RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 XIRP2A4UGR9 3374 aa19.09■□□□□ 0.65
COMMD4-222ENST00000568034 DOCK6Q96HP0 2047 aa19.08■□□□□ 0.65
COMMD4-222ENST00000568034 TPM3P06753 285 aa19.08■□□□□ 0.64
COMMD4-222ENST00000568034 TRIM21P19474 475 aaKnown RBP19.08■□□□□ 0.64
COMMD4-222ENST00000568034 GNA15P30679 374 aa19.08■□□□□ 0.64
COMMD4-222ENST00000568034 SOX5P35711 763 aa19.08■□□□□ 0.64
COMMD4-222ENST00000568034 USP8P40818 1118 aa19.08■□□□□ 0.64
COMMD4-222ENST00000568034 PLCB2Q00722 1185 aa19.08■□□□□ 0.64
COMMD4-222ENST00000568034 CLUL1Q15846 466 aa19.08■□□□□ 0.64
COMMD4-222ENST00000568034 PKDCCQ504Y2 493 aa19.08■□□□□ 0.64
COMMD4-222ENST00000568034 ELMSAN1Q6PJG2 1045 aa19.08■□□□□ 0.64
COMMD4-222ENST00000568034 GPR149Q86SP6 731 aa19.08■□□□□ 0.64
COMMD4-222ENST00000568034 SLC47A2Q86VL8 602 aa19.08■□□□□ 0.64
COMMD4-222ENST00000568034 TTC30AQ86WT1 665 aa19.08■□□□□ 0.64
COMMD4-222ENST00000568034 VSTM4Q8IW00 320 aa19.08■□□□□ 0.64
COMMD4-222ENST00000568034 STKLD1Q8NE28 680 aa19.08■□□□□ 0.64
COMMD4-222ENST00000568034 MED10Q9BTT4 135 aa19.08■□□□□ 0.64
COMMD4-222ENST00000568034 DNAI2Q9GZS0 605 aa19.08■□□□□ 0.64
COMMD4-222ENST00000568034 ADAM7Q9H2U9 754 aa19.08■□□□□ 0.64
COMMD4-222ENST00000568034 CD207Q9UJ71 328 aa19.08■□□□□ 0.64
COMMD4-222ENST00000568034 TSPAN16Q9UKR8 245 aa19.08■□□□□ 0.64
COMMD4-222ENST00000568034 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.08■□□□□ 0.64
COMMD4-222ENST00000568034 COG5Q9UP83 839 aa19.08■□□□□ 0.64
COMMD4-222ENST00000568034 PATJQ8NI35 1801 aa19.07■□□□□ 0.64
COMMD4-222ENST00000568034 ATP8B3O60423 1300 aa19.07■□□□□ 0.64
COMMD4-222ENST00000568034 NOTCH4Q99466 2003 aa19.07■□□□□ 0.64
COMMD4-222ENST00000568034 F8VP50 259 aa19.07■□□□□ 0.64
COMMD4-222ENST00000568034 AP1G2O75843 785 aa19.07■□□□□ 0.64
COMMD4-222ENST00000568034 LRG1P02750 347 aa19.07■□□□□ 0.64
COMMD4-222ENST00000568034 GYPCP04921 128 aa19.07■□□□□ 0.64
COMMD4-222ENST00000568034 FAM200BP0CF97 657 aa19.07■□□□□ 0.64
COMMD4-222ENST00000568034 ZNF75DP51815 510 aa19.07■□□□□ 0.64
COMMD4-222ENST00000568034 CNGA2Q16280 664 aa19.07■□□□□ 0.64
COMMD4-222ENST00000568034 GOLGA7BQ2TAP0 167 aa19.07■□□□□ 0.64
COMMD4-222ENST00000568034 E4F1Q66K89 784 aaPredicted RBP19.07■□□□□ 0.64
COMMD4-222ENST00000568034 LCLAT1Q6UWP7 414 aa19.07■□□□□ 0.64
COMMD4-222ENST00000568034 CLEC20AQ6ZU45 233 aa19.07■□□□□ 0.64
COMMD4-222ENST00000568034 GPIHBP1Q8IV16 184 aa19.07■□□□□ 0.64
COMMD4-222ENST00000568034 C8orf48Q96LL4 319 aa19.07■□□□□ 0.64
COMMD4-222ENST00000568034 SPAG5Q96R06 1193 aa19.07■□□□□ 0.64
COMMD4-222ENST00000568034 KCNK16Q96T55 309 aa19.07■□□□□ 0.64
COMMD4-222ENST00000568034 EDEM3Q9BZQ6 932 aa19.07■□□□□ 0.64
COMMD4-222ENST00000568034 TRIM5Q9C035 493 aa19.07■□□□□ 0.64
COMMD4-222ENST00000568034 GREB1Q4ZG55 1949 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 GRXCR2A6NFK2 248 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 SPDYE4A6NLX3 237 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 HHLA1C9JL84 531 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 TRIM66O15016 1216 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 GFPT2O94808 682 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 MICAL2O94851 1124 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 CFHP08603 1231 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 NPR3P17342 541 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 GRIK1P39086 918 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 STAT1P42224 750 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 ALDH1A3P47895 512 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 RPL10AP62906 217 aaKnown RBP19.06■□□□□ 0.64
COMMD4-222ENST00000568034 PLD1Q13393 1074 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 LEXMQ3ZCV2 418 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 CACNA2D4Q7Z3S7 1137 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 TMC8Q8IU68 726 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 SCN4BQ8IWT1 228 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 ANKRD52Q8NB46 1076 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 GPR152Q8TDT2 470 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 EPS8L1Q8TE68 723 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 GIPC2Q8TF65 315 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 ZNF606Q8WXB4 792 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 DDX1Q92499 740 aaKnown RBP19.06■□□□□ 0.64
COMMD4-222ENST00000568034 SUSD6Q92537 303 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 SMG7Q92540 1137 aaKnown RBP19.06■□□□□ 0.64
COMMD4-222ENST00000568034 PSMG2Q969U7 264 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 SPATA17Q96L03 361 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 NUP58Q9BVL2 599 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 LRRC3Q9BY71 257 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 DUSP16Q9BY84 665 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 DMAP1Q9NPF5 467 aaPredicted RBP19.06■□□□□ 0.64
COMMD4-222ENST00000568034 HCFC1R1Q9NWW0 138 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 MYO6Q9UM54 1294 aa19.06■□□□□ 0.64
COMMD4-222ENST00000568034 A0A1W2PQJ5 194 aa19.05■□□□□ 0.64
COMMD4-222ENST00000568034 LRRC53A6NM62 1247 aa19.05■□□□□ 0.64
COMMD4-222ENST00000568034 TULP2O00295 520 aa19.05■□□□□ 0.64
COMMD4-222ENST00000568034 NRG2O14511 850 aaPredicted RBP19.05■□□□□ 0.64
COMMD4-222ENST00000568034 CYP11B1P15538 503 aa19.05■□□□□ 0.64
COMMD4-222ENST00000568034 HMGA1P17096 107 aaKnown RBP19.05■□□□□ 0.64
COMMD4-222ENST00000568034 SSTR3P32745 418 aaPredicted RBP19.05■□□□□ 0.64
COMMD4-222ENST00000568034 EPHB3P54753 998 aa19.05■□□□□ 0.64
COMMD4-222ENST00000568034 MAP3K7CLP57077 242 aa19.05■□□□□ 0.64
COMMD4-222ENST00000568034 TFF2Q03403 129 aa19.05■□□□□ 0.64
COMMD4-222ENST00000568034 PTK2Q05397 1052 aa19.05■□□□□ 0.64
COMMD4-222ENST00000568034 ITIH3Q06033 890 aa19.05■□□□□ 0.64
COMMD4-222ENST00000568034 SMAD4Q13485 552 aaKnown RBP19.05■□□□□ 0.64
COMMD4-222ENST00000568034 MTMR3Q13615 1198 aa19.05■□□□□ 0.64
COMMD4-222ENST00000568034 STILQ15468 1287 aa19.05■□□□□ 0.64
COMMD4-222ENST00000568034 SPECC1LQ69YQ0 1117 aa19.05■□□□□ 0.64
COMMD4-222ENST00000568034 CYP26C1Q6V0L0 522 aa19.05■□□□□ 0.64
COMMD4-222ENST00000568034 NOP9Q86U38 636 aaKnown RBP19.05■□□□□ 0.64
COMMD4-222ENST00000568034 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.05■□□□□ 0.64
COMMD4-222ENST00000568034 DNMT3BQ9UBC3 853 aaKnown RBP19.05■□□□□ 0.64
COMMD4-222ENST00000568034 NOCTQ9UK39 431 aaKnown RBP19.05■□□□□ 0.64
COMMD4-222ENST00000568034 DENND4AQ7Z401 1863 aa19.05■□□□□ 0.64
COMMD4-222ENST00000568034 TNFRSF10BO14763 440 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms