RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 TUFT1Q9NNX1 390 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 HERC5Q9UII4 1024 aaKnown RBP11.37□□□□□ -0.59
PALB2-206ENST00000568219 ACTL7BQ9Y614 415 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 LAMA4Q16363 1823 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 RNF103-CHMP3A0A140T963 221 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 CSDE1O75534 798 aaKnown RBP11.37□□□□□ -0.59
PALB2-206ENST00000568219 HLA-DRAP01903 254 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 P4HBP07237 508 aaKnown RBP11.37□□□□□ -0.59
PALB2-206ENST00000568219 KRT3P12035 628 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 VCLP18206 1134 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 PEX2P28328 305 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 NRLP54845 237 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 PPP4CP60510 307 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 PSMC5P62195 406 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 RPS6P62753 249 aaKnown RBP11.37□□□□□ -0.59
PALB2-206ENST00000568219 OR6B2Q6IFH4 312 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 KLC3Q6P597 504 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 TSHZ1Q6ZSZ6 1077 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 PTAR1Q7Z6K3 402 aaPredicted RBP11.37□□□□□ -0.59
PALB2-206ENST00000568219 NAT14Q8WUY8 206 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 SEMA4DQ92854 862 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 PTPRN2Q92932 1015 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 FERMT1Q9BQL6 677 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 FOXP3Q9BZS1 431 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 COPS7BQ9H9Q2 264 aaPredicted RBP11.37□□□□□ -0.59
PALB2-206ENST00000568219 KCNMB3Q9NPA1 279 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 GINS2Q9Y248 185 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 TSC22D4Q9Y3Q8 395 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 RIMBP3CA6NJZ7 1639 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 RIMBP3BA6NNM3 1639 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 RIMBP3Q9UFD9 1639 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 ZNF335Q9H4Z2 1342 aaPredicted RBP11.37□□□□□ -0.59
PALB2-206ENST00000568219 FKBP6O75344 327 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 MCF2P10911 925 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 YWHABP31946 246 aaKnown RBP11.37□□□□□ -0.59
PALB2-206ENST00000568219 TMED10P49755 219 aaKnown RBP11.37□□□□□ -0.59
PALB2-206ENST00000568219 CDK7P50613 346 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 PKNOX1P55347 436 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 FOLH1Q04609 750 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 GAD2Q05329 585 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 TBL3Q12788 808 aaKnown RBP11.37□□□□□ -0.59
PALB2-206ENST00000568219 ANO4Q32M45 955 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 RALGPS1Q5JS13 557 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 C1orf186Q6ZWK4 172 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 NGLY1Q96IV0 654 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 NR1H4Q96RI1 486 aaPredicted RBP11.37□□□□□ -0.59
PALB2-206ENST00000568219 POLR3CQ9BUI4 534 aaPredicted RBP11.37□□□□□ -0.59
PALB2-206ENST00000568219 C20orf96Q9NUD7 363 aaPredicted RBP11.37□□□□□ -0.59
PALB2-206ENST00000568219 PI4KBQ9UBF8 816 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 C1orf167Q5SNV9 1468 aa11.37□□□□□ -0.59
PALB2-206ENST00000568219 FRMPD4Q14CM0 1322 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 K7ERI5 159 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 TBX3O15119 743 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 TM9SF1O15321 606 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 TMEM191BP0C7N4 346 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 GTF2H1P32780 548 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 AQP4P55087 323 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 ROR1Q01973 937 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 ATP1A4Q13733 1029 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 CC2D2BQ6DHV5 1058 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 DHDDSQ86SQ9 333 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 DNAAF3Q8N9W5 541 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 PHC3Q8NDX5 983 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 MCUQ8NE86 351 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 MSTO1Q9BUK6 570 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 PAIP1Q9H074 479 aaKnown RBP11.36□□□□□ -0.59
PALB2-206ENST00000568219 SEMA6AQ9H2E6 1030 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 TMEM8AQ9HCN3 771 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 LMCD1Q9NZU5 365 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 LNPEPQ9UIQ6 1025 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 APOEP02649 317 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 CHN2P52757 468 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 NCKAP1LP55160 1127 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 HDAC4P56524 1084 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 B3GNT6Q6ZMB0 384 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 SPOCD1Q6ZMY3 1216 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 HPS6Q86YV9 775 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 THNSL1Q8IYQ7 743 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 NRG4Q8WWG1 115 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 PHACTR1Q9C0D0 580 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 AKAP12Q02952 1782 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 RGPD1P0DJD0 1748 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 PRPSAP2O60256 369 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 LYPLA1O75608 230 aaPredicted RBP11.36□□□□□ -0.59
PALB2-206ENST00000568219 POLD1P28340 1107 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 ECE1P42892 770 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 SERPINB8P50452 374 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 ARHGEF16Q5VV41 709 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 UTS2BQ765I0 119 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 EXD1Q8NHP7 514 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 CMTM5Q96DZ9 223 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 KLC2Q9H0B6 622 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 ACSS2Q9NR19 701 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 IL1RAPL1Q9NZN1 696 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 SLC7A8Q9UHI5 535 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 UMODL1Q5DID0 1318 aa11.36□□□□□ -0.59
PALB2-206ENST00000568219 MEIS2O14770 477 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 MTMR1Q13613 665 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 GSTA3Q16772 222 aa11.35□□□□□ -0.59
PALB2-206ENST00000568219 PLEKHG4Q58EX7 1191 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms