RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 E2F7Q96AV8 911 aa5.85□□□□□ -1.47
CAPN3-217ENST00000567817 NSUN4Q96CB9 384 aaKnown RBP5.85□□□□□ -1.47
CAPN3-217ENST00000567817 HOOK2Q96ED9 719 aa5.85□□□□□ -1.47
CAPN3-217ENST00000567817 SCYL1Q96KG9 808 aa5.85□□□□□ -1.47
CAPN3-217ENST00000567817 FAM84BQ96KN1 310 aaPredicted RBP5.85□□□□□ -1.47
CAPN3-217ENST00000567817 PPP1R13BQ96KQ4 1090 aa5.85□□□□□ -1.47
CAPN3-217ENST00000567817 AIFM3Q96NN9 605 aa5.85□□□□□ -1.47
CAPN3-217ENST00000567817 GUCD1Q96NT3 240 aa5.85□□□□□ -1.47
CAPN3-217ENST00000567817 FOXB1Q99853 325 aa5.85□□□□□ -1.47
CAPN3-217ENST00000567817 MYL10Q9BUA6 226 aa5.85□□□□□ -1.47
CAPN3-217ENST00000567817 ZDHHC5Q9C0B5 715 aa5.85□□□□□ -1.47
CAPN3-217ENST00000567817 CUEDC2Q9H467 287 aa5.85□□□□□ -1.47
CAPN3-217ENST00000567817 PCIF1Q9H4Z3 704 aa5.85□□□□□ -1.47
CAPN3-217ENST00000567817 SEC61A2Q9H9S3 476 aa5.85□□□□□ -1.47
CAPN3-217ENST00000567817 ACSS2Q9NR19 701 aa5.85□□□□□ -1.47
CAPN3-217ENST00000567817 TCP11L1Q9NUJ3 509 aa5.85□□□□□ -1.47
CAPN3-217ENST00000567817 OGFRQ9NZT2 677 aa5.85□□□□□ -1.47
CAPN3-217ENST00000567817 DNAI1Q9UI46 699 aa5.85□□□□□ -1.47
CAPN3-217ENST00000567817 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.85□□□□□ -1.47
CAPN3-217ENST00000567817 ROBO3Q96MS0 1386 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 ECM29Q5VYK3 1845 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 hCG_1984214I3L0E3 225 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 PRKAB2O43741 272 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 CNOT4O95628 575 aaKnown RBP5.84□□□□□ -1.47
CAPN3-217ENST00000567817 TFRCP02786 760 aaKnown RBP5.84□□□□□ -1.47
CAPN3-217ENST00000567817 ADRB1P08588 477 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 ZNF888P0CJ79 500 aaPredicted RBP5.84□□□□□ -1.47
CAPN3-217ENST00000567817 SCG2P13521 617 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 POU3F2P20265 443 aaPredicted RBP5.84□□□□□ -1.47
CAPN3-217ENST00000567817 MAGEA10P43363 369 aaPredicted RBP5.84□□□□□ -1.47
CAPN3-217ENST00000567817 PSMC4P43686 418 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 ALDH6A1Q02252 535 aaKnown RBP5.84□□□□□ -1.47
CAPN3-217ENST00000567817 SNAPC2Q13487 334 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 PNOCQ13519 176 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 TKFCQ3LXA3 575 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 ZMAT1Q5H9K5 638 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 TTC38Q5R3I4 469 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 C17orf99Q6UX52 265 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 NOP9Q86U38 636 aaKnown RBP5.84□□□□□ -1.47
CAPN3-217ENST00000567817 DZIP1Q86YF9 867 aaKnown RBP5.84□□□□□ -1.47
CAPN3-217ENST00000567817 RAB11FIP4Q86YS3 637 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 CNGA4Q8IV77 575 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 ZNF713Q8N859 430 aaPredicted RBP5.84□□□□□ -1.47
CAPN3-217ENST00000567817 NOC3LQ8WTT2 800 aaKnown RBP5.84□□□□□ -1.47
CAPN3-217ENST00000567817 SDR42E1Q8WUS8 393 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 CCDC47Q96A33 483 aaKnown RBP5.84□□□□□ -1.47
CAPN3-217ENST00000567817 IQCDQ96DY2 449 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 AK8Q96MA6 479 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 PANX2Q96RD6 677 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 BAG1Q99933 345 aaPredicted RBP5.84□□□□□ -1.47
CAPN3-217ENST00000567817 C1QTNF1Q9BXJ1 281 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 MEGF9Q9H1U4 602 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 HSD3B7Q9H2F3 369 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 JADE2Q9NQC1 790 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 GJB4Q9NTQ9 266 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 PLAAQ9Y263 795 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 NFE2L3Q9Y4A8 694 aa5.84□□□□□ -1.47
CAPN3-217ENST00000567817 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.84□□□□□ -1.47
CAPN3-217ENST00000567817 SYNRGQ9UMZ2 1314 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 NCOR1O75376 2440 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 COL4A1P02462 1669 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 A0A0G2JNJ9 132 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 NPEPPSL1A6NEC2 478 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 TSPY2A6NKD2 308 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 EFCAB8A8MWE9 144 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 ENPP3O14638 875 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 HMGCRP04035 888 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 CYP17A1P05093 508 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 CCDC175P0C221 793 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 APEX1P27695 318 aaKnown RBP5.83□□□□□ -1.48
CAPN3-217ENST00000567817 GUCY1A2P33402 732 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 ADCY8P40145 1251 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 PRPHP41219 470 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 GYG1P46976 350 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 NLRP5P59047 1200 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 FKBP1AP62942 108 aaKnown RBP5.83□□□□□ -1.48
CAPN3-217ENST00000567817 CD83Q01151 205 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 GABPB1Q06547 395 aaPredicted RBP5.83□□□□□ -1.48
CAPN3-217ENST00000567817 TBX2Q13207 712 aaPredicted RBP5.83□□□□□ -1.48
CAPN3-217ENST00000567817 STIM1Q13586 685 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 EIF4HQ15056 248 aaKnown RBP5.83□□□□□ -1.48
CAPN3-217ENST00000567817 ZNF174Q15697 407 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 JAKMIP3Q5VZ66 844 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 GRAMD4Q6IC98 578 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 CTR9Q6PD62 1173 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 OTOP2Q7RTS6 562 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 ZNF804AQ7Z570 1209 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 CIR1Q86X95 450 aaPredicted RBP5.83□□□□□ -1.48
CAPN3-217ENST00000567817 KIF18BQ86Y91 864 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 ERO1BQ86YB8 467 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 FOXRED1Q96CU9 486 aaPredicted RBP5.83□□□□□ -1.48
CAPN3-217ENST00000567817 PAGE5Q96GU1 130 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 PARK7Q99497 189 aaKnown RBP5.83□□□□□ -1.48
CAPN3-217ENST00000567817 KRTAP4-9Q9BYQ8 210 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 ARHGAP39Q9C0H5 1083 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 CSRNP2Q9H175 543 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 KAT14Q9H8E8 782 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 SMPD4Q9NXE4 827 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 VPS54Q9P1Q0 977 aa5.83□□□□□ -1.48
CAPN3-217ENST00000567817 MYO1AQ9UBC5 1043 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms