RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 STK33Q9BYT3 514 aa17.76■□□□□ 0.43
CLN6-208ENST00000567060 EDEM3Q9BZQ6 932 aa17.76■□□□□ 0.43
CLN6-208ENST00000567060 ELOVL4Q9GZR5 314 aa17.76■□□□□ 0.43
CLN6-208ENST00000567060 MAN1C1Q9NR34 630 aa17.76■□□□□ 0.43
CLN6-208ENST00000567060 DNAJC12Q9UKB3 198 aa17.76■□□□□ 0.43
CLN6-208ENST00000567060 GVINP1Q7Z2Y8 2422 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 PRRG1O14668 218 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 ZMYND10O75800 440 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 ASGR2P07307 311 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 EPCAMP16422 314 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 ACAT1P24752 427 aaKnown RBP17.75■□□□□ 0.43
CLN6-208ENST00000567060 BPIFB4P59827 614 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 ITIH3Q06033 890 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 MTMR3Q13615 1198 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 MEA1Q16626 185 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 FIGNQ5HY92 759 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 RNF19BQ6ZMZ0 732 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 RRAGAQ7L523 313 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 LRRTM3Q86VH5 581 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 FEZF2Q8TBJ5 459 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 PCMTD1Q96MG8 357 aaPredicted RBP17.75■□□□□ 0.43
CLN6-208ENST00000567060 KREMEN1Q96MU8 473 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 NAP1L5Q96NT1 182 aaPredicted RBP17.75■□□□□ 0.43
CLN6-208ENST00000567060 NAA15Q9BXJ9 866 aaKnown RBP17.75■□□□□ 0.43
CLN6-208ENST00000567060 GANQ9H2C0 597 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 CRTAC1Q9NQ79 661 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.75■□□□□ 0.435e-7■■■■■ 90.8
CLN6-208ENST00000567060 CEP72Q9P209 647 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 GTF3C4Q9UKN8 822 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 MYO6Q9UM54 1294 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 ASB3Q9Y575 518 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 NME7Q9Y5B8 376 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 PCDHB4Q9Y5E5 795 aa17.75■□□□□ 0.43
CLN6-208ENST00000567060 DMXL1Q9Y485 3027 aa17.74■□□□□ 0.43
CLN6-208ENST00000567060 MYBPHLA2RUH7 354 aa17.74■□□□□ 0.43
CLN6-208ENST00000567060 C8AP07357 584 aa17.74■□□□□ 0.43
CLN6-208ENST00000567060 OR4Q2P0C623 313 aa17.74■□□□□ 0.43
CLN6-208ENST00000567060 VDRP11473 427 aa17.74■□□□□ 0.43
CLN6-208ENST00000567060 ZNF132P52740 706 aa17.74■□□□□ 0.43
CLN6-208ENST00000567060 RAD23BP54727 409 aa17.74■□□□□ 0.43
CLN6-208ENST00000567060 RPL10AP62906 217 aaKnown RBP17.74■□□□□ 0.43
CLN6-208ENST00000567060 PPM1LQ5SGD2 360 aa17.74■□□□□ 0.43
CLN6-208ENST00000567060 ARHGAP17Q68EM7 881 aa17.74■□□□□ 0.43
CLN6-208ENST00000567060 TMEM270Q6UE05 265 aa17.74■□□□□ 0.43
CLN6-208ENST00000567060 ELMO3Q96BJ8 720 aa17.74■□□□□ 0.43
CLN6-208ENST00000567060 PCED1BQ96HM7 432 aa17.74■□□□□ 0.43
CLN6-208ENST00000567060 NECTIN4Q96NY8 510 aa17.74■□□□□ 0.43
CLN6-208ENST00000567060 TMEM209Q96SK2 561 aa17.74■□□□□ 0.43
CLN6-208ENST00000567060 HNRNPABQ99729 332 aaKnown RBP17.74■□□□□ 0.43
CLN6-208ENST00000567060 CYP4F11Q9HBI6 524 aa17.74■□□□□ 0.43
CLN6-208ENST00000567060 LIMD1Q9UGP4 676 aa17.74■□□□□ 0.43
CLN6-208ENST00000567060 INSL5Q9Y5Q6 135 aa17.74■□□□□ 0.43
CLN6-208ENST00000567060 FRYLO94915 3013 aa17.74■□□□□ 0.43
CLN6-208ENST00000567060 ITIH6Q6UXX5 1313 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 PTPRDP23468 1912 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 SPDYE4A6NLX3 237 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 TRIM66O15016 1216 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 TEX33O43247 280 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 XYLBO75191 536 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 LRG1P02750 347 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 HAPLN1P10915 354 aaPredicted RBP17.73■□□□□ 0.43
CLN6-208ENST00000567060 ALDH1A3P47895 512 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 PSMC1P62191 440 aaKnown RBP17.73■□□□□ 0.43
CLN6-208ENST00000567060 MDH1BQ5I0G3 518 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 ASTLQ6HA08 431 aaPredicted RBP17.73■□□□□ 0.43
CLN6-208ENST00000567060 IQCEQ6IPM2 695 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 CES5AQ6NT32 575 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 ACOT1Q86TX2 421 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 ELMOD1Q8N336 334 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 C12orf76Q8N812 135 aaPredicted RBP17.73■□□□□ 0.43
CLN6-208ENST00000567060 SLC4A11Q8NBS3 891 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 LEMD2Q8NC56 503 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 MYLPFQ96A32 169 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 SMARCD1Q96GM5 515 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 HEXIM2Q96MH2 286 aaKnown RBP17.73■□□□□ 0.43
CLN6-208ENST00000567060 RBSNQ9H1K0 784 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 DPEP3Q9H4B8 488 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 FAM207AQ9NSI2 230 aaPredicted RBP17.73■□□□□ 0.43
CLN6-208ENST00000567060 EHD2Q9NZN4 543 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 IFNKQ9P0W0 207 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 ZNF292O60281 2723 aa17.73■□□□□ 0.43
CLN6-208ENST00000567060 NOL4O94818 638 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 CCDC172P0C7W6 258 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 PBX1P40424 430 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 DUSP4Q13115 394 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 VEPH1Q14D04 833 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 SGO2Q562F6 1265 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 ITIH5Q86UX2 942 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 GAS2L3Q86XJ1 694 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 FAM71AQ8IYT1 594 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 ZDHHC14Q8IZN3 488 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 ATAD1Q8NBU5 361 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 RBBP8NLQ8NC74 664 aaPredicted RBP17.72■□□□□ 0.43
CLN6-208ENST00000567060 SLC7A14Q8TBB6 771 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 KAT5Q92993 513 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 CYFIP2Q96F07 1278 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 PGLYRP2Q96PD5 576 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 SPAG5Q96R06 1193 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 TWNKQ96RR1 684 aa17.72■□□□□ 0.43
CLN6-208ENST00000567060 PRKD2Q9BZL6 878 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms