RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 TRAPPC11Q7Z392 1133 aa16.35■□□□□ 0.21
CDR2-206ENST00000567406 LIMS2Q7Z4I7 341 aa16.35■□□□□ 0.21
CDR2-206ENST00000567406 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.35■□□□□ 0.21
CDR2-206ENST00000567406 GRAMD1CQ8IYS0 662 aa16.35■□□□□ 0.21
CDR2-206ENST00000567406 GPR161Q8N6U8 529 aaKnown RBP16.35■□□□□ 0.21
CDR2-206ENST00000567406 SPRYD3Q8NCJ5 442 aa16.35■□□□□ 0.21
CDR2-206ENST00000567406 ELMO3Q96BJ8 720 aa16.35■□□□□ 0.21
CDR2-206ENST00000567406 TRMT2BQ96GJ1 504 aaKnown RBP16.35■□□□□ 0.21
CDR2-206ENST00000567406 MYRFLQ96LU7 910 aa16.35■□□□□ 0.21
CDR2-206ENST00000567406 LINC00597Q9H2U6 94 aa16.35■□□□□ 0.21
CDR2-206ENST00000567406 DUS2Q9NX74 493 aaKnown RBP16.35■□□□□ 0.21
CDR2-206ENST00000567406 UXTQ9UBK9 157 aaPredicted RBP16.35■□□□□ 0.21
CDR2-206ENST00000567406 CDV3Q9UKY7 258 aaKnown RBP16.35■□□□□ 0.21
CDR2-206ENST00000567406 ANAPC1Q9H1A4 1944 aa16.35■□□□□ 0.21
CDR2-206ENST00000567406 TRAV19A0A0A6YYK7 116 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 ANTXRLA6NF34 631 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 TRDMT1O14717 391 aaKnown RBP16.34■□□□□ 0.21
CDR2-206ENST00000567406 AXIN1O15169 862 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 GDF9O60383 454 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 RNF40O75150 1001 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 CKMP06732 381 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 RETP07949 1114 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 TNNI1P19237 187 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 GJA4P35212 333 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 GRIK1P39086 918 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 AFMP43652 599 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 ZXDBP98169 803 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 ZNF77Q15935 545 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 SNRNP35Q16560 246 aaKnown RBP16.34■□□□□ 0.21
CDR2-206ENST00000567406 MDH1BQ5I0G3 518 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 WDR5BQ86VZ2 330 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 WDR49Q8IV35 697 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 SYNPOQ8N3V7 929 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 FAM160A2Q8N612 972 aaPredicted RBP16.34■□□□□ 0.21
CDR2-206ENST00000567406 IQUBQ8NA54 791 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 SCFD1Q8WVM8 642 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 ZNF516Q92618 1163 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 C7orf25Q9BPX7 421 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 LRRC27Q9C0I9 530 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 DPEP3Q9H4B8 488 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 ECT2Q9H8V3 914 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 KIF9Q9HAQ2 790 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 SLC39A2Q9NP94 309 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 GCNT4Q9P109 453 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 ZMYM5Q9UJ78 669 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 CDH9Q9ULB4 789 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 GREB1Q4ZG55 1949 aa16.34■□□□□ 0.21
CDR2-206ENST00000567406 SCAMP3O14828 347 aaKnown RBP16.33■□□□□ 0.2
CDR2-206ENST00000567406 KIAA0391O15091 583 aaKnown RBP16.33■□□□□ 0.2
CDR2-206ENST00000567406 EIF3DO15371 548 aaKnown RBP eCLIP16.33■□□□□ 0.2
CDR2-206ENST00000567406 YEATS4O95619 227 aa16.33■□□□□ 0.2
CDR2-206ENST00000567406 USP17L7P0C7H9 530 aa16.33■□□□□ 0.2
CDR2-206ENST00000567406 WARSP23381 471 aaKnown RBP16.33■□□□□ 0.2
CDR2-206ENST00000567406 GNL1P36915 607 aaPredicted RBP16.33■□□□□ 0.2
CDR2-206ENST00000567406 CASP4P49662 377 aa16.33■□□□□ 0.2
CDR2-206ENST00000567406 CACNA2D1P54289 1103 aa16.33■□□□□ 0.2
CDR2-206ENST00000567406 AMPD3Q01432 767 aa16.33■□□□□ 0.2
CDR2-206ENST00000567406 LMNB2Q03252 620 aa16.33■□□□□ 0.2
CDR2-206ENST00000567406 FAM160A1Q05DH4 1040 aa16.33■□□□□ 0.2
CDR2-206ENST00000567406 CYP24A1Q07973 514 aa16.33■□□□□ 0.2
CDR2-206ENST00000567406 CUL4BQ13620 913 aa16.33■□□□□ 0.2
CDR2-206ENST00000567406 PKP1Q13835 747 aa16.33■□□□□ 0.2
CDR2-206ENST00000567406 ZNF268Q14587 947 aaPredicted RBP16.33■□□□□ 0.2
CDR2-206ENST00000567406 SURF1Q15526 300 aa16.33■□□□□ 0.2
CDR2-206ENST00000567406 C4orf50Q6ZRC1 276 aa16.33■□□□□ 0.2
CDR2-206ENST00000567406 DPH6Q7L8W6 267 aa16.33■□□□□ 0.2
CDR2-206ENST00000567406 OR6B3Q8NGW1 331 aa16.33■□□□□ 0.2
CDR2-206ENST00000567406 SH3RF2Q8TEC5 729 aa16.33■□□□□ 0.2
CDR2-206ENST00000567406 EZH1Q92800 747 aaPredicted RBP16.33■□□□□ 0.2
CDR2-206ENST00000567406 PCED1BQ96HM7 432 aa16.33■□□□□ 0.2
CDR2-206ENST00000567406 FUBP3Q96I24 572 aaKnown RBP eCLIP16.33■□□□□ 0.2
CDR2-206ENST00000567406 HHIPQ96QV1 700 aa16.33■□□□□ 0.2
CDR2-206ENST00000567406 GZF1Q9H116 711 aaPredicted RBP16.33■□□□□ 0.2
CDR2-206ENST00000567406 CUEDC2Q9H467 287 aa16.33■□□□□ 0.2
CDR2-206ENST00000567406 SEMA4GQ9NTN9 838 aa16.33■□□□□ 0.2
CDR2-206ENST00000567406 PCDHA7Q9UN72 937 aa16.33■□□□□ 0.2
CDR2-206ENST00000567406 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.32■□□□□ 0.2
CDR2-206ENST00000567406 PRR5-ARHGAP8B1AHC4 643 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 CLDN5O00501 218 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 HDCP19113 662 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 MAGEA11P43364 429 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 IFNAR2P48551 515 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 MYL6P60660 151 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 ARHGAP8P85298 464 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 USP4Q13107 963 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 PSMD6Q15008 389 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 PDGFRLQ15198 375 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 EML3Q32P44 896 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 UNC13DQ70J99 1090 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 HS2ST1Q7LGA3 356 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 SPATA18Q8TC71 538 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 PLEKHO2Q8TD55 490 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 OSCP1Q8WVF1 389 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 FNBP1Q96RU3 617 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 CGRRF1Q99675 332 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 P2RY13Q9BPV8 354 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 SNX25Q9H3E2 840 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 KIAA1586Q9HCI6 787 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 TMEM30AQ9NV96 361 aa16.32■□□□□ 0.2
CDR2-206ENST00000567406 NXF1Q9UBU9 619 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms