RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 CEP57L1Q8IYX8 460 aa16.1■□□□□ 0.17
SCAMP2-209ENST00000567638 SYNPOQ8N3V7 929 aa16.1■□□□□ 0.17
SCAMP2-209ENST00000567638 RMDN1Q96DB5 314 aa16.1■□□□□ 0.17
SCAMP2-209ENST00000567638 MMS19Q96T76 1030 aa16.1■□□□□ 0.17
SCAMP2-209ENST00000567638 GZF1Q9H116 711 aaPredicted RBP16.1■□□□□ 0.17
SCAMP2-209ENST00000567638 EBF3Q9H4W6 596 aa16.1■□□□□ 0.17
SCAMP2-209ENST00000567638 RCOR1Q9UKL0 485 aa16.1■□□□□ 0.17
SCAMP2-209ENST00000567638 K7ESF4 209 aa16.09■□□□□ 0.17
SCAMP2-209ENST00000567638 TACC1O75410 805 aa16.09■□□□□ 0.17
SCAMP2-209ENST00000567638 PDGFRBP09619 1106 aa16.09■□□□□ 0.17
SCAMP2-209ENST00000567638 SLFN14P0C7P3 912 aa16.09■□□□□ 0.17
SCAMP2-209ENST00000567638 CYP27A1Q02318 531 aa16.09■□□□□ 0.17
SCAMP2-209ENST00000567638 FAM160A1Q05DH4 1040 aa16.09■□□□□ 0.17
SCAMP2-209ENST00000567638 KNOP1Q1ED39 458 aaKnown RBP16.09■□□□□ 0.17
SCAMP2-209ENST00000567638 TRIM68Q6AZZ1 485 aa16.09■□□□□ 0.17
SCAMP2-209ENST00000567638 CC2D1AQ6P1N0 951 aaPredicted RBP16.09■□□□□ 0.17
SCAMP2-209ENST00000567638 FSIP1Q8NA03 581 aa16.09■□□□□ 0.17
SCAMP2-209ENST00000567638 SPRYD3Q8NCJ5 442 aa16.09■□□□□ 0.17
SCAMP2-209ENST00000567638 SECISBP2LQ93073 1101 aaKnown RBP16.09■□□□□ 0.17
SCAMP2-209ENST00000567638 SPATA17Q96L03 361 aa16.09■□□□□ 0.17
SCAMP2-209ENST00000567638 CEP295NLQ96MC4 621 aa16.09■□□□□ 0.17
SCAMP2-209ENST00000567638 SLC22A12Q96S37 553 aa16.09■□□□□ 0.17
SCAMP2-209ENST00000567638 MRPL45Q9BRJ2 306 aaKnown RBP16.09■□□□□ 0.17
SCAMP2-209ENST00000567638 TRPC7Q9HCX4 862 aa16.09■□□□□ 0.17
SCAMP2-209ENST00000567638 SERTAD1Q9UHV2 236 aa16.09■□□□□ 0.17
SCAMP2-209ENST00000567638 DCHS1Q96JQ0 3298 aa16.09■□□□□ 0.17
SCAMP2-209ENST00000567638 SPAG17Q6Q759 2223 aa16.09■□□□□ 0.17
SCAMP2-209ENST00000567638 TRAV19A0A0A6YYK7 116 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 OTOL1A6NHN0 477 aaPredicted RBP16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 ACTN4O43707 911 aaKnown RBP16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 KLRC4O43908 158 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 EXOC3O60645 756 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 STAU1O95793 577 aaKnown RBP16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 CKMP06732 381 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 FAM163BP0C2L3 166 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 USP17L7P0C7H9 530 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 ARSAP15289 507 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 BDNFP23560 247 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 TNNC1P63316 161 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 DMWDQ09019 674 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 USP4Q13107 963 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 MTF1Q14872 753 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 PDGFRLQ15198 375 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 ZNF77Q15935 545 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 WDR72Q3MJ13 1102 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 GPR161Q8N6U8 529 aaKnown RBP16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 MYCBPAPQ8TBZ2 947 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 ZNF516Q92618 1163 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 CHFRQ96EP1 664 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 PCED1BQ96HM7 432 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 SNX25Q9H3E2 840 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 GCNT4Q9P109 453 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 NME7Q9Y5B8 376 aa16.08■□□□□ 0.16
SCAMP2-209ENST00000567638 C2orf78A6NCI8 922 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 CHURC1-FNTBB4DL54 471 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 TRIM66O15016 1216 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 ANXA13P27216 316 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 GNL1P36915 607 aaPredicted RBP16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 GRIK1P39086 918 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 FNTBP49356 437 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 MYL6P60660 151 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 TRPC3Q13507 836 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 TMEM196Q5HYL7 178 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 MDH1BQ5I0G3 518 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 FSTL4Q6MZW2 842 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 DENND5BQ6ZUT9 1274 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 ARL14EPQ8N8R7 260 aaPredicted RBP16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 OR6B3Q8NGW1 331 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 GOLGA5Q8TBA6 731 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 PAGE5Q96GU1 130 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 CYP2S1Q96SQ9 504 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 XYLT2Q9H1B5 865 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 EXOC1Q9NV70 894 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 C2orf42Q9NWW7 574 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 GMEB2Q9UKD1 530 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 RAB23Q9ULC3 237 aa16.07■□□□□ 0.16
SCAMP2-209ENST00000567638 CEP250Q9BV73 2442 aa16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 TRDMT1O14717 391 aaKnown RBP16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 PFKFB1P16118 471 aa16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 ATICP31939 592 aa16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 CASP4P49662 377 aa16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 USP46P62068 366 aa16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 AMPD2Q01433 879 aa16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 GRSF1Q12849 480 aaKnown RBP eCLIP16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 STK4Q13043 487 aa16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 KCNB1Q14721 858 aa16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 LAIR1Q6GTX8 287 aa16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 LONP2Q86WA8 852 aa16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 CPA6Q8N4T0 437 aa16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 KIAA0895Q8NCT3 520 aa16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 PLEKHO2Q8TD55 490 aa16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 OSCP1Q8WVF1 389 aa16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 SYAP1Q96A49 352 aaPredicted RBP16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 C8orf48Q96LL4 319 aa16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 TTLL2Q9BWV7 592 aa16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 DPEP3Q9H4B8 488 aa16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 EHD2Q9NZN4 543 aa16.06■□□□□ 0.16
SCAMP2-209ENST00000567638 DMXL1Q9Y485 3027 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 A0A1B0GVL5 298 aa16.05■□□□□ 0.16
SCAMP2-209ENST00000567638 A8MXQ7 604 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms