGC5Q9Y5F6 944 aa12.74□□□□□ -0.37
TMEM170A-205ENST00000568559 PTPRZ1P23471 2315 aaPredicted RBP12.73□□□□□ -0.37
TMEM170A-205ENST00000568559 VIMP08670 466 aaKnown RBP12.73□□□□□ -0.37
TMEM170A-205ENST00000568559 LILRA4P59901 499 aa12.73□□□□□ -0.37
TMEM170A-205ENST00000568559 ZNF268Q14587 947 aaPredicted RBP12.73□□□□□ -0.37
TMEM170A-205ENST00000568559 GEN1Q17RS7 908 aa12.73□□□□□ -0.37
TMEM170A-205ENST00000568559 PPP1R26Q5T8A7 1209 aaPredicted RBP12.73□□□□□ -0.37
TMEM170A-205ENST00000568559 KDELC2Q7Z4H8 507 aa12.73□□□□□ -0.37
TMEM170A-205ENST00000568559 USP6NLQ92738 828 aa12.73□□□□□ -0.37
TMEM170A-205ENST00000568559 AGO3Q9H9G7 860 aaKnown RBP12.73□□□□□ -0.37
TMEM170A-205ENST00000568559 AVENQ9NQS1 362 aaPredicted RBP12.73□□□□□ -0.37
TMEM170A-205ENST00000568559 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.73□□□□□ -0.37
TMEM170A-205ENST00000568559 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.73□□□□□ -0.379e-6■□□□□ 8.7
TMEM170A-205ENST00000568559 GOLGA8MH3BSY2 632 aa12.73□□□□□ -0.37
TMEM170A-205ENST00000568559 PRRG1O14668 218 aa12.73□□□□□ -0.37
TMEM170A-205ENST00000568559 ZBED1O96006 694 aa12.73□□□□□ -0.37
TMEM170A-205ENST00000568559 DNAJB2P25686 324 aa12.73□□□□□ -0.37
TMEM170A-205ENST00000568559 HOXA11P31270 313 aaPredicted RBP12.73□□□□□ -0.37
TMEM170A-205ENST00000568559 CHRNA3P32297 505 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms