RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 TAF6P49848 677 aa12.12□□□□□ -0.47
SPG7-216ENST00000567138 SLC12A3P55017 1021 aa12.12□□□□□ -0.47
SPG7-216ENST00000567138 SEC13P55735 322 aa12.12□□□□□ -0.47
SPG7-216ENST00000567138 KRT85P78386 507 aa12.12□□□□□ -0.47
SPG7-216ENST00000567138 GRIN1Q05586 938 aa12.12□□□□□ -0.47
SPG7-216ENST00000567138 USP4Q13107 963 aa12.12□□□□□ -0.47
SPG7-216ENST00000567138 ACAP1Q15027 740 aa12.12□□□□□ -0.47
SPG7-216ENST00000567138 ZNF77Q15935 545 aa12.12□□□□□ -0.47
SPG7-216ENST00000567138 KYAT1Q16773 422 aa12.12□□□□□ -0.47
SPG7-216ENST00000567138 SLC39A4Q6P5W5 647 aa12.12□□□□□ -0.47
SPG7-216ENST00000567138 MON1AQ86VX9 555 aa12.12□□□□□ -0.47
SPG7-216ENST00000567138 THEM5Q8N1Q8 247 aa12.12□□□□□ -0.47
SPG7-216ENST00000567138 CDK5RAP3Q96JB5 506 aa12.12□□□□□ -0.47
SPG7-216ENST00000567138 SLC22A12Q96S37 553 aa12.12□□□□□ -0.47
SPG7-216ENST00000567138 DUS2Q9NX74 493 aaKnown RBP12.12□□□□□ -0.47
SPG7-216ENST00000567138 LARSQ9P2J5 1176 aaKnown RBP12.12□□□□□ -0.47
SPG7-216ENST00000567138 FBXO2Q9UK22 296 aaPredicted RBP12.12□□□□□ -0.47
SPG7-216ENST00000567138 CPSF3Q9UKF6 684 aaKnown RBP12.12□□□□□ -0.47
SPG7-216ENST00000567138 RCOR1Q9UKL0 485 aa12.12□□□□□ -0.47
SPG7-216ENST00000567138 PCDHB5Q9Y5E4 795 aa12.12□□□□□ -0.47
SPG7-216ENST00000567138 MORC2Q9Y6X9 1032 aaPredicted RBP12.12□□□□□ -0.47
SPG7-216ENST00000567138 ANKRD11Q6UB99 2663 aaPredicted RBP12.12□□□□□ -0.47
SPG7-216ENST00000567138 ADAMTS20P59510 1910 aa12.12□□□□□ -0.47
SPG7-216ENST00000567138 WDFY3Q8IZQ1 3526 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 A0A0B4J269 797 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 PRPF40AO75400 957 aaKnown RBP12.11□□□□□ -0.47
SPG7-216ENST00000567138 PIGRP01833 764 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 CSH1P0DML2 217 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 CSH2P0DML3 217 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 CEACAM1P13688 526 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 CSRP1P21291 193 aaKnown RBP12.11□□□□□ -0.47
SPG7-216ENST00000567138 PAX3P23760 479 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 ACOT2P49753 483 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 IRX4P78413 519 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 ZNF268Q14587 947 aaPredicted RBP12.11□□□□□ -0.47
SPG7-216ENST00000567138 USP39Q53GS9 565 aaKnown RBP12.11□□□□□ -0.47
SPG7-216ENST00000567138 ARSHQ5FYA8 562 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 ANO7Q6IWH7 933 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 TTC30AQ86WT1 665 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 CD302Q8IX05 232 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 DCP1BQ8IZD4 617 aaKnown RBP12.11□□□□□ -0.47
SPG7-216ENST00000567138 OSCP1Q8WVF1 389 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 PIGKQ92643 395 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 ATP2A3Q93084 1043 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 EXOC4Q96A65 974 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 CLIC6Q96NY7 704 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 TSPAN18Q96SJ8 248 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 REEP2Q9BRK0 252 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 KCND2Q9NZV8 630 aa12.11□□□□□ -0.47
SPG7-216ENST00000567138 SRPRBQ9Y5M8 271 aaKnown RBP12.11□□□□□ -0.47
SPG7-216ENST00000567138 TISP43B9A030 160 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 HYAL3O43820 417 aaPredicted RBP12.1□□□□□ -0.47
SPG7-216ENST00000567138 PPP6R2O75170 966 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 CKMP06732 381 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 FAM160A1Q05DH4 1040 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 SMARCB1Q12824 385 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 DHX8Q14562 1220 aaKnown RBP12.1□□□□□ -0.47
SPG7-216ENST00000567138 DDR2Q16832 855 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 CCDC142Q17RM4 750 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 EML3Q32P44 896 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 TMEM119Q4V9L6 283 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 ZC2HC1CQ53FD0 456 aaPredicted RBP12.1□□□□□ -0.47
SPG7-216ENST00000567138 C2orf27AQ580R0 203 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 ARMCX6Q7L4S7 300 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 GPBP1Q86WP2 473 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 EFCAB13Q8IY85 973 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 MDGA1Q8NFP4 955 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 USP33Q8TEY7 942 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 LEO1Q8WVC0 666 aaPredicted RBP12.1□□□□□ -0.47
SPG7-216ENST00000567138 SPATA32Q96LK8 384 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 CYP2S1Q96SQ9 504 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 SCAND2PQ9GZW5 306 aaPredicted RBP12.1□□□□□ -0.47
SPG7-216ENST00000567138 DPP3Q9NY33 737 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 LHX6Q9UPM6 363 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 DERAQ9Y315 318 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 ATXN2Q99700 1313 aaKnown RBP12.1□□□□□ -0.47
SPG7-216ENST00000567138 NBEAQ8NFP9 2946 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 DMXL2Q8TDJ6 3036 aa12.1□□□□□ -0.47
SPG7-216ENST00000567138 PCDH15Q96QU1 1955 aa12.09□□□□□ -0.47
SPG7-216ENST00000567138 TRAV19A0A0A6YYK7 116 aa12.09□□□□□ -0.47
SPG7-216ENST00000567138 ANKRD63C9JTQ0 380 aa12.09□□□□□ -0.47
SPG7-216ENST00000567138 FAM13AO94988 1023 aa12.09□□□□□ -0.47
SPG7-216ENST00000567138 USP17L7P0C7H9 530 aa12.09□□□□□ -0.47
SPG7-216ENST00000567138 ACAT1P24752 427 aaKnown RBP12.09□□□□□ -0.47
SPG7-216ENST00000567138 CYP2F1P24903 491 aa12.09□□□□□ -0.47
SPG7-216ENST00000567138 LONP1P36776 959 aaKnown RBP12.09□□□□□ -0.47
SPG7-216ENST00000567138 MAPK8P45983 427 aa12.09□□□□□ -0.47
SPG7-216ENST00000567138 TSPY1Q01534 308 aa12.09□□□□□ -0.47
SPG7-216ENST00000567138 RING1Q06587 406 aa12.09□□□□□ -0.47
SPG7-216ENST00000567138 C11orf74Q86VG3 221 aa12.09□□□□□ -0.47
SPG7-216ENST00000567138 RASSF3Q86WH2 238 aa12.09□□□□□ -0.47
SPG7-216ENST00000567138 CCDC33Q8N5R6 958 aa12.09□□□□□ -0.47
SPG7-216ENST00000567138 MYCT1Q8N699 235 aa12.09□□□□□ -0.47
SPG7-216ENST00000567138 ARL14EPQ8N8R7 260 aaPredicted RBP12.09□□□□□ -0.47
SPG7-216ENST00000567138 RLN3Q8WXF3 142 aa12.09□□□□□ -0.47
SPG7-216ENST00000567138 CNOT6LQ96LI5 555 aaKnown RBP12.09□□□□□ -0.47
SPG7-216ENST00000567138 AK8Q96MA6 479 aa12.09□□□□□ -0.47
SPG7-216ENST00000567138 FAM117AQ9C073 453 aa12.09□□□□□ -0.47
SPG7-216ENST00000567138 CCSER1Q9C0I3 900 aa12.09□□□□□ -0.47
SPG7-216ENST00000567138 ZHX3Q9H4I2 956 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms